RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 FANCIQ9NVI1 1328 aa16.19■□□□□ 0.18
HLA-DQB1-203ENST00000399082 UBR3Q6ZT12 1888 aa16.18■□□□□ 0.18
HLA-DQB1-203ENST00000399082 GIGYF1O75420 1035 aaPredicted RBP16.18■□□□□ 0.18
HLA-DQB1-203ENST00000399082 AMIGO3Q86WK7 504 aa16.18■□□□□ 0.18
HLA-DQB1-203ENST00000399082 CDCA7LQ96GN5 454 aa16.18■□□□□ 0.18
HLA-DQB1-203ENST00000399082 CYP19A1P11511 503 aaPredicted RBP16.17■□□□□ 0.18
HLA-DQB1-203ENST00000399082 USP16Q9Y5T5 823 aa16.17■□□□□ 0.18
HLA-DQB1-203ENST00000399082 QSER1Q2KHR3 1735 aa16.16■□□□□ 0.18
HLA-DQB1-203ENST00000399082 ZBED9Q6R2W3 1325 aa16.16■□□□□ 0.18
HLA-DQB1-203ENST00000399082 CNTNAP4Q9C0A0 1308 aa16.16■□□□□ 0.18
HLA-DQB1-203ENST00000399082 SNRPA1P09661 255 aaKnown RBP16.15■□□□□ 0.18
HLA-DQB1-203ENST00000399082 GOLGA2Q08379 1002 aa16.15■□□□□ 0.18
HLA-DQB1-203ENST00000399082 SLFN5Q08AF3 891 aa16.15■□□□□ 0.18
HLA-DQB1-203ENST00000399082 INTS5Q6P9B9 1019 aaKnown RBP16.15■□□□□ 0.18
HLA-DQB1-203ENST00000399082 SMIM5Q71RC9 77 aa16.15■□□□□ 0.18
HLA-DQB1-203ENST00000399082 TRMT2AQ8IZ69 625 aaKnown RBP16.15■□□□□ 0.18
HLA-DQB1-203ENST00000399082 C8orf58Q8NAV2 365 aa16.15■□□□□ 0.18
HLA-DQB1-203ENST00000399082 CRKLP46109 303 aaKnown RBP16.14■□□□□ 0.17
HLA-DQB1-203ENST00000399082 TSPYL6Q8N831 410 aa16.14■□□□□ 0.17
HLA-DQB1-203ENST00000399082 SLC15A2Q16348 729 aa16.13■□□□□ 0.17
HLA-DQB1-203ENST00000399082 ZBTB1Q9Y2K1 713 aa16.13■□□□□ 0.17
HLA-DQB1-203ENST00000399082 CASZ1Q86V15 1759 aa16.13■□□□□ 0.17
HLA-DQB1-203ENST00000399082 E9PSI1 815 aa16.12■□□□□ 0.17
HLA-DQB1-203ENST00000399082 RC3H1Q5TC82 1133 aaKnown RBP16.12■□□□□ 0.17
HLA-DQB1-203ENST00000399082 DUSP27Q5VZP5 1158 aa16.12■□□□□ 0.17
HLA-DQB1-203ENST00000399082 C4AP0C0L4 1744 aa16.11■□□□□ 0.17
HLA-DQB1-203ENST00000399082 NBPF26B4DH59 902 aa16.11■□□□□ 0.17
HLA-DQB1-203ENST00000399082 A1BGP04217 495 aa16.11■□□□□ 0.17
HLA-DQB1-203ENST00000399082 EXOSC9Q06265 439 aaKnown RBP16.11■□□□□ 0.17
HLA-DQB1-203ENST00000399082 NBPF14Q5TI25 921 aa16.11■□□□□ 0.17
HLA-DQB1-203ENST00000399082 NBPF10Q6P3W6 841 aaKnown RBP16.11■□□□□ 0.17
HLA-DQB1-203ENST00000399082 NBPF15Q8N660 670 aa16.11■□□□□ 0.17
HLA-DQB1-203ENST00000399082 TEX13AQ9BXU3 409 aaPredicted RBP16.11■□□□□ 0.17
HLA-DQB1-203ENST00000399082 MYH16Q9H6N6 1097 aa16.11■□□□□ 0.17
HLA-DQB1-203ENST00000399082 CCDC87Q9NVE4 849 aa16.11■□□□□ 0.17
HLA-DQB1-203ENST00000399082 STK32BQ9NY57 414 aa16.11■□□□□ 0.17
HLA-DQB1-203ENST00000399082 PNPLA7Q6ZV29 1317 aa16.11■□□□□ 0.17
HLA-DQB1-203ENST00000399082 ELL2O00472 640 aaPredicted RBP16.1■□□□□ 0.17
HLA-DQB1-203ENST00000399082 HOXB7P09629 217 aa16.1■□□□□ 0.17
HLA-DQB1-203ENST00000399082 PIP4K2AP48426 406 aaPredicted RBP16.1■□□□□ 0.17
HLA-DQB1-203ENST00000399082 PDGFDQ9GZP0 370 aaPredicted RBP16.1■□□□□ 0.17
HLA-DQB1-203ENST00000399082 SOS1Q07889 1333 aaPredicted RBP16.1■□□□□ 0.17
HLA-DQB1-203ENST00000399082 GNPATO15228 680 aa16.09■□□□□ 0.17
HLA-DQB1-203ENST00000399082 RPS6KA4O75676 772 aa16.09■□□□□ 0.17
HLA-DQB1-203ENST00000399082 STARD3NLO95772 234 aa16.09■□□□□ 0.17
HLA-DQB1-203ENST00000399082 R3HDM1Q15032 1099 aaKnown RBP16.09■□□□□ 0.17
HLA-DQB1-203ENST00000399082 PDIA6Q15084 440 aa16.09■□□□□ 0.17
HLA-DQB1-203ENST00000399082 LRP10Q7Z4F1 713 aa16.09■□□□□ 0.17
HLA-DQB1-203ENST00000399082 AK7Q96M32 723 aa16.09■□□□□ 0.17
HLA-DQB1-203ENST00000399082 PSDA5PKW4 1024 aaPredicted RBP16.08■□□□□ 0.16
HLA-DQB1-203ENST00000399082 PROSER3Q2NL68 480 aa16.08■□□□□ 0.16
HLA-DQB1-203ENST00000399082 VAMP4O75379 141 aa16.07■□□□□ 0.16
HLA-DQB1-203ENST00000399082 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB1-203ENST00000399082 CANXP27824 592 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB1-203ENST00000399082 EIF5P55010 431 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB1-203ENST00000399082 TWISTNBQ3B726 338 aaPredicted RBP16.07■□□□□ 0.16
HLA-DQB1-203ENST00000399082 NECTIN2Q92692 538 aa16.07■□□□□ 0.16
HLA-DQB1-203ENST00000399082 TFCP2L1Q9NZI6 479 aa16.07■□□□□ 0.16
HLA-DQB1-203ENST00000399082 COL15A1P39059 1388 aa16.06■□□□□ 0.16
HLA-DQB1-203ENST00000399082 ERBB4Q15303 1308 aa16.06■□□□□ 0.16
HLA-DQB1-203ENST00000399082 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.06■□□□□ 0.16
HLA-DQB1-203ENST00000399082 PHF14O94880 888 aa16.06■□□□□ 0.16
HLA-DQB1-203ENST00000399082 ANXA1P04083 346 aa16.06■□□□□ 0.16
HLA-DQB1-203ENST00000399082 SSFA2P28290 1259 aa16.06■□□□□ 0.16
HLA-DQB1-203ENST00000399082 HDGFL1Q5TGJ6 251 aa16.06■□□□□ 0.16
HLA-DQB1-203ENST00000399082 COL23A1Q86Y22 540 aaPredicted RBP16.06■□□□□ 0.16
HLA-DQB1-203ENST00000399082 YTHDC1Q96MU7 727 aaKnown RBP16.06■□□□□ 0.16
HLA-DQB1-203ENST00000399082 IL6STP40189 918 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB1-203ENST00000399082 CHPF2Q9P2E5 772 aa16.05■□□□□ 0.16
HLA-DQB1-203ENST00000399082 RTCBQ9Y3I0 505 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-203ENST00000399082 BCORQ6W2J9 1755 aa16.05■□□□□ 0.16
HLA-DQB1-203ENST00000399082 SCN7AQ01118 1682 aa16.05■□□□□ 0.16
HLA-DQB1-203ENST00000399082 HMGB2P26583 209 aaKnown RBP16.04■□□□□ 0.16
HLA-DQB1-203ENST00000399082 ARHGEF1Q92888 912 aaKnown RBP16.04■□□□□ 0.16
HLA-DQB1-203ENST00000399082 COL24A1Q17RW2 1714 aa16.04■□□□□ 0.16
HLA-DQB1-203ENST00000399082 TCERG1O14776 1098 aaKnown RBP16.03■□□□□ 0.16
HLA-DQB1-203ENST00000399082 DDX21Q9NR30 783 aaKnown RBP eCLIP16.03■□□□□ 0.16
HLA-DQB1-203ENST00000399082 U3KPZ7 1027 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQB1-203ENST00000399082 MYL6BP14649 208 aa16.02■□□□□ 0.16
HLA-DQB1-203ENST00000399082 SRP68Q9UHB9 627 aaKnown RBP16.02■□□□□ 0.16
HLA-DQB1-203ENST00000399082 USP42Q9H9J4 1324 aaKnown RBP16.01■□□□□ 0.15
HLA-DQB1-203ENST00000399082 TRAPPC3LQ5T215 181 aa16.01■□□□□ 0.15
HLA-DQB1-203ENST00000399082 BCL2L12Q9HB09 334 aa16.01■□□□□ 0.15
HLA-DQB1-203ENST00000399082 CCDC30Q5VVM6 783 aa16■□□□□ 0.15
HLA-DQB1-203ENST00000399082 TTLL7Q6ZT98 887 aa16■□□□□ 0.15
HLA-DQB1-203ENST00000399082 FLAD1Q8NFF5 587 aa16■□□□□ 0.15
HLA-DQB1-203ENST00000399082 DBF4Q9UBU7 674 aaPredicted RBP16■□□□□ 0.15
HLA-DQB1-203ENST00000399082 ZNF330Q9Y3S2 320 aaPredicted RBP16■□□□□ 0.15
HLA-DQB1-203ENST00000399082 CAMTA2O94983 1202 aa15.99■□□□□ 0.15
HLA-DQB1-203ENST00000399082 PHAXQ9H814 394 aaKnown RBP15.99■□□□□ 0.15
HLA-DQB1-203ENST00000399082 TBC1D2BQ9UPU7 963 aa15.99■□□□□ 0.15
HLA-DQB1-203ENST00000399082 CACNA1FO60840 1977 aa15.98■□□□□ 0.15
HLA-DQB1-203ENST00000399082 GYS1P13807 737 aa15.98■□□□□ 0.15
HLA-DQB1-203ENST00000399082 USPL1Q5W0Q7 1092 aa15.98■□□□□ 0.15
HLA-DQB1-203ENST00000399082 G2E3Q7L622 706 aa15.98■□□□□ 0.15
HLA-DQB1-203ENST00000399082 DZIP3Q86Y13 1208 aaKnown RBP15.98■□□□□ 0.15
HLA-DQB1-203ENST00000399082 XAGE3Q8WTP9 111 aa15.98■□□□□ 0.15
HLA-DQB1-203ENST00000399082 NARFQ9UHQ1 456 aa15.98■□□□□ 0.15
HLA-DQB1-203ENST00000399082 ZBTB7AO95365 584 aa15.97■□□□□ 0.15
HLA-DQB1-203ENST00000399082 RFC4P35249 363 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms