RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 COL24A1Q17RW2 1714 aa18.57■□□□□ 0.56
HLA-DQB1-202ENST00000399079 PRAMEF22A3QJZ6 481 aa18.57■□□□□ 0.56
HLA-DQB1-202ENST00000399079 ADRA2BP18089 450 aa18.57■□□□□ 0.56
HLA-DQB1-202ENST00000399079 RFC4P35249 363 aa18.57■□□□□ 0.56
HLA-DQB1-202ENST00000399079 SYT17Q9BSW7 474 aa18.57■□□□□ 0.56
HLA-DQB1-202ENST00000399079 KLHL34Q8N239 644 aa18.56■□□□□ 0.56
HLA-DQB1-202ENST00000399079 STARD3NLO95772 234 aa18.55■□□□□ 0.56
HLA-DQB1-202ENST00000399079 CANXP27824 592 aaKnown RBP18.55■□□□□ 0.56
HLA-DQB1-202ENST00000399079 MRS2Q9HD23 443 aa18.55■□□□□ 0.56
HLA-DQB1-202ENST00000399079 SRP68Q9UHB9 627 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB1-202ENST00000399079 USP16Q9Y5T5 823 aa18.54■□□□□ 0.56
HLA-DQB1-202ENST00000399079 SOS1Q07889 1333 aaPredicted RBP18.54■□□□□ 0.56
HLA-DQB1-202ENST00000399079 GYS1P13807 737 aa18.54■□□□□ 0.56
HLA-DQB1-202ENST00000399079 TEX13AQ9BXU3 409 aaPredicted RBP18.54■□□□□ 0.56
HLA-DQB1-202ENST00000399079 TRIM35Q9UPQ4 493 aa18.54■□□□□ 0.56
HLA-DQB1-202ENST00000399079 APAF1O14727 1248 aa18.53■□□□□ 0.56
HLA-DQB1-202ENST00000399079 A1BGP04217 495 aa18.53■□□□□ 0.56
HLA-DQB1-202ENST00000399079 PNISRQ8TF01 805 aaKnown RBP18.53■□□□□ 0.56
HLA-DQB1-202ENST00000399079 C4AP0C0L4 1744 aa18.52■□□□□ 0.56
HLA-DQB1-202ENST00000399079 SNRPA1P09661 255 aaKnown RBP18.52■□□□□ 0.56
HLA-DQB1-202ENST00000399079 LMOD3Q0VAK6 560 aa18.52■□□□□ 0.56
HLA-DQB1-202ENST00000399079 USP42Q9H9J4 1324 aaKnown RBP18.51■□□□□ 0.55
HLA-DQB1-202ENST00000399079 SENP3-EIF4A1A0A087X0R7 540 aa18.51■□□□□ 0.55
HLA-DQB1-202ENST00000399079 PIP4K2AP48426 406 aaPredicted RBP18.51■□□□□ 0.55
HLA-DQB1-202ENST00000399079 COL15A1P39059 1388 aa18.51■□□□□ 0.55
HLA-DQB1-202ENST00000399079 MMP10P09238 476 aa18.5■□□□□ 0.55
HLA-DQB1-202ENST00000399079 EIF4A1P60842 406 aaKnown RBP18.5■□□□□ 0.55
HLA-DQB1-202ENST00000399079 NLGN1Q8N2Q7 840 aa18.5■□□□□ 0.55
HLA-DQB1-202ENST00000399079 ZNF330Q9Y3S2 320 aaPredicted RBP18.5■□□□□ 0.55
HLA-DQB1-202ENST00000399079 EIF5P55010 431 aaKnown RBP18.49■□□□□ 0.55
HLA-DQB1-202ENST00000399079 FKBP8Q14318 412 aa18.49■□□□□ 0.55
HLA-DQB1-202ENST00000399079 NLGN2Q8NFZ4 835 aa18.49■□□□□ 0.55
HLA-DQB1-202ENST00000399079 TSPYL4Q9UJ04 414 aa18.49■□□□□ 0.55
HLA-DQB1-202ENST00000399079 ZPR1O75312 459 aa18.49■□□□□ 0.55
HLA-DQB1-202ENST00000399079 USPL1Q5W0Q7 1092 aa18.49■□□□□ 0.55
HLA-DQB1-202ENST00000399079 KDM3BQ7LBC6 1761 aa18.49■□□□□ 0.55
HLA-DQB1-202ENST00000399079 GIGYF1O75420 1035 aaPredicted RBP18.48■□□□□ 0.55
HLA-DQB1-202ENST00000399079 NARFQ9UHQ1 456 aa18.48■□□□□ 0.55
HLA-DQB1-202ENST00000399079 IL6STP40189 918 aaPredicted RBP18.47■□□□□ 0.55
HLA-DQB1-202ENST00000399079 LAS1LQ9Y4W2 734 aaKnown RBP18.47■□□□□ 0.55
HLA-DQB1-202ENST00000399079 BCL2L12Q9HB09 334 aa18.46■□□□□ 0.55
HLA-DQB1-202ENST00000399079 TBC1D2BQ9UPU7 963 aa18.46■□□□□ 0.55
HLA-DQB1-202ENST00000399079 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
HLA-DQB1-202ENST00000399079 CHL1O00533 1208 aa18.44■□□□□ 0.54
HLA-DQB1-202ENST00000399079 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
HLA-DQB1-202ENST00000399079 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
HLA-DQB1-202ENST00000399079 DDR1Q08345 913 aa18.44■□□□□ 0.54
HLA-DQB1-202ENST00000399079 BABAM1Q9NWV8 329 aa18.44■□□□□ 0.54
HLA-DQB1-202ENST00000399079 CD2APQ9Y5K6 639 aa18.44■□□□□ 0.54
HLA-DQB1-202ENST00000399079 PARP3Q9Y6F1 533 aa18.44■□□□□ 0.54
HLA-DQB1-202ENST00000399079 A0A087WZG4 1122 aa18.43■□□□□ 0.54
HLA-DQB1-202ENST00000399079 TM4SF1P30408 202 aa18.43■□□□□ 0.54
HLA-DQB1-202ENST00000399079 NPM2Q86SE8 214 aaKnown RBP18.43■□□□□ 0.54
HLA-DQB1-202ENST00000399079 FAM9BQ8IZU0 186 aa18.43■□□□□ 0.54
HLA-DQB1-202ENST00000399079 KRT24Q2M2I5 525 aa18.42■□□□□ 0.54
HLA-DQB1-202ENST00000399079 NFIXQ14938 502 aa18.41■□□□□ 0.54
HLA-DQB1-202ENST00000399079 DZIP3Q86Y13 1208 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB1-202ENST00000399079 CFAP44Q96MT7 982 aa18.41■□□□□ 0.54
HLA-DQB1-202ENST00000399079 POLRMTO00411 1230 aaKnown RBP18.4■□□□□ 0.54
HLA-DQB1-202ENST00000399079 BICDL1Q6ZP65 573 aa18.4■□□□□ 0.54
HLA-DQB1-202ENST00000399079 PELP1Q8IZL8 1130 aaKnown RBP18.4■□□□□ 0.54
HLA-DQB1-202ENST00000399079 DCAF8L1A6NGE4 600 aa18.39■□□□□ 0.54
HLA-DQB1-202ENST00000399079 CAMTA2O94983 1202 aa18.39■□□□□ 0.54
HLA-DQB1-202ENST00000399079 EIF2S2P20042 333 aaKnown RBP18.39■□□□□ 0.54
HLA-DQB1-202ENST00000399079 NGEFQ8N5V2 710 aa18.39■□□□□ 0.54
HLA-DQB1-202ENST00000399079 MBIPQ9NS73 344 aa18.39■□□□□ 0.54
HLA-DQB1-202ENST00000399079 WWC3Q9ULE0 1092 aa18.39■□□□□ 0.54
HLA-DQB1-202ENST00000399079 LAMB4A4D0S4 1761 aa18.39■□□□□ 0.53
HLA-DQB1-202ENST00000399079 MYL6BP14649 208 aa18.39■□□□□ 0.53
HLA-DQB1-202ENST00000399079 GPR162Q16538 588 aa18.39■□□□□ 0.53
HLA-DQB1-202ENST00000399079 TBC1D9BQ66K14 1250 aa18.39■□□□□ 0.53
HLA-DQB1-202ENST00000399079 ZNF853P0CG23 659 aa18.38■□□□□ 0.53
HLA-DQB1-202ENST00000399079 NECTIN2Q92692 538 aa18.38■□□□□ 0.53
HLA-DQB1-202ENST00000399079 SALL2Q9Y467 1007 aaPredicted RBP18.38■□□□□ 0.53
HLA-DQB1-202ENST00000399079 WWC1Q8IX03 1113 aa18.37■□□□□ 0.53
HLA-DQB1-202ENST00000399079 C10orf71Q711Q0 1435 aa18.36■□□□□ 0.53
HLA-DQB1-202ENST00000399079 IFT57Q9NWB7 429 aa18.36■□□□□ 0.53
HLA-DQB1-202ENST00000399079 SCN7AQ01118 1682 aa18.35■□□□□ 0.53
HLA-DQB1-202ENST00000399079 A0A0G2JLW4 131 aa18.35■□□□□ 0.53
HLA-DQB1-202ENST00000399079 ANXA1P04083 346 aa18.35■□□□□ 0.53
HLA-DQB1-202ENST00000399079 SERPINB2P05120 415 aa18.35■□□□□ 0.53
HLA-DQB1-202ENST00000399079 YBX3P16989 372 aaKnown RBP eCLIP18.35■□□□□ 0.53
HLA-DQB1-202ENST00000399079 GNAI1P63096 354 aa18.35■□□□□ 0.53
HLA-DQB1-202ENST00000399079 CALD1Q05682 793 aaKnown RBP18.35■□□□□ 0.53
HLA-DQB1-202ENST00000399079 PDIA6Q15084 440 aa18.35■□□□□ 0.53
HLA-DQB1-202ENST00000399079 CCDC27Q2M243 656 aa18.34■□□□□ 0.53
HLA-DQB1-202ENST00000399079 PROSER3Q2NL68 480 aa18.34■□□□□ 0.53
HLA-DQB1-202ENST00000399079 TTLL7Q6ZT98 887 aa18.34■□□□□ 0.53
HLA-DQB1-202ENST00000399079 PXDNLA1KZ92 1463 aa18.33■□□□□ 0.53
HLA-DQB1-202ENST00000399079 HLFQ16534 295 aa18.33■□□□□ 0.53
HLA-DQB1-202ENST00000399079 DPEP1P16444 411 aa18.33■□□□□ 0.52
HLA-DQB1-202ENST00000399079 TGFB2P61812 414 aa18.33■□□□□ 0.52
HLA-DQB1-202ENST00000399079 DUSP27Q5VZP5 1158 aa18.33■□□□□ 0.52
HLA-DQB1-202ENST00000399079 LRP10Q7Z4F1 713 aa18.33■□□□□ 0.52
HLA-DQB1-202ENST00000399079 KIF13BQ9NQT8 1826 aa18.32■□□□□ 0.52
HLA-DQB1-202ENST00000399079 ERBB4Q15303 1308 aa18.32■□□□□ 0.52
HLA-DQB1-202ENST00000399079 ELL2O00472 640 aaPredicted RBP18.32■□□□□ 0.52
HLA-DQB1-202ENST00000399079 CLEC4GQ6UXB4 293 aa18.32■□□□□ 0.52
HLA-DQB1-202ENST00000399079 SETDB2Q96T68 719 aa18.32■□□□□ 0.52
HLA-DQB1-202ENST00000399079 BCORQ6W2J9 1755 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms