RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 CCDC87Q9NVE4 849 aa20.63■□□□□ 0.89
MBD1-207ENST00000398488 GIGYF1O75420 1035 aaPredicted RBP20.63■□□□□ 0.89
MBD1-207ENST00000398488 SNRPA1P09661 255 aaKnown RBP20.63■□□□□ 0.89
MBD1-207ENST00000398488 PIP4K2AP48426 406 aaPredicted RBP20.63■□□□□ 0.89
MBD1-207ENST00000398488 CFAP44Q96MT7 982 aa20.63■□□□□ 0.89
MBD1-207ENST00000398488 MBIPQ9NS73 344 aa20.63■□□□□ 0.89
MBD1-207ENST00000398488 BABAM1Q9NWV8 329 aa20.63■□□□□ 0.89
MBD1-207ENST00000398488 ATF5Q9Y2D1 282 aaPredicted RBP20.63■□□□□ 0.89
MBD1-207ENST00000398488 MSH5O43196 834 aa20.61■□□□□ 0.89
MBD1-207ENST00000398488 SSFA2P28290 1259 aa20.61■□□□□ 0.89
MBD1-207ENST00000398488 NCBP3Q53F19 620 aaKnown RBP20.61■□□□□ 0.89
MBD1-207ENST00000398488 ARHGEF1Q92888 912 aaKnown RBP20.61■□□□□ 0.89
MBD1-207ENST00000398488 SPINK5Q9NQ38 1064 aaPredicted RBP20.61■□□□□ 0.89
MBD1-207ENST00000398488 RTCBQ9Y3I0 505 aaKnown RBP20.61■□□□□ 0.89
MBD1-207ENST00000398488 CANXP27824 592 aaKnown RBP20.6■□□□□ 0.89
MBD1-207ENST00000398488 IFT57Q9NWB7 429 aa20.6■□□□□ 0.89
MBD1-207ENST00000398488 SOS1Q07889 1333 aaPredicted RBP20.6■□□□□ 0.89
MBD1-207ENST00000398488 STARD3NLO95772 234 aa20.59■□□□□ 0.89
MBD1-207ENST00000398488 TEX13AQ9BXU3 409 aaPredicted RBP20.59■□□□□ 0.89
MBD1-207ENST00000398488 NBPF26B4DH59 902 aa20.58■□□□□ 0.89
MBD1-207ENST00000398488 MSL1Q68DK7 614 aa20.58■□□□□ 0.89
MBD1-207ENST00000398488 NBPF10Q6P3W6 841 aaKnown RBP20.58■□□□□ 0.89
MBD1-207ENST00000398488 NBPF15Q8N660 670 aa20.58■□□□□ 0.89
MBD1-207ENST00000398488 TSR2Q969E8 191 aaKnown RBP20.58■□□□□ 0.89
MBD1-207ENST00000398488 ZNF521Q96K83 1311 aa20.58■□□□□ 0.88
MBD1-207ENST00000398488 HMGB2P26583 209 aaKnown RBP20.58■□□□□ 0.88
MBD1-207ENST00000398488 PTGER2P43116 358 aa20.58■□□□□ 0.88
MBD1-207ENST00000398488 TRAPPC3LQ5T215 181 aa20.58■□□□□ 0.88
MBD1-207ENST00000398488 SRP68Q9UHB9 627 aaKnown RBP20.58■□□□□ 0.88
MBD1-207ENST00000398488 GNAI1P63096 354 aa20.57■□□□□ 0.88
MBD1-207ENST00000398488 FLAD1Q8NFF5 587 aa20.57■□□□□ 0.88
MBD1-207ENST00000398488 SGIP1Q9BQI5 828 aa20.57■□□□□ 0.88
MBD1-207ENST00000398488 MTFR1LQ9H019 292 aa20.57■□□□□ 0.88
MBD1-207ENST00000398488 C4AP0C0L4 1744 aa20.57■□□□□ 0.88
MBD1-207ENST00000398488 EIF5P55010 431 aaKnown RBP20.56■□□□□ 0.88
MBD1-207ENST00000398488 LAMB4A4D0S4 1761 aa20.55■□□□□ 0.88
MBD1-207ENST00000398488 CALD1Q05682 793 aaKnown RBP20.55■□□□□ 0.88
MBD1-207ENST00000398488 C8orf58Q8NAV2 365 aa20.55■□□□□ 0.88
MBD1-207ENST00000398488 SPON1Q9HCB6 807 aa20.55■□□□□ 0.88
MBD1-207ENST00000398488 WDR63Q8IWG1 891 aa20.54■□□□□ 0.88
MBD1-207ENST00000398488 SLC16A10Q8TF71 515 aa20.54■□□□□ 0.88
MBD1-207ENST00000398488 NECTIN2Q92692 538 aa20.54■□□□□ 0.88
MBD1-207ENST00000398488 IL16Q14005 1332 aa20.54■□□□□ 0.88
MBD1-207ENST00000398488 COL15A1P39059 1388 aa20.54■□□□□ 0.88
MBD1-207ENST00000398488 COL24A1Q17RW2 1714 aa20.53■□□□□ 0.88
MBD1-207ENST00000398488 ADRA2BP18089 450 aa20.53■□□□□ 0.88
MBD1-207ENST00000398488 EIF2S2P20042 333 aaKnown RBP20.53■□□□□ 0.88
MBD1-207ENST00000398488 LRP5O75197 1615 aa20.53■□□□□ 0.88
MBD1-207ENST00000398488 ELL2O00472 640 aaPredicted RBP20.53■□□□□ 0.88
MBD1-207ENST00000398488 GYS1P13807 737 aa20.53■□□□□ 0.88
MBD1-207ENST00000398488 TSPYL6Q8N831 410 aa20.53■□□□□ 0.88
MBD1-207ENST00000398488 RFC4P35249 363 aa20.52■□□□□ 0.87
MBD1-207ENST00000398488 IL6STP40189 918 aaPredicted RBP20.52■□□□□ 0.87
MBD1-207ENST00000398488 PDIA6Q15084 440 aa20.52■□□□□ 0.87
MBD1-207ENST00000398488 PROSER3Q2NL68 480 aa20.52■□□□□ 0.87
MBD1-207ENST00000398488 DUSP27Q5VZP5 1158 aa20.52■□□□□ 0.87
MBD1-207ENST00000398488 BCL2L12Q9HB09 334 aa20.52■□□□□ 0.87
MBD1-207ENST00000398488 ZNF330Q9Y3S2 320 aaPredicted RBP20.52■□□□□ 0.87
MBD1-207ENST00000398488 ANXA1P04083 346 aa20.51■□□□□ 0.87
MBD1-207ENST00000398488 USPL1Q5W0Q7 1092 aa20.51■□□□□ 0.87
MBD1-207ENST00000398488 TBC1D2BQ9UPU7 963 aa20.51■□□□□ 0.87
MBD1-207ENST00000398488 USP42Q9H9J4 1324 aaKnown RBP20.51■□□□□ 0.87
MBD1-207ENST00000398488 FANCIQ9NVI1 1328 aa20.51■□□□□ 0.87
MBD1-207ENST00000398488 LRP10Q7Z4F1 713 aa20.5■□□□□ 0.87
MBD1-207ENST00000398488 NGEFQ8N5V2 710 aa20.5■□□□□ 0.87
MBD1-207ENST00000398488 FKBP8Q14318 412 aa20.49■□□□□ 0.87
MBD1-207ENST00000398488 MYL6BP14649 208 aa20.48■□□□□ 0.87
MBD1-207ENST00000398488 CDCA7LQ96GN5 454 aa20.48■□□□□ 0.87
MBD1-207ENST00000398488 NARFQ9UHQ1 456 aa20.48■□□□□ 0.87
MBD1-207ENST00000398488 CAMTA2O94983 1202 aa20.46■□□□□ 0.87
MBD1-207ENST00000398488 TTLL7Q6ZT98 887 aa20.46■□□□□ 0.87
MBD1-207ENST00000398488 EXOSC9Q06265 439 aaKnown RBP20.45■□□□□ 0.86
MBD1-207ENST00000398488 HDGFL1Q5TGJ6 251 aa20.45■□□□□ 0.86
MBD1-207ENST00000398488 DZIP3Q86Y13 1208 aaKnown RBP20.45■□□□□ 0.86
MBD1-207ENST00000398488 ARXQ96QS3 562 aa20.45■□□□□ 0.86
MBD1-207ENST00000398488 CHPF2Q9P2E5 772 aa20.45■□□□□ 0.86
MBD1-207ENST00000398488 A0A087WZG4 1122 aa20.44■□□□□ 0.86
MBD1-207ENST00000398488 ZPR1O75312 459 aa20.44■□□□□ 0.86
MBD1-207ENST00000398488 MMP10P09238 476 aa20.44■□□□□ 0.86
MBD1-207ENST00000398488 HOXB7P09629 217 aa20.44■□□□□ 0.86
MBD1-207ENST00000398488 TCERG1O14776 1098 aaKnown RBP20.43■□□□□ 0.86
MBD1-207ENST00000398488 DDR1Q08345 913 aa20.43■□□□□ 0.86
MBD1-207ENST00000398488 GOLGA2Q08379 1002 aa20.43■□□□□ 0.86
MBD1-207ENST00000398488 SLFN5Q08AF3 891 aa20.43■□□□□ 0.86
MBD1-207ENST00000398488 ERBB4Q15303 1308 aa20.43■□□□□ 0.86
MBD1-207ENST00000398488 TM4SF1P30408 202 aa20.43■□□□□ 0.86
MBD1-207ENST00000398488 HNRNPUQ00839 825 aaKnown RBP eCLIP20.43■□□□□ 0.86
MBD1-207ENST00000398488 NLGN1Q8N2Q7 840 aa20.43■□□□□ 0.86
MBD1-207ENST00000398488 SCN7AQ01118 1682 aa20.42■□□□□ 0.86
MBD1-207ENST00000398488 POLD1P28340 1107 aa20.42■□□□□ 0.86
MBD1-207ENST00000398488 HLFQ16534 295 aa20.42■□□□□ 0.86
MBD1-207ENST00000398488 TWISTNBQ3B726 338 aaPredicted RBP20.42■□□□□ 0.86
MBD1-207ENST00000398488 DDX21Q9NR30 783 aaKnown RBP eCLIP20.42■□□□□ 0.86
MBD1-207ENST00000398488 VAMP4O75379 141 aa20.41■□□□□ 0.86
MBD1-207ENST00000398488 NFIXQ14938 502 aa20.41■□□□□ 0.86
MBD1-207ENST00000398488 TBC1D9BQ66K14 1250 aa20.41■□□□□ 0.86
MBD1-207ENST00000398488 BCORQ6W2J9 1755 aa20.41■□□□□ 0.86
MBD1-207ENST00000398488 TRMT2AQ8IZ69 625 aaKnown RBP20.4■□□□□ 0.86
MBD1-207ENST00000398488 MYH16Q9H6N6 1097 aa20.4■□□□□ 0.86
MBD1-207ENST00000398488 PPP1R1BQ9UD71 204 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms