RNA–Protein interactions for RNA: ENST00000398455.3

HIGD1C-201, Transcript of HIG1 hypoxia inducible domain family member 1C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1C, Length 371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1C-201ENST00000398455 SPATA31C1P0DKV0 1188 aa6.83□□□□□ -1.32
HIGD1C-201ENST00000398455 PDIA4P13667 645 aaKnown RBP6.83□□□□□ -1.32
HIGD1C-201ENST00000398455 CCDC9Q9Y3X0 531 aaKnown RBP6.83□□□□□ -1.32
HIGD1C-201ENST00000398455 COL17A1Q9UMD9 1497 aaPredicted RBP6.83□□□□□ -1.32
HIGD1C-201ENST00000398455 MCCD1P59942 119 aaPredicted RBP6.82□□□□□ -1.32
HIGD1C-201ENST00000398455 SLC27A3Q5K4L6 730 aa6.82□□□□□ -1.32
HIGD1C-201ENST00000398455 NBPF10Q6P3W6 841 aaKnown RBP6.82□□□□□ -1.32
HIGD1C-201ENST00000398455 NBPF15Q8N660 670 aa6.82□□□□□ -1.32
HIGD1C-201ENST00000398455 ZNF592Q92610 1267 aa6.82□□□□□ -1.32
HIGD1C-201ENST00000398455 GPAMQ9HCL2 828 aa6.82□□□□□ -1.32
HIGD1C-201ENST00000398455 TIMMDC1Q9NPL8 285 aa6.82□□□□□ -1.32
HIGD1C-201ENST00000398455 CEP126Q9P2H0 1117 aa6.82□□□□□ -1.32
HIGD1C-201ENST00000398455 PHF24Q9UPV7 400 aa6.82□□□□□ -1.32
HIGD1C-201ENST00000398455 NEURL1BA8MQ27 555 aa6.81□□□□□ -1.32
HIGD1C-201ENST00000398455 CTBSQ01459 385 aa6.81□□□□□ -1.32
HIGD1C-201ENST00000398455 CHSY3Q70JA7 882 aa6.81□□□□□ -1.32
HIGD1C-201ENST00000398455 RNF135Q8IUD6 432 aa6.81□□□□□ -1.32
HIGD1C-201ENST00000398455 CCDC82Q8N4S0 544 aa6.81□□□□□ -1.32
HIGD1C-201ENST00000398455 GIGYF1O75420 1035 aaPredicted RBP6.8□□□□□ -1.32
HIGD1C-201ENST00000398455 CCDC97Q96F63 343 aaPredicted RBP6.8□□□□□ -1.32
HIGD1C-201ENST00000398455 CYLDQ9NQC7 956 aa6.8□□□□□ -1.32
HIGD1C-201ENST00000398455 SERPINA10Q9UK55 444 aa6.8□□□□□ -1.32
HIGD1C-201ENST00000398455 GPC1P35052 558 aa6.79□□□□□ -1.32
HIGD1C-201ENST00000398455 NBPF20Q3BBV1 942 aa6.79□□□□□ -1.32
HIGD1C-201ENST00000398455 SLFNL1Q499Z3 407 aa6.79□□□□□ -1.32
HIGD1C-201ENST00000398455 UCN2Q96RP3 112 aa6.79□□□□□ -1.32
HIGD1C-201ENST00000398455 KRTAP4-11Q9BYQ6 195 aa6.79□□□□□ -1.32
HIGD1C-201ENST00000398455 A0A1W2PRU2 124 aa6.78□□□□□ -1.32
HIGD1C-201ENST00000398455 PIK3CDO00329 1044 aa6.78□□□□□ -1.32
HIGD1C-201ENST00000398455 UBAP2LQ14157 1087 aaKnown RBP6.78□□□□□ -1.32
HIGD1C-201ENST00000398455 PHTF2Q8N3S3 785 aa6.78□□□□□ -1.32
HIGD1C-201ENST00000398455 ABHD17AQ96GS6 310 aa6.78□□□□□ -1.32
HIGD1C-201ENST00000398455 TFIP11Q9UBB9 837 aaKnown RBP6.78□□□□□ -1.32
HIGD1C-201ENST00000398455 PALM3A6NDB9 673 aaPredicted RBP6.77□□□□□ -1.33
HIGD1C-201ENST00000398455 ATP5J2-PTCD1G3V325 749 aa6.77□□□□□ -1.33
HIGD1C-201ENST00000398455 TBC1D9Q6ZT07 1266 aa6.77□□□□□ -1.33
HIGD1C-201ENST00000398455 PPP1R12CQ9BZL4 782 aa6.77□□□□□ -1.33
HIGD1C-201ENST00000398455 GRIP2Q9C0E4 1043 aa6.77□□□□□ -1.33
HIGD1C-201ENST00000398455 FAM229AH3BQW9 127 aa6.76□□□□□ -1.33
HIGD1C-201ENST00000398455 APBA3O96018 575 aa6.76□□□□□ -1.33
HIGD1C-201ENST00000398455 SKIP12755 728 aa6.76□□□□□ -1.33
HIGD1C-201ENST00000398455 TSGA10IPQ3SY00 556 aa6.76□□□□□ -1.33
HIGD1C-201ENST00000398455 RNF20Q5VTR2 975 aa6.76□□□□□ -1.33
HIGD1C-201ENST00000398455 ESPNB1AK53 854 aa6.75□□□□□ -1.33
HIGD1C-201ENST00000398455 FGFR3P22607 806 aa6.75□□□□□ -1.33
HIGD1C-201ENST00000398455 RFX1P22670 979 aa6.75□□□□□ -1.33
HIGD1C-201ENST00000398455 SPATA31C2B4DYI2 1134 aa6.74□□□□□ -1.33
HIGD1C-201ENST00000398455 ATP9BO43861 1147 aa6.74□□□□□ -1.33
HIGD1C-201ENST00000398455 LMOD1P29536 600 aaPredicted RBP6.74□□□□□ -1.33
HIGD1C-201ENST00000398455 TAS1R3Q7RTX0 852 aa6.74□□□□□ -1.33
HIGD1C-201ENST00000398455 SEPT12Q8IYM1 358 aa6.74□□□□□ -1.33
HIGD1C-201ENST00000398455 NFATC2IPQ8NCF5 419 aa6.74□□□□□ -1.33
HIGD1C-201ENST00000398455 NLRP3Q96P20 1036 aa6.74□□□□□ -1.33
HIGD1C-201ENST00000398455 CCDC85AQ96PX6 553 aaPredicted RBP6.74□□□□□ -1.33
HIGD1C-201ENST00000398455 KRTAP4-5Q9BYR2 181 aa6.74□□□□□ -1.33
HIGD1C-201ENST00000398455 WASLO00401 505 aaPredicted RBP6.73□□□□□ -1.33
HIGD1C-201ENST00000398455 ARAFP10398 606 aa6.73□□□□□ -1.33
HIGD1C-201ENST00000398455 ELNP15502 786 aa6.73□□□□□ -1.33
HIGD1C-201ENST00000398455 PHKA2P46019 1235 aa6.73□□□□□ -1.33
HIGD1C-201ENST00000398455 CFAP70Q5T0N1 1121 aa6.73□□□□□ -1.33
HIGD1C-201ENST00000398455 DEPDC4Q8N2C3 294 aa6.73□□□□□ -1.33
HIGD1C-201ENST00000398455 PLPP7Q8NBV4 271 aa6.73□□□□□ -1.33
HIGD1C-201ENST00000398455 RUBCNLQ9H714 662 aa6.73□□□□□ -1.33
HIGD1C-201ENST00000398455 CHIC2Q9UKJ5 165 aa6.73□□□□□ -1.33
HIGD1C-201ENST00000398455 ATXN7L1Q9ULK2 861 aaPredicted RBP6.73□□□□□ -1.33
HIGD1C-201ENST00000398455 USP17L5A8MUK1 530 aa6.72□□□□□ -1.33
HIGD1C-201ENST00000398455 BNIP3LO60238 219 aa6.72□□□□□ -1.33
HIGD1C-201ENST00000398455 H2AFB1P0C5Y9 115 aa6.72□□□□□ -1.33
HIGD1C-201ENST00000398455 H2AFB2P0C5Z0 115 aa6.72□□□□□ -1.33
HIGD1C-201ENST00000398455 MAP7D1Q3KQU3 841 aa6.72□□□□□ -1.33
HIGD1C-201ENST00000398455 PRRT3Q5FWE3 981 aa6.72□□□□□ -1.33
HIGD1C-201ENST00000398455 CDCA7Q9BWT1 371 aaPredicted RBP6.72□□□□□ -1.33
HIGD1C-201ENST00000398455 KLF15Q9UIH9 416 aa6.72□□□□□ -1.33
HIGD1C-201ENST00000398455 DOLKQ9UPQ8 538 aa6.72□□□□□ -1.33
HIGD1C-201ENST00000398455 PCDHB11Q9Y5F2 797 aa6.72□□□□□ -1.33
HIGD1C-201ENST00000398455 MAFBQ9Y5Q3 323 aaPredicted RBP6.72□□□□□ -1.33
HIGD1C-201ENST00000398455 NCOA4Q13772 614 aa6.71□□□□□ -1.34
HIGD1C-201ENST00000398455 OXLD1Q5BKU9 147 aa6.71□□□□□ -1.34
HIGD1C-201ENST00000398455 WDR44Q5JSH3 913 aa6.71□□□□□ -1.34
HIGD1C-201ENST00000398455 CCDC125Q86Z20 511 aa6.71□□□□□ -1.34
HIGD1C-201ENST00000398455 TRAIPQ9BWF2 469 aa6.71□□□□□ -1.34
HIGD1C-201ENST00000398455 RNF114Q9Y508 228 aa6.71□□□□□ -1.34
HIGD1C-201ENST00000398455 USP17L3A6NCW0 530 aa6.7□□□□□ -1.34
HIGD1C-201ENST00000398455 USP17L4A6NCW7 530 aa6.7□□□□□ -1.34
HIGD1C-201ENST00000398455 GRIK4Q16099 956 aa6.7□□□□□ -1.34
HIGD1C-201ENST00000398455 CDCA8Q53HL2 280 aa6.7□□□□□ -1.34
HIGD1C-201ENST00000398455 USP17L2Q6R6M4 530 aa6.7□□□□□ -1.34
HIGD1C-201ENST00000398455 USP17L1Q7RTZ2 530 aa6.7□□□□□ -1.34
HIGD1C-201ENST00000398455 FCHSD1Q86WN1 690 aa6.7□□□□□ -1.34
HIGD1C-201ENST00000398455 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.69□□□□□ -1.34
HIGD1C-201ENST00000398455 USP4Q13107 963 aa6.69□□□□□ -1.34
HIGD1C-201ENST00000398455 EML3Q32P44 896 aa6.69□□□□□ -1.34
HIGD1C-201ENST00000398455 PLEKHM2Q8IWE5 1019 aa6.69□□□□□ -1.34
HIGD1C-201ENST00000398455 TRIM52Q96A61 297 aa6.69□□□□□ -1.34
HIGD1C-201ENST00000398455 NDFIP2Q9NV92 336 aa6.69□□□□□ -1.34
HIGD1C-201ENST00000398455 LZTS3O60299 673 aaPredicted RBP6.68□□□□□ -1.34
HIGD1C-201ENST00000398455 TAL1P17542 331 aaPredicted RBP6.68□□□□□ -1.34
HIGD1C-201ENST00000398455 SCTRP47872 440 aa6.68□□□□□ -1.34
HIGD1C-201ENST00000398455 IRAK1P51617 712 aa6.68□□□□□ -1.34
HIGD1C-201ENST00000398455 VRTNQ9H8Y1 702 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms