RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 INTS5Q6P9B9 1019 aaKnown RBP33.04■■■□□ 2.88
TMEM55B-202ENST00000398020 TEX13AQ9BXU3 409 aaPredicted RBP33.04■■■□□ 2.88
TMEM55B-202ENST00000398020 GIGYF1O75420 1035 aaPredicted RBP33.03■■■□□ 2.88
TMEM55B-202ENST00000398020 STARD3NLO95772 234 aa33.03■■■□□ 2.88
TMEM55B-202ENST00000398020 WDR63Q8IWG1 891 aa33.02■■■□□ 2.88
TMEM55B-202ENST00000398020 TSR2Q969E8 191 aaKnown RBP33.02■■■□□ 2.88
TMEM55B-202ENST00000398020 CCDC87Q9NVE4 849 aa33.02■■■□□ 2.88
TMEM55B-202ENST00000398020 QSER1Q2KHR3 1735 aa33.01■■■□□ 2.87
TMEM55B-202ENST00000398020 ZBTB1Q9Y2K1 713 aa33.01■■■□□ 2.87
TMEM55B-202ENST00000398020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33■■■□□ 2.87
TMEM55B-202ENST00000398020 MSH5O43196 834 aa33■■■□□ 2.87
TMEM55B-202ENST00000398020 IL16Q14005 1332 aa33■■■□□ 2.87
TMEM55B-202ENST00000398020 ZNF521Q96K83 1311 aa33■■■□□ 2.87
TMEM55B-202ENST00000398020 RTCBQ9Y3I0 505 aaKnown RBP33■■■□□ 2.87
TMEM55B-202ENST00000398020 COL23A1Q86Y22 540 aaPredicted RBP32.99■■■□□ 2.87
TMEM55B-202ENST00000398020 SPINK5Q9NQ38 1064 aaPredicted RBP32.99■■■□□ 2.87
TMEM55B-202ENST00000398020 SRCAPQ6ZRS2 3230 aa32.99■■■□□ 2.87
TMEM55B-202ENST00000398020 CASZ1Q86V15 1759 aa32.99■■■□□ 2.87
TMEM55B-202ENST00000398020 A1BGP04217 495 aa32.98■■■□□ 2.87
TMEM55B-202ENST00000398020 CANXP27824 592 aaKnown RBP32.98■■■□□ 2.87
TMEM55B-202ENST00000398020 LAMB4A4D0S4 1761 aa32.98■■■□□ 2.87
TMEM55B-202ENST00000398020 RPS6KA4O75676 772 aa32.97■■■□□ 2.87
TMEM55B-202ENST00000398020 PIP4K2AP48426 406 aaPredicted RBP32.97■■■□□ 2.87
TMEM55B-202ENST00000398020 SSFA2P28290 1259 aa32.96■■■□□ 2.87
TMEM55B-202ENST00000398020 HNRNPUQ00839 825 aaKnown RBP eCLIP32.95■■■□□ 2.87
TMEM55B-202ENST00000398020 ZBTB7AO95365 584 aa32.94■■■□□ 2.86
TMEM55B-202ENST00000398020 ELL2O00472 640 aaPredicted RBP32.93■■■□□ 2.86
TMEM55B-202ENST00000398020 TRAPPC3LQ5T215 181 aa32.93■■■□□ 2.86
TMEM55B-202ENST00000398020 FLAD1Q8NFF5 587 aa32.93■■■□□ 2.86
TMEM55B-202ENST00000398020 ZNF330Q9Y3S2 320 aaPredicted RBP32.93■■■□□ 2.86
TMEM55B-202ENST00000398020 FANCIQ9NVI1 1328 aa32.92■■■□□ 2.86
TMEM55B-202ENST00000398020 EIF2S2P20042 333 aaKnown RBP32.92■■■□□ 2.86
TMEM55B-202ENST00000398020 ARHGEF1Q92888 912 aaKnown RBP32.92■■■□□ 2.86
TMEM55B-202ENST00000398020 SOS1Q07889 1333 aaPredicted RBP32.92■■■□□ 2.86
TMEM55B-202ENST00000398020 NECTIN2Q92692 538 aa32.91■■■□□ 2.86
TMEM55B-202ENST00000398020 DUSP27Q5VZP5 1158 aa32.91■■■□□ 2.86
TMEM55B-202ENST00000398020 C8orf58Q8NAV2 365 aa32.91■■■□□ 2.86
TMEM55B-202ENST00000398020 NBPF26B4DH59 902 aa32.89■■■□□ 2.86
TMEM55B-202ENST00000398020 GOLGA2Q08379 1002 aa32.89■■■□□ 2.86
TMEM55B-202ENST00000398020 NBPF10Q6P3W6 841 aaKnown RBP32.89■■■□□ 2.86
TMEM55B-202ENST00000398020 NBPF15Q8N660 670 aa32.89■■■□□ 2.86
TMEM55B-202ENST00000398020 C4AP0C0L4 1744 aa32.89■■■□□ 2.85
TMEM55B-202ENST00000398020 COL15A1P39059 1388 aa32.88■■■□□ 2.85
TMEM55B-202ENST00000398020 ADRA2BP18089 450 aa32.88■■■□□ 2.85
TMEM55B-202ENST00000398020 TSPYL6Q8N831 410 aa32.87■■■□□ 2.85
TMEM55B-202ENST00000398020 MYH16Q9H6N6 1097 aa32.87■■■□□ 2.85
TMEM55B-202ENST00000398020 ATF5Q9Y2D1 282 aaPredicted RBP32.87■■■□□ 2.85
TMEM55B-202ENST00000398020 RFC4P35249 363 aa32.86■■■□□ 2.85
TMEM55B-202ENST00000398020 EIF5P55010 431 aaKnown RBP32.86■■■□□ 2.85
TMEM55B-202ENST00000398020 CDCA7LQ96GN5 454 aa32.86■■■□□ 2.85
TMEM55B-202ENST00000398020 IL6STP40189 918 aaPredicted RBP32.85■■■□□ 2.85
TMEM55B-202ENST00000398020 MSL1Q68DK7 614 aa32.85■■■□□ 2.85
TMEM55B-202ENST00000398020 SRP68Q9UHB9 627 aaKnown RBP32.85■■■□□ 2.85
TMEM55B-202ENST00000398020 MYL6BP14649 208 aa32.84■■■□□ 2.85
TMEM55B-202ENST00000398020 HDGFL1Q5TGJ6 251 aa32.84■■■□□ 2.85
TMEM55B-202ENST00000398020 MTFR1LQ9H019 292 aa32.84■■■□□ 2.85
TMEM55B-202ENST00000398020 HOXB7P09629 217 aa32.83■■■□□ 2.85
TMEM55B-202ENST00000398020 SLC16A10Q8TF71 515 aa32.83■■■□□ 2.85
TMEM55B-202ENST00000398020 ARXQ96QS3 562 aa32.83■■■□□ 2.85
TMEM55B-202ENST00000398020 EXOSC9Q06265 439 aaKnown RBP32.82■■■□□ 2.84
TMEM55B-202ENST00000398020 ANXA1P04083 346 aa32.82■■■□□ 2.84
TMEM55B-202ENST00000398020 E9PSI1 815 aa32.81■■■□□ 2.84
TMEM55B-202ENST00000398020 NPM2Q86SE8 214 aaKnown RBP32.81■■■□□ 2.84
TMEM55B-202ENST00000398020 TBC1D2BQ9UPU7 963 aa32.81■■■□□ 2.84
TMEM55B-202ENST00000398020 SLFN5Q08AF3 891 aa32.8■■■□□ 2.84
TMEM55B-202ENST00000398020 PDIA6Q15084 440 aa32.8■■■□□ 2.84
TMEM55B-202ENST00000398020 PROSER3Q2NL68 480 aa32.8■■■□□ 2.84
TMEM55B-202ENST00000398020 USP42Q9H9J4 1324 aaKnown RBP32.79■■■□□ 2.84
TMEM55B-202ENST00000398020 TWISTNBQ3B726 338 aaPredicted RBP32.79■■■□□ 2.84
TMEM55B-202ENST00000398020 SPON1Q9HCB6 807 aa32.79■■■□□ 2.84
TMEM55B-202ENST00000398020 CHPF2Q9P2E5 772 aa32.78■■■□□ 2.84
TMEM55B-202ENST00000398020 ZPR1O75312 459 aa32.78■■■□□ 2.84
TMEM55B-202ENST00000398020 USPL1Q5W0Q7 1092 aa32.78■■■□□ 2.84
TMEM55B-202ENST00000398020 ERBB4Q15303 1308 aa32.77■■■□□ 2.84
TMEM55B-202ENST00000398020 GYS1P13807 737 aa32.77■■■□□ 2.84
TMEM55B-202ENST00000398020 A0A087WZG4 1122 aa32.76■■■□□ 2.84
TMEM55B-202ENST00000398020 NARFQ9UHQ1 456 aa32.76■■■□□ 2.84
TMEM55B-202ENST00000398020 DZIP3Q86Y13 1208 aaKnown RBP32.75■■■□□ 2.83
TMEM55B-202ENST00000398020 TCERG1O14776 1098 aaKnown RBP32.74■■■□□ 2.83
TMEM55B-202ENST00000398020 PTGER2P43116 358 aa32.73■■■□□ 2.83
TMEM55B-202ENST00000398020 LRP10Q7Z4F1 713 aa32.73■■■□□ 2.83
TMEM55B-202ENST00000398020 DDX21Q9NR30 783 aaKnown RBP eCLIP32.73■■■□□ 2.83
TMEM55B-202ENST00000398020 FKBP8Q14318 412 aa32.72■■■□□ 2.83
TMEM55B-202ENST00000398020 DBF4Q9UBU7 674 aaPredicted RBP32.72■■■□□ 2.83
TMEM55B-202ENST00000398020 ZBED9Q6R2W3 1325 aa32.71■■■□□ 2.83
TMEM55B-202ENST00000398020 VAMP4O75379 141 aa32.71■■■□□ 2.83
TMEM55B-202ENST00000398020 TTLL7Q6ZT98 887 aa32.71■■■□□ 2.83
TMEM55B-202ENST00000398020 SGIP1Q9BQI5 828 aa32.71■■■□□ 2.83
TMEM55B-202ENST00000398020 BCL2L12Q9HB09 334 aa32.71■■■□□ 2.83
TMEM55B-202ENST00000398020 CAMTA2O94983 1202 aa32.7■■■□□ 2.83
TMEM55B-202ENST00000398020 CCDC30Q5VVM6 783 aa32.7■■■□□ 2.83
TMEM55B-202ENST00000398020 TRMT2AQ8IZ69 625 aaKnown RBP32.7■■■□□ 2.83
TMEM55B-202ENST00000398020 COL24A1Q17RW2 1714 aa32.7■■■□□ 2.83
TMEM55B-202ENST00000398020 SCN7AQ01118 1682 aa32.7■■■□□ 2.82
TMEM55B-202ENST00000398020 NLGN1Q8N2Q7 840 aa32.69■■■□□ 2.82
TMEM55B-202ENST00000398020 AIMP1Q12904 312 aaKnown RBP32.69■■■□□ 2.82
TMEM55B-202ENST00000398020 LRP5O75197 1615 aa32.68■■■□□ 2.82
TMEM55B-202ENST00000398020 POLD1P28340 1107 aa32.67■■■□□ 2.82
TMEM55B-202ENST00000398020 XAGE3Q8WTP9 111 aa32.67■■■□□ 2.82
TMEM55B-202ENST00000398020 BCORQ6W2J9 1755 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms