RNA–Protein interactions for RNA: ENST00000397317.8

CLDN7-202, Transcript of claudin 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN7, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-202ENST00000397317 COL23A1Q86Y22 540 aaPredicted RBP23.27■■□□□ 1.32
CLDN7-202ENST00000397317 CFAP44Q96MT7 982 aa23.27■■□□□ 1.32
CLDN7-202ENST00000397317 PHF14O94880 888 aa23.26■■□□□ 1.31
CLDN7-202ENST00000397317 WWC1Q8IX03 1113 aa23.26■■□□□ 1.31
CLDN7-202ENST00000397317 MTFR1LQ9H019 292 aa23.26■■□□□ 1.31
CLDN7-202ENST00000397317 SPON1Q9HCB6 807 aa23.26■■□□□ 1.31
CLDN7-202ENST00000397317 LAS1LQ9Y4W2 734 aaKnown RBP23.26■■□□□ 1.31
CLDN7-202ENST00000397317 GNAI1P63096 354 aa23.25■■□□□ 1.31
CLDN7-202ENST00000397317 TRAPPC3LQ5T215 181 aa23.25■■□□□ 1.31
CLDN7-202ENST00000397317 AMIGO3Q86WK7 504 aa23.25■■□□□ 1.31
CLDN7-202ENST00000397317 IFT57Q9NWB7 429 aa23.25■■□□□ 1.31
CLDN7-202ENST00000397317 MYH14Q7Z406 1995 aaKnown RBP23.25■■□□□ 1.31
CLDN7-202ENST00000397317 ZBTB7AO95365 584 aa23.24■■□□□ 1.31
CLDN7-202ENST00000397317 SENP3-EIF4A1A0A087X0R7 540 aa23.23■■□□□ 1.31
CLDN7-202ENST00000397317 GIGYF1O75420 1035 aaPredicted RBP23.23■■□□□ 1.31
CLDN7-202ENST00000397317 ZNF853P0CG23 659 aa23.23■■□□□ 1.31
CLDN7-202ENST00000397317 ZBTB1Q9Y2K1 713 aa23.22■■□□□ 1.31
CLDN7-202ENST00000397317 USP16Q9Y5T5 823 aa23.22■■□□□ 1.31
CLDN7-202ENST00000397317 SMIM5Q71RC9 77 aa23.21■■□□□ 1.31
CLDN7-202ENST00000397317 SOS1Q07889 1333 aaPredicted RBP23.21■■□□□ 1.31
CLDN7-202ENST00000397317 IL16Q14005 1332 aa23.21■■□□□ 1.31
CLDN7-202ENST00000397317 PRAMEF22A3QJZ6 481 aa23.2■■□□□ 1.3
CLDN7-202ENST00000397317 CANXP27824 592 aaKnown RBP23.2■■□□□ 1.3
CLDN7-202ENST00000397317 RFC4P35249 363 aa23.2■■□□□ 1.3
CLDN7-202ENST00000397317 WDR63Q8IWG1 891 aa23.2■■□□□ 1.3
CLDN7-202ENST00000397317 ARHGEF1Q92888 912 aaKnown RBP23.2■■□□□ 1.3
CLDN7-202ENST00000397317 MBIPQ9NS73 344 aa23.2■■□□□ 1.3
CLDN7-202ENST00000397317 SALL2Q9Y467 1007 aaPredicted RBP23.2■■□□□ 1.3
CLDN7-202ENST00000397317 ATF5Q9Y2D1 282 aaPredicted RBP23.19■■□□□ 1.3
CLDN7-202ENST00000397317 LAMB4A4D0S4 1761 aa23.19■■□□□ 1.3
CLDN7-202ENST00000397317 A1BGP04217 495 aa23.18■■□□□ 1.3
CLDN7-202ENST00000397317 IL6STP40189 918 aaPredicted RBP23.18■■□□□ 1.3
CLDN7-202ENST00000397317 COL15A1P39059 1388 aa23.17■■□□□ 1.3
CLDN7-202ENST00000397317 EIF5P55010 431 aaKnown RBP23.17■■□□□ 1.3
CLDN7-202ENST00000397317 NPM2Q86SE8 214 aaKnown RBP23.17■■□□□ 1.3
CLDN7-202ENST00000397317 A0A087WZG4 1122 aa23.16■■□□□ 1.3
CLDN7-202ENST00000397317 HOXB7P09629 217 aa23.15■■□□□ 1.3
CLDN7-202ENST00000397317 POLD1P28340 1107 aa23.15■■□□□ 1.3
CLDN7-202ENST00000397317 PTGER2P43116 358 aa23.15■■□□□ 1.3
CLDN7-202ENST00000397317 ERBB4Q15303 1308 aa23.14■■□□□ 1.3
CLDN7-202ENST00000397317 USP42Q9H9J4 1324 aaKnown RBP23.14■■□□□ 1.3
CLDN7-202ENST00000397317 C4AP0C0L4 1744 aa23.14■■□□□ 1.3
CLDN7-202ENST00000397317 SGIP1Q9BQI5 828 aa23.14■■□□□ 1.29
CLDN7-202ENST00000397317 COL24A1Q17RW2 1714 aa23.13■■□□□ 1.29
CLDN7-202ENST00000397317 ZPR1O75312 459 aa23.13■■□□□ 1.29
CLDN7-202ENST00000397317 NLGN1Q8N2Q7 840 aa23.13■■□□□ 1.29
CLDN7-202ENST00000397317 MSL1Q68DK7 614 aa23.12■■□□□ 1.29
CLDN7-202ENST00000397317 PPP1R1BQ9UD71 204 aaPredicted RBP23.12■■□□□ 1.29
CLDN7-202ENST00000397317 NARFQ9UHQ1 456 aa23.12■■□□□ 1.29
CLDN7-202ENST00000397317 ZNF330Q9Y3S2 320 aaPredicted RBP23.12■■□□□ 1.29
CLDN7-202ENST00000397317 NBPF26B4DH59 902 aa23.11■■□□□ 1.29
CLDN7-202ENST00000397317 GYS1P13807 737 aa23.11■■□□□ 1.29
CLDN7-202ENST00000397317 KRT24Q2M2I5 525 aa23.11■■□□□ 1.29
CLDN7-202ENST00000397317 NBPF10Q6P3W6 841 aaKnown RBP23.11■■□□□ 1.29
CLDN7-202ENST00000397317 NBPF15Q8N660 670 aa23.11■■□□□ 1.29
CLDN7-202ENST00000397317 ZNF521Q96K83 1311 aa23.1■■□□□ 1.29
CLDN7-202ENST00000397317 EIF2S2P20042 333 aaKnown RBP23.1■■□□□ 1.29
CLDN7-202ENST00000397317 DUSP27Q5VZP5 1158 aa23.1■■□□□ 1.29
CLDN7-202ENST00000397317 SRP68Q9UHB9 627 aaKnown RBP23.1■■□□□ 1.29
CLDN7-202ENST00000397317 PIP4K2AP48426 406 aaPredicted RBP23.09■■□□□ 1.29
CLDN7-202ENST00000397317 TSR2Q969E8 191 aaKnown RBP23.09■■□□□ 1.29
CLDN7-202ENST00000397317 ARXQ96QS3 562 aa23.09■■□□□ 1.29
CLDN7-202ENST00000397317 CHMP4AQ9BY43 222 aa23.09■■□□□ 1.29
CLDN7-202ENST00000397317 MYH16Q9H6N6 1097 aa23.09■■□□□ 1.29
CLDN7-202ENST00000397317 USPL1Q5W0Q7 1092 aa23.08■■□□□ 1.29
CLDN7-202ENST00000397317 FANCIQ9NVI1 1328 aa23.08■■□□□ 1.28
CLDN7-202ENST00000397317 GOLGA2Q08379 1002 aa23.07■■□□□ 1.28
CLDN7-202ENST00000397317 HDGFL1Q5TGJ6 251 aa23.07■■□□□ 1.28
CLDN7-202ENST00000397317 DZIP3Q86Y13 1208 aaKnown RBP23.07■■□□□ 1.28
CLDN7-202ENST00000397317 C8orf58Q8NAV2 365 aa23.06■■□□□ 1.28
CLDN7-202ENST00000397317 TBC1D2BQ9UPU7 963 aa23.06■■□□□ 1.28
CLDN7-202ENST00000397317 MYL6BP14649 208 aa23.05■■□□□ 1.28
CLDN7-202ENST00000397317 FKBP8Q14318 412 aa23.05■■□□□ 1.28
CLDN7-202ENST00000397317 ELL2O00472 640 aaPredicted RBP23.04■■□□□ 1.28
CLDN7-202ENST00000397317 RGL2O15211 777 aa23.04■■□□□ 1.28
CLDN7-202ENST00000397317 MMP10P09238 476 aa23.04■■□□□ 1.28
CLDN7-202ENST00000397317 PDIA6Q15084 440 aa23.04■■□□□ 1.28
CLDN7-202ENST00000397317 NECTIN2Q92692 538 aa23.04■■□□□ 1.28
CLDN7-202ENST00000397317 DDX21Q9NR30 783 aaKnown RBP eCLIP23.04■■□□□ 1.28
CLDN7-202ENST00000397317 SCN7AQ01118 1682 aa23.03■■□□□ 1.28
CLDN7-202ENST00000397317 CAMTA2O94983 1202 aa23.03■■□□□ 1.28
CLDN7-202ENST00000397317 BCL2L12Q9HB09 334 aa23.03■■□□□ 1.28
CLDN7-202ENST00000397317 SPINK5Q9NQ38 1064 aaPredicted RBP23.03■■□□□ 1.28
CLDN7-202ENST00000397317 DBF4Q9UBU7 674 aaPredicted RBP23.03■■□□□ 1.28
CLDN7-202ENST00000397317 E9PSI1 815 aa23.02■■□□□ 1.28
CLDN7-202ENST00000397317 ZNF652Q9Y2D9 606 aa23.02■■□□□ 1.28
CLDN7-202ENST00000397317 TWISTNBQ3B726 338 aaPredicted RBP23.01■■□□□ 1.27
CLDN7-202ENST00000397317 CLEC4GQ6UXB4 293 aa23.01■■□□□ 1.27
CLDN7-202ENST00000397317 KIF6Q6ZMV9 814 aa23.01■■□□□ 1.27
CLDN7-202ENST00000397317 CHPF2Q9P2E5 772 aa23.01■■□□□ 1.27
CLDN7-202ENST00000397317 PARP3Q9Y6F1 533 aa23.01■■□□□ 1.27
CLDN7-202ENST00000397317 PROSER3Q2NL68 480 aa23■■□□□ 1.27
CLDN7-202ENST00000397317 CCDC30Q5VVM6 783 aa23■■□□□ 1.27
CLDN7-202ENST00000397317 LRP10Q7Z4F1 713 aa23■■□□□ 1.27
CLDN7-202ENST00000397317 TSPYL6Q8N831 410 aa23■■□□□ 1.27
CLDN7-202ENST00000397317 BCORQ6W2J9 1755 aa22.99■■□□□ 1.27
CLDN7-202ENST00000397317 ERVV-1B6SEH8 477 aa22.99■■□□□ 1.27
CLDN7-202ENST00000397317 TM4SF1P30408 202 aa22.99■■□□□ 1.27
CLDN7-202ENST00000397317 HYPKQ9NX55 129 aa22.99■■□□□ 1.27
CLDN7-202ENST00000397317 ANXA1P04083 346 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms