RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 CWF19L2Q2TBE0 894 aaKnown RBP20.09■□□□□ 0.81
SIPA1-201ENST00000394224 MPRIPQ6WCQ1 1025 aa20.09■□□□□ 0.81
SIPA1-201ENST00000394224 RUFY3Q7L099 469 aa20.09■□□□□ 0.81
SIPA1-201ENST00000394224 RHPN1Q8TCX5 695 aa20.09■□□□□ 0.81
SIPA1-201ENST00000394224 BOLA2Q9H3K6 86 aa20.09■□□□□ 0.81
SIPA1-201ENST00000394224 CHPF2Q9P2E5 772 aa20.09■□□□□ 0.81
SIPA1-201ENST00000394224 MED14O60244 1454 aa20.09■□□□□ 0.81
SIPA1-201ENST00000394224 HAP1P54257 671 aaPredicted RBP20.09■□□□□ 0.81
SIPA1-201ENST00000394224 LRMPQ12912 555 aa20.09■□□□□ 0.81
SIPA1-201ENST00000394224 NAA30Q147X3 362 aaPredicted RBP20.09■□□□□ 0.81
SIPA1-201ENST00000394224 PYCARDQ9ULZ3 195 aa20.09■□□□□ 0.81
SIPA1-201ENST00000394224 ADGRB2O60241 1585 aa20.09■□□□□ 0.81
SIPA1-201ENST00000394224 PTPRCP08575 1304 aa20.09■□□□□ 0.81
SIPA1-201ENST00000394224 CSPP1Q1MSJ5 1256 aa20.09■□□□□ 0.81
SIPA1-201ENST00000394224 PTPRMP28827 1452 aa20.08■□□□□ 0.81
SIPA1-201ENST00000394224 LGR6Q9HBX8 967 aa20.08■□□□□ 0.81
SIPA1-201ENST00000394224 ZNF500O60304 480 aaPredicted RBP20.08■□□□□ 0.81
SIPA1-201ENST00000394224 ATP8B2P98198 1209 aa20.08■□□□□ 0.81
SIPA1-201ENST00000394224 INO80Q9ULG1 1556 aaPredicted RBP20.07■□□□□ 0.8
SIPA1-201ENST00000394224 PRAMEF22A3QJZ6 481 aa20.07■□□□□ 0.8
SIPA1-201ENST00000394224 ABTB2Q8N961 1025 aa20.07■□□□□ 0.8
SIPA1-201ENST00000394224 FAM227BQ96M60 508 aa20.07■□□□□ 0.8
SIPA1-201ENST00000394224 PHF14O94880 888 aa20.07■□□□□ 0.8
SIPA1-201ENST00000394224 MAPK8IP2Q13387 824 aaPredicted RBP20.07■□□□□ 0.8
SIPA1-201ENST00000394224 ZSCAN22P10073 491 aaPredicted RBP20.07■□□□□ 0.8
SIPA1-201ENST00000394224 PTGS1P23219 599 aa20.07■□□□□ 0.8
SIPA1-201ENST00000394224 LARP1BQ659C4 914 aaKnown RBP20.07■□□□□ 0.8
SIPA1-201ENST00000394224 PDRG1Q9NUG6 133 aa20.07■□□□□ 0.8
SIPA1-201ENST00000394224 NRBP1Q9UHY1 535 aa20.07■□□□□ 0.8
SIPA1-201ENST00000394224 AP5Z1O43299 807 aa20.06■□□□□ 0.8
SIPA1-201ENST00000394224 CLEC17AQ6ZS10 378 aa20.06■□□□□ 0.8
SIPA1-201ENST00000394224 IFIT2P09913 472 aaKnown RBP20.06■□□□□ 0.8
SIPA1-201ENST00000394224 IL17REQ8NFR9 667 aa20.06■□□□□ 0.8
SIPA1-201ENST00000394224 AACSQ86V21 672 aa20.06■□□□□ 0.8
SIPA1-201ENST00000394224 TAF6LQ9Y6J9 622 aa20.06■□□□□ 0.8
SIPA1-201ENST00000394224 VWDEQ8N2E2 1590 aa20.05■□□□□ 0.8
SIPA1-201ENST00000394224 BICD2Q8TD16 824 aa20.05■□□□□ 0.8
SIPA1-201ENST00000394224 HSP90B1P14625 803 aaKnown RBP20.05■□□□□ 0.8
SIPA1-201ENST00000394224 CCDC183Q5T5S1 534 aa20.05■□□□□ 0.8
SIPA1-201ENST00000394224 GUCY1B3Q02153 619 aa20.04■□□□□ 0.8
SIPA1-201ENST00000394224 LRRC59Q96AG4 307 aaKnown RBP20.04■□□□□ 0.8
SIPA1-201ENST00000394224 ZFYVE9O95405 1425 aa20.04■□□□□ 0.8
SIPA1-201ENST00000394224 PIK3R4Q99570 1358 aa20.04■□□□□ 0.8
SIPA1-201ENST00000394224 TRIM5Q9C035 493 aa20.04■□□□□ 0.8
SIPA1-201ENST00000394224 U2AF2P26368 475 aaKnown RBP eCLIP20.04■□□□□ 0.8
SIPA1-201ENST00000394224 NCBP3Q53F19 620 aaKnown RBP20.04■□□□□ 0.8
SIPA1-201ENST00000394224 CNTROBQ8N137 903 aa20.04■□□□□ 0.8
SIPA1-201ENST00000394224 LIMCH1Q9UPQ0 1083 aa20.04■□□□□ 0.8
SIPA1-201ENST00000394224 CPS1P31327 1500 aa20.04■□□□□ 0.8
SIPA1-201ENST00000394224 GNAT3A8MTJ3 354 aa20.03■□□□□ 0.8
SIPA1-201ENST00000394224 MYL6BP14649 208 aa20.03■□□□□ 0.8
SIPA1-201ENST00000394224 DEPDC5O75140 1603 aa20.03■□□□□ 0.8
SIPA1-201ENST00000394224 LIG1P18858 919 aa20.03■□□□□ 0.8
SIPA1-201ENST00000394224 KIAA1210Q9ULL0 1709 aa20.03■□□□□ 0.8
SIPA1-201ENST00000394224 RAB11FIP3O75154 756 aa20.02■□□□□ 0.8
SIPA1-201ENST00000394224 F13A1P00488 732 aa20.02■□□□□ 0.8
SIPA1-201ENST00000394224 NEXMIFQ5QGS0 1516 aa20.02■□□□□ 0.8
SIPA1-201ENST00000394224 MCM2P49736 904 aa20.02■□□□□ 0.8
SIPA1-201ENST00000394224 CDC37L1Q7L3B6 337 aa20.02■□□□□ 0.8
SIPA1-201ENST00000394224 SETBP1Q9Y6X0 1596 aa20.02■□□□□ 0.8
SIPA1-201ENST00000394224 ZC3H13Q5T200 1668 aaKnown RBP20.02■□□□□ 0.8
SIPA1-201ENST00000394224 MAP2P11137 1827 aaKnown RBP20.02■□□□□ 0.79
SIPA1-201ENST00000394224 SLFNL1Q499Z3 407 aa20.02■□□□□ 0.79
SIPA1-201ENST00000394224 ARHGEF40Q8TER5 1519 aa20.01■□□□□ 0.79
SIPA1-201ENST00000394224 RAB11FIP4Q86YS3 637 aa20.01■□□□□ 0.79
SIPA1-201ENST00000394224 FMNL2Q96PY5 1086 aa20.01■□□□□ 0.79
SIPA1-201ENST00000394224 RGS12O14924 1447 aa20.01■□□□□ 0.79
SIPA1-201ENST00000394224 CCDC186Q7Z3E2 898 aa20.01■□□□□ 0.79
SIPA1-201ENST00000394224 STK11IPQ8N1F8 1099 aa20.01■□□□□ 0.79
SIPA1-201ENST00000394224 TRMT1Q9NXH9 659 aaKnown RBP20.01■□□□□ 0.79
SIPA1-201ENST00000394224 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.01■□□□□ 0.79
SIPA1-201ENST00000394224 TEFQ10587 303 aa20.01■□□□□ 0.79
SIPA1-201ENST00000394224 CHAF1AQ13111 956 aaPredicted RBP20.01■□□□□ 0.79
SIPA1-201ENST00000394224 CLASRPQ8N2M8 674 aaKnown RBP20.01■□□□□ 0.79
SIPA1-201ENST00000394224 DACT1Q9NYF0 836 aa20.01■□□□□ 0.79
SIPA1-201ENST00000394224 KIF3AQ9Y496 699 aa20.01■□□□□ 0.79
SIPA1-201ENST00000394224 ME3Q16798 604 aa20■□□□□ 0.79
SIPA1-201ENST00000394224 MYO3AQ8NEV4 1616 aa20■□□□□ 0.79
SIPA1-201ENST00000394224 FILIP1Q7Z7B0 1213 aa20■□□□□ 0.79
SIPA1-201ENST00000394224 FSD1Q9BTV5 496 aa20■□□□□ 0.79
SIPA1-201ENST00000394224 DYNC1I1O14576 645 aa20■□□□□ 0.79
SIPA1-201ENST00000394224 HSPA4P34932 840 aa20■□□□□ 0.79
SIPA1-201ENST00000394224 CUL4AQ13619 759 aa20■□□□□ 0.79
SIPA1-201ENST00000394224 ZSCAN21Q9Y5A6 473 aaPredicted RBP20■□□□□ 0.79
SIPA1-201ENST00000394224 ARHGEF28Q8N1W1 1705 aaKnown RBP19.99■□□□□ 0.79
SIPA1-201ENST00000394224 RIOK3O14730 519 aaKnown RBP19.99■□□□□ 0.79
SIPA1-201ENST00000394224 SGSM2O43147 1006 aa19.99■□□□□ 0.79
SIPA1-201ENST00000394224 DNAJC2Q99543 621 aaKnown RBP19.99■□□□□ 0.79
SIPA1-201ENST00000394224 TLR7Q9NYK1 1049 aaKnown RBP19.99■□□□□ 0.79
SIPA1-201ENST00000394224 CYP46A1Q9Y6A2 500 aa19.99■□□□□ 0.79
SIPA1-201ENST00000394224 ATP2B3Q16720 1220 aa19.99■□□□□ 0.79
SIPA1-201ENST00000394224 PROSER3Q2NL68 480 aa19.99■□□□□ 0.79
SIPA1-201ENST00000394224 FTOQ9C0B1 505 aaKnown RBP eCLIP19.99■□□□□ 0.79
SIPA1-201ENST00000394224 UHRF1BP1LA0JNW5 1464 aa19.99■□□□□ 0.79
SIPA1-201ENST00000394224 PPLO60437 1756 aa19.99■□□□□ 0.79
SIPA1-201ENST00000394224 CHST3Q7LGC8 479 aa19.99■□□□□ 0.79
SIPA1-201ENST00000394224 IBTKQ9P2D0 1353 aaPredicted RBP19.98■□□□□ 0.79
SIPA1-201ENST00000394224 SETD1BQ9UPS6 1966 aaKnown RBP19.98■□□□□ 0.79
SIPA1-201ENST00000394224 UBE2HP62256 183 aa19.98■□□□□ 0.79
SIPA1-201ENST00000394224 CCDC129Q6ZRS4 1044 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms