RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CALD1Q05682 793 aaKnown RBP24.84■■□□□ 1.57
PDLIM7-204ENST00000393546 LAS1LQ9Y4W2 734 aaKnown RBP24.84■■□□□ 1.57
PDLIM7-204ENST00000393546 EIF4A1P60842 406 aaKnown RBP24.83■■□□□ 1.57
PDLIM7-204ENST00000393546 LRP5O75197 1615 aa24.83■■□□□ 1.56
PDLIM7-204ENST00000393546 ARHGEF1Q92888 912 aaKnown RBP24.82■■□□□ 1.56
PDLIM7-204ENST00000393546 CHL1O00533 1208 aa24.81■■□□□ 1.56
PDLIM7-204ENST00000393546 RFC4P35249 363 aa24.81■■□□□ 1.56
PDLIM7-204ENST00000393546 NCBP3Q53F19 620 aaKnown RBP24.81■■□□□ 1.56
PDLIM7-204ENST00000393546 PPP1R1BQ9UD71 204 aaPredicted RBP24.81■■□□□ 1.56
PDLIM7-204ENST00000393546 USP16Q9Y5T5 823 aa24.81■■□□□ 1.56
PDLIM7-204ENST00000393546 KDM3BQ7LBC6 1761 aa24.8■■□□□ 1.56
PDLIM7-204ENST00000393546 SENP3-EIF4A1A0A087X0R7 540 aa24.8■■□□□ 1.56
PDLIM7-204ENST00000393546 CANXP27824 592 aaKnown RBP24.8■■□□□ 1.56
PDLIM7-204ENST00000393546 PTGER2P43116 358 aa24.8■■□□□ 1.56
PDLIM7-204ENST00000393546 CCDC27Q2M243 656 aa24.8■■□□□ 1.56
PDLIM7-204ENST00000393546 ZBTB1Q9Y2K1 713 aa24.8■■□□□ 1.56
PDLIM7-204ENST00000393546 PRAMEF22A3QJZ6 481 aa24.79■■□□□ 1.56
PDLIM7-204ENST00000393546 POLD1P28340 1107 aa24.79■■□□□ 1.56
PDLIM7-204ENST00000393546 CFAP44Q96MT7 982 aa24.79■■□□□ 1.56
PDLIM7-204ENST00000393546 GIGYF1O75420 1035 aaPredicted RBP24.78■■□□□ 1.56
PDLIM7-204ENST00000393546 MIER1Q8N108 512 aa24.78■■□□□ 1.56
PDLIM7-204ENST00000393546 SOS1Q07889 1333 aaPredicted RBP24.78■■□□□ 1.56
PDLIM7-204ENST00000393546 A1BGP04217 495 aa24.77■■□□□ 1.56
PDLIM7-204ENST00000393546 MSL1Q68DK7 614 aa24.77■■□□□ 1.56
PDLIM7-204ENST00000393546 SGIP1Q9BQI5 828 aa24.77■■□□□ 1.56
PDLIM7-204ENST00000393546 GNAI1P63096 354 aa24.76■■□□□ 1.55
PDLIM7-204ENST00000393546 WWC1Q8IX03 1113 aa24.76■■□□□ 1.55
PDLIM7-204ENST00000393546 IFT57Q9NWB7 429 aa24.76■■□□□ 1.55
PDLIM7-204ENST00000393546 NPM2Q86SE8 214 aaKnown RBP24.75■■□□□ 1.55
PDLIM7-204ENST00000393546 NGEFQ8N5V2 710 aa24.75■■□□□ 1.55
PDLIM7-204ENST00000393546 SALL2Q9Y467 1007 aaPredicted RBP24.75■■□□□ 1.55
PDLIM7-204ENST00000393546 A0A087WZG4 1122 aa24.74■■□□□ 1.55
PDLIM7-204ENST00000393546 ZNF853P0CG23 659 aa24.74■■□□□ 1.55
PDLIM7-204ENST00000393546 IL6STP40189 918 aaPredicted RBP24.74■■□□□ 1.55
PDLIM7-204ENST00000393546 EIF5P55010 431 aaKnown RBP24.74■■□□□ 1.55
PDLIM7-204ENST00000393546 ZPR1O75312 459 aa24.73■■□□□ 1.55
PDLIM7-204ENST00000393546 NLGN1Q8N2Q7 840 aa24.73■■□□□ 1.55
PDLIM7-204ENST00000393546 ARXQ96QS3 562 aa24.73■■□□□ 1.55
PDLIM7-204ENST00000393546 SRCAPQ6ZRS2 3230 aa24.73■■□□□ 1.55
PDLIM7-204ENST00000393546 COL15A1P39059 1388 aa24.72■■□□□ 1.55
PDLIM7-204ENST00000393546 MBIPQ9NS73 344 aa24.72■■□□□ 1.55
PDLIM7-204ENST00000393546 ZNF330Q9Y3S2 320 aaPredicted RBP24.72■■□□□ 1.55
PDLIM7-204ENST00000393546 GYS1P13807 737 aa24.71■■□□□ 1.55
PDLIM7-204ENST00000393546 SRP68Q9UHB9 627 aaKnown RBP24.71■■□□□ 1.55
PDLIM7-204ENST00000393546 COL24A1Q17RW2 1714 aa24.7■■□□□ 1.54
PDLIM7-204ENST00000393546 USP42Q9H9J4 1324 aaKnown RBP24.7■■□□□ 1.54
PDLIM7-204ENST00000393546 NARFQ9UHQ1 456 aa24.7■■□□□ 1.54
PDLIM7-204ENST00000393546 PIP4K2AP48426 406 aaPredicted RBP24.69■■□□□ 1.54
PDLIM7-204ENST00000393546 WDR63Q8IWG1 891 aa24.69■■□□□ 1.54
PDLIM7-204ENST00000393546 IL16Q14005 1332 aa24.68■■□□□ 1.54
PDLIM7-204ENST00000393546 EIF2S2P20042 333 aaKnown RBP24.68■■□□□ 1.54
PDLIM7-204ENST00000393546 USPL1Q5W0Q7 1092 aa24.68■■□□□ 1.54
PDLIM7-204ENST00000393546 C4AP0C0L4 1744 aa24.67■■□□□ 1.54
PDLIM7-204ENST00000393546 NBPF26B4DH59 902 aa24.67■■□□□ 1.54
PDLIM7-204ENST00000393546 NBPF10Q6P3W6 841 aaKnown RBP24.67■■□□□ 1.54
PDLIM7-204ENST00000393546 NBPF15Q8N660 670 aa24.67■■□□□ 1.54
PDLIM7-204ENST00000393546 KRT24Q2M2I5 525 aa24.66■■□□□ 1.54
PDLIM7-204ENST00000393546 TBC1D2BQ9UPU7 963 aa24.66■■□□□ 1.54
PDLIM7-204ENST00000393546 LAMB4A4D0S4 1761 aa24.66■■□□□ 1.54
PDLIM7-204ENST00000393546 MMP10P09238 476 aa24.65■■□□□ 1.54
PDLIM7-204ENST00000393546 ERBB4Q15303 1308 aa24.64■■□□□ 1.54
PDLIM7-204ENST00000393546 HOXB7P09629 217 aa24.64■■□□□ 1.54
PDLIM7-204ENST00000393546 FKBP8Q14318 412 aa24.64■■□□□ 1.54
PDLIM7-204ENST00000393546 DZIP3Q86Y13 1208 aaKnown RBP24.64■■□□□ 1.54
PDLIM7-204ENST00000393546 DUSP27Q5VZP5 1158 aa24.63■■□□□ 1.53
PDLIM7-204ENST00000393546 FHDC1Q9C0D6 1143 aaPredicted RBP24.63■■□□□ 1.53
PDLIM7-204ENST00000393546 MYL6BP14649 208 aa24.62■■□□□ 1.53
PDLIM7-204ENST00000393546 KLHL34Q8N239 644 aa24.62■■□□□ 1.53
PDLIM7-204ENST00000393546 PARP3Q9Y6F1 533 aa24.62■■□□□ 1.53
PDLIM7-204ENST00000393546 NECTIN2Q92692 538 aa24.61■■□□□ 1.53
PDLIM7-204ENST00000393546 TSR2Q969E8 191 aaKnown RBP24.61■■□□□ 1.53
PDLIM7-204ENST00000393546 BCL2L12Q9HB09 334 aa24.61■■□□□ 1.53
PDLIM7-204ENST00000393546 TM4SF1P30408 202 aa24.6■■□□□ 1.53
PDLIM7-204ENST00000393546 HDGFL1Q5TGJ6 251 aa24.6■■□□□ 1.53
PDLIM7-204ENST00000393546 SYT17Q9BSW7 474 aa24.6■■□□□ 1.53
PDLIM7-204ENST00000393546 ELL2O00472 640 aaPredicted RBP24.59■■□□□ 1.53
PDLIM7-204ENST00000393546 CAMTA2O94983 1202 aa24.59■■□□□ 1.53
PDLIM7-204ENST00000393546 CHMP4AQ9BY43 222 aa24.59■■□□□ 1.53
PDLIM7-204ENST00000393546 PDIA6Q15084 440 aa24.58■■□□□ 1.53
PDLIM7-204ENST00000393546 C8orf58Q8NAV2 365 aa24.58■■□□□ 1.53
PDLIM7-204ENST00000393546 NFIXQ14938 502 aa24.57■■□□□ 1.52
PDLIM7-204ENST00000393546 DDX21Q9NR30 783 aaKnown RBP eCLIP24.57■■□□□ 1.52
PDLIM7-204ENST00000393546 ZNF652Q9Y2D9 606 aa24.57■■□□□ 1.52
PDLIM7-204ENST00000393546 CD2APQ9Y5K6 639 aa24.57■■□□□ 1.52
PDLIM7-204ENST00000393546 GOLGA2Q08379 1002 aa24.56■■□□□ 1.52
PDLIM7-204ENST00000393546 CLEC4GQ6UXB4 293 aa24.56■■□□□ 1.52
PDLIM7-204ENST00000393546 MYH16Q9H6N6 1097 aa24.56■■□□□ 1.52
PDLIM7-204ENST00000393546 KIF6Q6ZMV9 814 aa24.55■■□□□ 1.52
PDLIM7-204ENST00000393546 BICDL1Q6ZP65 573 aa24.55■■□□□ 1.52
PDLIM7-204ENST00000393546 DBF4Q9UBU7 674 aaPredicted RBP24.55■■□□□ 1.52
PDLIM7-204ENST00000393546 ZNF521Q96K83 1311 aa24.55■■□□□ 1.52
PDLIM7-204ENST00000393546 POLRMTO00411 1230 aaKnown RBP24.54■■□□□ 1.52
PDLIM7-204ENST00000393546 RGL2O15211 777 aa24.54■■□□□ 1.52
PDLIM7-204ENST00000393546 ANXA1P04083 346 aa24.54■■□□□ 1.52
PDLIM7-204ENST00000393546 DDR1Q08345 913 aa24.54■■□□□ 1.52
PDLIM7-204ENST00000393546 PROSER3Q2NL68 480 aa24.54■■□□□ 1.52
PDLIM7-204ENST00000393546 TBC1D9BQ66K14 1250 aa24.54■■□□□ 1.52
PDLIM7-204ENST00000393546 TTLL7Q6ZT98 887 aa24.54■■□□□ 1.52
PDLIM7-204ENST00000393546 CHPF2Q9P2E5 772 aa24.54■■□□□ 1.52
PDLIM7-204ENST00000393546 FANCIQ9NVI1 1328 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms