RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 NXF1Q9UBU9 619 aaKnown RBP5.91□□□□□ -1.46
RNU6-550P-201ENST00000391057 ZNF232Q9UNY5 417 aa5.91□□□□□ -1.46
RNU6-550P-201ENST00000391057 USTQ9Y2C2 406 aa5.91□□□□□ -1.46
RNU6-550P-201ENST00000391057 PARP3Q9Y6F1 533 aa5.91□□□□□ -1.46
RNU6-550P-201ENST00000391057 ATAD2Q6PL18 1390 aa5.91□□□□□ -1.46
RNU6-550P-201ENST00000391057 C21orf2O43822 256 aa5.9□□□□□ -1.46
RNU6-550P-201ENST00000391057 PRMT3O60678 531 aa5.9□□□□□ -1.46
RNU6-550P-201ENST00000391057 TATP17735 454 aaPredicted RBP5.9□□□□□ -1.46
RNU6-550P-201ENST00000391057 NOS2P35228 1153 aa5.9□□□□□ -1.46
RNU6-550P-201ENST00000391057 FAM69CQ0P6D2 419 aa5.9□□□□□ -1.46
RNU6-550P-201ENST00000391057 RETREG2Q8NC44 543 aa5.9□□□□□ -1.46
RNU6-550P-201ENST00000391057 ZDHHC1Q8WTX9 485 aa5.9□□□□□ -1.46
RNU6-550P-201ENST00000391057 CLP1Q92989 425 aaKnown RBP5.9□□□□□ -1.46
RNU6-550P-201ENST00000391057 L3MBTL2Q969R5 705 aa5.9□□□□□ -1.46
RNU6-550P-201ENST00000391057 AIDAQ96BJ3 306 aa5.9□□□□□ -1.46
RNU6-550P-201ENST00000391057 TMEM88BA6NKF7 163 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 FOXO3O43524 673 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 PPFIA3O75145 1194 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 F11P03951 625 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 ITGA6P23229 1130 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 MSX1P28360 303 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 WEE1P30291 646 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 VEGFBP49765 207 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 RIPOR1Q6ZS17 1223 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 NPAS3Q8IXF0 933 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 PGBD3Q8N328 593 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 STAG2Q8N3U4 1231 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 C1orf216Q8TAB5 229 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 VTI1AQ96AJ9 217 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 PRIMPOLQ96LW4 560 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 GPAMQ9HCL2 828 aa5.89□□□□□ -1.47
RNU6-550P-201ENST00000391057 EML1O00423 815 aa5.88□□□□□ -1.47
RNU6-550P-201ENST00000391057 TERTO14746 1132 aaKnown RBP5.88□□□□□ -1.47
RNU6-550P-201ENST00000391057 TXLNAP40222 546 aa5.88□□□□□ -1.47
RNU6-550P-201ENST00000391057 HIRAP54198 1017 aaPredicted RBP5.88□□□□□ -1.47
RNU6-550P-201ENST00000391057 PDE4CQ08493 712 aa5.88□□□□□ -1.47
RNU6-550P-201ENST00000391057 SH3PXD2AQ5TCZ1 1133 aa5.88□□□□□ -1.47
RNU6-550P-201ENST00000391057 C2orf49Q9BVC5 232 aaPredicted RBP5.88□□□□□ -1.47
RNU6-550P-201ENST00000391057 ZDHHC3Q9NYG2 299 aa5.88□□□□□ -1.47
RNU6-550P-201ENST00000391057 CDC14CA4D256 554 aa5.87□□□□□ -1.47
RNU6-550P-201ENST00000391057 H3BM21 787 aa5.87□□□□□ -1.47
RNU6-550P-201ENST00000391057 H7C1W4 665 aa5.87□□□□□ -1.47
RNU6-550P-201ENST00000391057 ATP4AP20648 1035 aa5.87□□□□□ -1.47
RNU6-550P-201ENST00000391057 ATP2B4P23634 1241 aa5.87□□□□□ -1.47
RNU6-550P-201ENST00000391057 OCLNQ16625 522 aa5.87□□□□□ -1.47
RNU6-550P-201ENST00000391057 POTEAQ6S8J7 498 aa5.87□□□□□ -1.47
RNU6-550P-201ENST00000391057 SLC16A10Q8TF71 515 aa5.87□□□□□ -1.47
RNU6-550P-201ENST00000391057 RUBCNLQ9H714 662 aa5.87□□□□□ -1.47
RNU6-550P-201ENST00000391057 CXXC1Q9P0U4 656 aaPredicted RBP5.87□□□□□ -1.47
RNU6-550P-201ENST00000391057 HCN4Q9Y3Q4 1203 aa5.87□□□□□ -1.47
RNU6-550P-201ENST00000391057 CARNS1A5YM72 827 aa5.86□□□□□ -1.47
RNU6-550P-201ENST00000391057 FKBP5Q13451 457 aaPredicted RBP5.86□□□□□ -1.47
RNU6-550P-201ENST00000391057 ARSJQ5FYB0 599 aaPredicted RBP5.86□□□□□ -1.47
RNU6-550P-201ENST00000391057 EFHC2Q5JST6 749 aa5.86□□□□□ -1.47
RNU6-550P-201ENST00000391057 C1orf53Q5VUE5 145 aa5.86□□□□□ -1.47
RNU6-550P-201ENST00000391057 BICDL1Q6ZP65 573 aa5.86□□□□□ -1.47
RNU6-550P-201ENST00000391057 TRIM22Q8IYM9 498 aa5.86□□□□□ -1.47
RNU6-550P-201ENST00000391057 RHPN1Q8TCX5 695 aa5.86□□□□□ -1.47
RNU6-550P-201ENST00000391057 GMCL1Q96IK5 515 aa5.86□□□□□ -1.47
RNU6-550P-201ENST00000391057 NGLY1Q96IV0 654 aa5.86□□□□□ -1.47
RNU6-550P-201ENST00000391057 PHACTR1Q9C0D0 580 aa5.86□□□□□ -1.47
RNU6-550P-201ENST00000391057 NUCKS1Q9H1E3 243 aaKnown RBP5.86□□□□□ -1.47
RNU6-550P-201ENST00000391057 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.86□□□□□ -1.47
RNU6-550P-201ENST00000391057 SLAIN2Q9P270 581 aa5.86□□□□□ -1.47
RNU6-550P-201ENST00000391057 LBRQ14739 615 aaKnown RBP5.85□□□□□ -1.47
RNU6-550P-201ENST00000391057 B4GALNT3Q6L9W6 998 aa5.85□□□□□ -1.47
RNU6-550P-201ENST00000391057 SV2AQ7L0J3 742 aa5.85□□□□□ -1.47
RNU6-550P-201ENST00000391057 ALDH16A1Q8IZ83 802 aa5.85□□□□□ -1.47
RNU6-550P-201ENST00000391057 ZNF775Q96BV0 537 aaPredicted RBP5.85□□□□□ -1.47
RNU6-550P-201ENST00000391057 ZNF837Q96EG3 531 aaPredicted RBP5.85□□□□□ -1.47
RNU6-550P-201ENST00000391057 MKNK1Q9BUB5 465 aa5.85□□□□□ -1.47
RNU6-550P-201ENST00000391057 CRISPLD1Q9H336 500 aa5.85□□□□□ -1.47
RNU6-550P-201ENST00000391057 CUEDC1Q9NWM3 386 aaPredicted RBP5.85□□□□□ -1.47
RNU6-550P-201ENST00000391057 GPC6Q9Y625 555 aaPredicted RBP5.85□□□□□ -1.47
RNU6-550P-201ENST00000391057 GJA3Q9Y6H8 435 aa5.85□□□□□ -1.47
RNU6-550P-201ENST00000391057 A0A1W2PNR3 127 aa5.84□□□□□ -1.47
RNU6-550P-201ENST00000391057 PTCD1O75127 700 aaKnown RBP5.84□□□□□ -1.47
RNU6-550P-201ENST00000391057 VWA5B2Q8N398 1253 aa5.84□□□□□ -1.47
RNU6-550P-201ENST00000391057 IRF7Q92985 503 aa5.84□□□□□ -1.47
RNU6-550P-201ENST00000391057 NEUROD4Q9HD90 331 aa5.84□□□□□ -1.47
RNU6-550P-201ENST00000391057 WFS1O76024 890 aa5.83□□□□□ -1.48
RNU6-550P-201ENST00000391057 NFX1Q12986 1120 aaKnown RBP5.83□□□□□ -1.48
RNU6-550P-201ENST00000391057 DBN1Q16643 649 aa5.83□□□□□ -1.48
RNU6-550P-201ENST00000391057 HIF1AQ16665 826 aa5.83□□□□□ -1.48
RNU6-550P-201ENST00000391057 RTN1Q16799 776 aa5.83□□□□□ -1.48
RNU6-550P-201ENST00000391057 FOXR1Q6PIV2 292 aa5.83□□□□□ -1.48
RNU6-550P-201ENST00000391057 NLRP8Q86W28 1048 aa5.83□□□□□ -1.48
RNU6-550P-201ENST00000391057 NANOS1Q8WY41 292 aaKnown RBP5.83□□□□□ -1.48
RNU6-550P-201ENST00000391057 COL26A1Q96A83 441 aa5.83□□□□□ -1.48
RNU6-550P-201ENST00000391057 ZIC5Q96T25 663 aa5.83□□□□□ -1.48
RNU6-550P-201ENST00000391057 THBS1P07996 1170 aa5.82□□□□□ -1.48
RNU6-550P-201ENST00000391057 VSIG8P0DPA2 414 aa5.82□□□□□ -1.48
RNU6-550P-201ENST00000391057 SSFA2P28290 1259 aa5.82□□□□□ -1.48
RNU6-550P-201ENST00000391057 FIGNL1Q6PIW4 674 aa5.82□□□□□ -1.48
RNU6-550P-201ENST00000391057 GTPBP3Q969Y2 492 aaKnown RBP5.82□□□□□ -1.48
RNU6-550P-201ENST00000391057 TRERF1Q96PN7 1200 aa5.82□□□□□ -1.48
RNU6-550P-201ENST00000391057 QTRT2Q9H974 415 aaKnown RBP5.82□□□□□ -1.48
RNU6-550P-201ENST00000391057 ERBB4Q15303 1308 aa5.81□□□□□ -1.48
RNU6-550P-201ENST00000391057 LRRC69Q6ZNQ3 347 aa5.81□□□□□ -1.48
RNU6-550P-201ENST00000391057 ANKIB1Q9P2G1 1089 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms