RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 FMNL2Q96PY5 1086 aa21.15■□□□□ 0.98
SNRPB-201ENST00000381342 TSPYL4Q9UJ04 414 aa21.15■□□□□ 0.98
SNRPB-201ENST00000381342 SALL2Q9Y467 1007 aaPredicted RBP21.15■□□□□ 0.98
SNRPB-201ENST00000381342 LAS1LQ9Y4W2 734 aaKnown RBP21.14■□□□□ 0.97
SNRPB-201ENST00000381342 C4AP0C0L4 1744 aa21.14■□□□□ 0.97
SNRPB-201ENST00000381342 ADRA2BP18089 450 aa21.13■□□□□ 0.97
SNRPB-201ENST00000381342 VSIG10Q8N0Z9 540 aa21.13■□□□□ 0.97
SNRPB-201ENST00000381342 CNTNAP4Q9C0A0 1308 aa21.12■□□□□ 0.97
SNRPB-201ENST00000381342 RPS6KA4O75676 772 aa21.12■□□□□ 0.97
SNRPB-201ENST00000381342 RFC4P35249 363 aa21.12■□□□□ 0.97
SNRPB-201ENST00000381342 GPR162Q16538 588 aa21.12■□□□□ 0.97
SNRPB-201ENST00000381342 CCDC27Q2M243 656 aa21.12■□□□□ 0.97
SNRPB-201ENST00000381342 SMIM5Q71RC9 77 aa21.12■□□□□ 0.97
SNRPB-201ENST00000381342 WWC1Q8IX03 1113 aa21.12■□□□□ 0.97
SNRPB-201ENST00000381342 AMIGO3Q86WK7 504 aa21.11■□□□□ 0.97
SNRPB-201ENST00000381342 PRAMEF22A3QJZ6 481 aa21.1■□□□□ 0.97
SNRPB-201ENST00000381342 YY1P25490 414 aa21.1■□□□□ 0.97
SNRPB-201ENST00000381342 CRKLP46109 303 aaKnown RBP21.1■□□□□ 0.97
SNRPB-201ENST00000381342 PELP1Q8IZL8 1130 aaKnown RBP21.1■□□□□ 0.97
SNRPB-201ENST00000381342 CHL1O00533 1208 aa21.09■□□□□ 0.97
SNRPB-201ENST00000381342 CYP19A1P11511 503 aaPredicted RBP21.09■□□□□ 0.97
SNRPB-201ENST00000381342 EIF4A1P60842 406 aaKnown RBP21.09■□□□□ 0.97
SNRPB-201ENST00000381342 CALD1Q05682 793 aaKnown RBP21.09■□□□□ 0.97
SNRPB-201ENST00000381342 NCBP3Q53F19 620 aaKnown RBP21.09■□□□□ 0.97
SNRPB-201ENST00000381342 NLGN1Q8N2Q7 840 aa21.09■□□□□ 0.97
SNRPB-201ENST00000381342 BABAM1Q9NWV8 329 aa21.09■□□□□ 0.97
SNRPB-201ENST00000381342 ARHGEF1Q92888 912 aaKnown RBP21.08■□□□□ 0.97
SNRPB-201ENST00000381342 CFAP44Q96MT7 982 aa21.08■□□□□ 0.97
SNRPB-201ENST00000381342 IFT57Q9NWB7 429 aa21.08■□□□□ 0.97
SNRPB-201ENST00000381342 CD2APQ9Y5K6 639 aa21.08■□□□□ 0.97
SNRPB-201ENST00000381342 COL24A1Q17RW2 1714 aa21.07■□□□□ 0.96
SNRPB-201ENST00000381342 SNRPA1P09661 255 aaKnown RBP21.07■□□□□ 0.96
SNRPB-201ENST00000381342 ZNF853P0CG23 659 aa21.07■□□□□ 0.96
SNRPB-201ENST00000381342 MBIPQ9NS73 344 aa21.07■□□□□ 0.96
SNRPB-201ENST00000381342 CCDC87Q9NVE4 849 aa21.07■□□□□ 0.96
SNRPB-201ENST00000381342 GNAI1P63096 354 aa21.06■□□□□ 0.96
SNRPB-201ENST00000381342 INTS5Q6P9B9 1019 aaKnown RBP21.06■□□□□ 0.96
SNRPB-201ENST00000381342 ZBTB1Q9Y2K1 713 aa21.06■□□□□ 0.96
SNRPB-201ENST00000381342 KRT24Q2M2I5 525 aa21.05■□□□□ 0.96
SNRPB-201ENST00000381342 NGEFQ8N5V2 710 aa21.05■□□□□ 0.96
SNRPB-201ENST00000381342 USP16Q9Y5T5 823 aa21.05■□□□□ 0.96
SNRPB-201ENST00000381342 GIGYF1O75420 1035 aaPredicted RBP21.04■□□□□ 0.96
SNRPB-201ENST00000381342 STARD3NLO95772 234 aa21.04■□□□□ 0.96
SNRPB-201ENST00000381342 NLGN2Q8NFZ4 835 aa21.04■□□□□ 0.96
SNRPB-201ENST00000381342 TEX13AQ9BXU3 409 aaPredicted RBP21.04■□□□□ 0.96
SNRPB-201ENST00000381342 MMP10P09238 476 aa21.03■□□□□ 0.96
SNRPB-201ENST00000381342 TSR2Q969E8 191 aaKnown RBP21.03■□□□□ 0.96
SNRPB-201ENST00000381342 IL16Q14005 1332 aa21.03■□□□□ 0.96
SNRPB-201ENST00000381342 ZNF521Q96K83 1311 aa21.03■□□□□ 0.96
SNRPB-201ENST00000381342 SCN7AQ01118 1682 aa21.02■□□□□ 0.96
SNRPB-201ENST00000381342 ZPR1O75312 459 aa21.02■□□□□ 0.96
SNRPB-201ENST00000381342 NPM2Q86SE8 214 aaKnown RBP21.02■□□□□ 0.96
SNRPB-201ENST00000381342 WDR63Q8IWG1 891 aa21.02■□□□□ 0.96
SNRPB-201ENST00000381342 PARP3Q9Y6F1 533 aa21.02■□□□□ 0.96
SNRPB-201ENST00000381342 SOS1Q07889 1333 aaPredicted RBP21.02■□□□□ 0.95
SNRPB-201ENST00000381342 COL15A1P39059 1388 aa21.01■□□□□ 0.95
SNRPB-201ENST00000381342 BCORQ6W2J9 1755 aa21.01■□□□□ 0.95
SNRPB-201ENST00000381342 GRIN3BO60391 1043 aa21.01■□□□□ 0.95
SNRPB-201ENST00000381342 A1BGP04217 495 aa21.01■□□□□ 0.95
SNRPB-201ENST00000381342 CANXP27824 592 aaKnown RBP21.01■□□□□ 0.95
SNRPB-201ENST00000381342 PIP4K2AP48426 406 aaPredicted RBP21.01■□□□□ 0.95
SNRPB-201ENST00000381342 GYS1P13807 737 aa21■□□□□ 0.95
SNRPB-201ENST00000381342 SPINK5Q9NQ38 1064 aaPredicted RBP20.99■□□□□ 0.95
SNRPB-201ENST00000381342 FANCIQ9NVI1 1328 aa20.99■□□□□ 0.95
SNRPB-201ENST00000381342 ZNF330Q9Y3S2 320 aaPredicted RBP20.98■□□□□ 0.95
SNRPB-201ENST00000381342 A0A087WZG4 1122 aa20.96■□□□□ 0.95
SNRPB-201ENST00000381342 NBPF26B4DH59 902 aa20.96■□□□□ 0.95
SNRPB-201ENST00000381342 EIF2S2P20042 333 aaKnown RBP20.96■□□□□ 0.95
SNRPB-201ENST00000381342 NBPF10Q6P3W6 841 aaKnown RBP20.96■□□□□ 0.95
SNRPB-201ENST00000381342 NBPF15Q8N660 670 aa20.96■□□□□ 0.95
SNRPB-201ENST00000381342 NECTIN2Q92692 538 aa20.96■□□□□ 0.95
SNRPB-201ENST00000381342 SRP68Q9UHB9 627 aaKnown RBP20.96■□□□□ 0.95
SNRPB-201ENST00000381342 USP42Q9H9J4 1324 aaKnown RBP20.96■□□□□ 0.95
SNRPB-201ENST00000381342 EIF5P55010 431 aaKnown RBP20.95■□□□□ 0.94
SNRPB-201ENST00000381342 HNRNPUQ00839 825 aaKnown RBP eCLIP20.95■□□□□ 0.94
SNRPB-201ENST00000381342 DUSP27Q5VZP5 1158 aa20.95■□□□□ 0.94
SNRPB-201ENST00000381342 C8orf58Q8NAV2 365 aa20.95■□□□□ 0.94
SNRPB-201ENST00000381342 ELL2O00472 640 aaPredicted RBP20.94■□□□□ 0.94
SNRPB-201ENST00000381342 IL6STP40189 918 aaPredicted RBP20.94■□□□□ 0.94
SNRPB-201ENST00000381342 HOXB7P09629 217 aa20.93■□□□□ 0.94
SNRPB-201ENST00000381342 TGFB2P61812 414 aa20.93■□□□□ 0.94
SNRPB-201ENST00000381342 USPL1Q5W0Q7 1092 aa20.93■□□□□ 0.94
SNRPB-201ENST00000381342 TSPYL6Q8N831 410 aa20.93■□□□□ 0.94
SNRPB-201ENST00000381342 NARFQ9UHQ1 456 aa20.93■□□□□ 0.94
SNRPB-201ENST00000381342 MYL6BP14649 208 aa20.92■□□□□ 0.94
SNRPB-201ENST00000381342 GOLGA2Q08379 1002 aa20.92■□□□□ 0.94
SNRPB-201ENST00000381342 FKBP8Q14318 412 aa20.92■□□□□ 0.94
SNRPB-201ENST00000381342 HDGFL1Q5TGJ6 251 aa20.92■□□□□ 0.94
SNRPB-201ENST00000381342 MYH16Q9H6N6 1097 aa20.92■□□□□ 0.94
SNRPB-201ENST00000381342 ERBB4Q15303 1308 aa20.92■□□□□ 0.94
SNRPB-201ENST00000381342 PROSER3Q2NL68 480 aa20.91■□□□□ 0.94
SNRPB-201ENST00000381342 ANXA1P04083 346 aa20.9■□□□□ 0.94
SNRPB-201ENST00000381342 YBX3P16989 372 aaKnown RBP eCLIP20.9■□□□□ 0.942e-9■■■□□ 15.1
SNRPB-201ENST00000381342 EXOSC9Q06265 439 aaKnown RBP20.89■□□□□ 0.93
SNRPB-201ENST00000381342 PDIA6Q15084 440 aa20.89■□□□□ 0.93
SNRPB-201ENST00000381342 CDCA7LQ96GN5 454 aa20.89■□□□□ 0.93
SNRPB-201ENST00000381342 CHPF2Q9P2E5 772 aa20.89■□□□□ 0.93
SNRPB-201ENST00000381342 TBC1D2BQ9UPU7 963 aa20.89■□□□□ 0.93
SNRPB-201ENST00000381342 NUP98P52948 1817 aa20.88■□□□□ 0.93
SNRPB-201ENST00000381342 E9PSI1 815 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms