RNA–Protein interactions for RNA: ENST00000380491.7

C12orf54-202, Transcript of chromosome 12 open reading frame 54, humanhuman

TSL 1 (best)

Gene C12orf54, Length 820 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54-202ENST00000380491 IFT57Q9NWB7 429 aa13.14□□□□□ -0.31
C12orf54-202ENST00000380491 TUBGCP6Q96RT7 1819 aa13.13□□□□□ -0.31
C12orf54-202ENST00000380491 MYH14Q7Z406 1995 aaKnown RBP13.13□□□□□ -0.31
C12orf54-202ENST00000380491 PRAMEF22A3QJZ6 481 aa13.13□□□□□ -0.31
C12orf54-202ENST00000380491 GIGYF1O75420 1035 aaPredicted RBP13.13□□□□□ -0.31
C12orf54-202ENST00000380491 SNRPA1P09661 255 aaKnown RBP13.13□□□□□ -0.31
C12orf54-202ENST00000380491 CRKLP46109 303 aaKnown RBP13.13□□□□□ -0.31
C12orf54-202ENST00000380491 MBIPQ9NS73 344 aa13.13□□□□□ -0.31
C12orf54-202ENST00000380491 TFCP2L1Q9NZI6 479 aa13.13□□□□□ -0.31
C12orf54-202ENST00000380491 SRCAPQ6ZRS2 3230 aa13.13□□□□□ -0.31
C12orf54-202ENST00000380491 IL16Q14005 1332 aa13.13□□□□□ -0.31
C12orf54-202ENST00000380491 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
C12orf54-202ENST00000380491 UBR3Q6ZT12 1888 aa13.12□□□□□ -0.31
C12orf54-202ENST00000380491 STARD3NLO95772 234 aa13.12□□□□□ -0.31
C12orf54-202ENST00000380491 INTS5Q6P9B9 1019 aaKnown RBP13.12□□□□□ -0.31
C12orf54-202ENST00000380491 AMIGO3Q86WK7 504 aa13.12□□□□□ -0.31
C12orf54-202ENST00000380491 AK7Q96M32 723 aa13.12□□□□□ -0.31
C12orf54-202ENST00000380491 USP16Q9Y5T5 823 aa13.12□□□□□ -0.31
C12orf54-202ENST00000380491 PNPLA7Q6ZV29 1317 aa13.12□□□□□ -0.31
C12orf54-202ENST00000380491 GNPATO15228 680 aa13.11□□□□□ -0.31
C12orf54-202ENST00000380491 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
C12orf54-202ENST00000380491 PDGFDQ9GZP0 370 aaPredicted RBP13.11□□□□□ -0.31
C12orf54-202ENST00000380491 CCDC87Q9NVE4 849 aa13.11□□□□□ -0.31
C12orf54-202ENST00000380491 CASZ1Q86V15 1759 aa13.11□□□□□ -0.31
C12orf54-202ENST00000380491 LAMB4A4D0S4 1761 aa13.1□□□□□ -0.31
C12orf54-202ENST00000380491 KRT24Q2M2I5 525 aa13.1□□□□□ -0.31
C12orf54-202ENST00000380491 SMIM5Q71RC9 77 aa13.1□□□□□ -0.31
C12orf54-202ENST00000380491 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
C12orf54-202ENST00000380491 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.09□□□□□ -0.31
C12orf54-202ENST00000380491 SSFA2P28290 1259 aa13.09□□□□□ -0.31
C12orf54-202ENST00000380491 COL23A1Q86Y22 540 aaPredicted RBP13.09□□□□□ -0.31
C12orf54-202ENST00000380491 FLAD1Q8NFF5 587 aa13.09□□□□□ -0.31
C12orf54-202ENST00000380491 TSR2Q969E8 191 aaKnown RBP13.09□□□□□ -0.31
C12orf54-202ENST00000380491 SPINK5Q9NQ38 1064 aaPredicted RBP13.09□□□□□ -0.31
C12orf54-202ENST00000380491 ZBTB1Q9Y2K1 713 aa13.09□□□□□ -0.31
C12orf54-202ENST00000380491 A1BGP04217 495 aa13.08□□□□□ -0.32
C12orf54-202ENST00000380491 TRAPPC3LQ5T215 181 aa13.08□□□□□ -0.32
C12orf54-202ENST00000380491 SOS1Q07889 1333 aaPredicted RBP13.08□□□□□ -0.32
C12orf54-202ENST00000380491 PHF14O94880 888 aa13.07□□□□□ -0.32
C12orf54-202ENST00000380491 CANXP27824 592 aaKnown RBP13.07□□□□□ -0.32
C12orf54-202ENST00000380491 ARHGEF1Q92888 912 aaKnown RBP13.07□□□□□ -0.32
C12orf54-202ENST00000380491 FANCIQ9NVI1 1328 aa13.07□□□□□ -0.32
C12orf54-202ENST00000380491 NBPF26B4DH59 902 aa13.06□□□□□ -0.32
C12orf54-202ENST00000380491 HOXB7P09629 217 aa13.06□□□□□ -0.32
C12orf54-202ENST00000380491 IL6STP40189 918 aaPredicted RBP13.06□□□□□ -0.32
C12orf54-202ENST00000380491 EIF5P55010 431 aaKnown RBP13.06□□□□□ -0.32
C12orf54-202ENST00000380491 HNRNPUQ00839 825 aaKnown RBP eCLIP13.06□□□□□ -0.32
C12orf54-202ENST00000380491 GOLGA2Q08379 1002 aa13.06□□□□□ -0.32
C12orf54-202ENST00000380491 DUSP27Q5VZP5 1158 aa13.06□□□□□ -0.32
C12orf54-202ENST00000380491 NBPF10Q6P3W6 841 aaKnown RBP13.06□□□□□ -0.32
C12orf54-202ENST00000380491 NBPF15Q8N660 670 aa13.06□□□□□ -0.32
C12orf54-202ENST00000380491 C8orf58Q8NAV2 365 aa13.06□□□□□ -0.32
C12orf54-202ENST00000380491 SLC16A10Q8TF71 515 aa13.06□□□□□ -0.32
C12orf54-202ENST00000380491 C4AP0C0L4 1744 aa13.05□□□□□ -0.32
C12orf54-202ENST00000380491 EIF2S2P20042 333 aaKnown RBP13.05□□□□□ -0.32
C12orf54-202ENST00000380491 MYH16Q9H6N6 1097 aa13.05□□□□□ -0.32
C12orf54-202ENST00000380491 ELL2O00472 640 aaPredicted RBP13.04□□□□□ -0.32
C12orf54-202ENST00000380491 ZBTB7AO95365 584 aa13.04□□□□□ -0.32
C12orf54-202ENST00000380491 RFC4P35249 363 aa13.04□□□□□ -0.32
C12orf54-202ENST00000380491 PIP4K2AP48426 406 aaPredicted RBP13.04□□□□□ -0.32
C12orf54-202ENST00000380491 SLFN5Q08AF3 891 aa13.04□□□□□ -0.32
C12orf54-202ENST00000380491 TSPYL6Q8N831 410 aa13.04□□□□□ -0.32
C12orf54-202ENST00000380491 CDCA7LQ96GN5 454 aa13.04□□□□□ -0.32
C12orf54-202ENST00000380491 MTFR1LQ9H019 292 aa13.04□□□□□ -0.32
C12orf54-202ENST00000380491 ERBB4Q15303 1308 aa13.04□□□□□ -0.32
C12orf54-202ENST00000380491 COL15A1P39059 1388 aa13.04□□□□□ -0.32
C12orf54-202ENST00000380491 COL24A1Q17RW2 1714 aa13.03□□□□□ -0.32
C12orf54-202ENST00000380491 E9PSI1 815 aa13.03□□□□□ -0.32
C12orf54-202ENST00000380491 PDIA6Q15084 440 aa13.03□□□□□ -0.32
C12orf54-202ENST00000380491 A0A087WZG4 1122 aa13.02□□□□□ -0.33
C12orf54-202ENST00000380491 EXOSC9Q06265 439 aaKnown RBP13.02□□□□□ -0.33
C12orf54-202ENST00000380491 TWISTNBQ3B726 338 aaPredicted RBP13.02□□□□□ -0.33
C12orf54-202ENST00000380491 HDGFL1Q5TGJ6 251 aa13.02□□□□□ -0.33
C12orf54-202ENST00000380491 TRMT2AQ8IZ69 625 aaKnown RBP13.02□□□□□ -0.33
C12orf54-202ENST00000380491 NECTIN2Q92692 538 aa13.02□□□□□ -0.33
C12orf54-202ENST00000380491 SRP68Q9UHB9 627 aaKnown RBP13.02□□□□□ -0.33
C12orf54-202ENST00000380491 NARFQ9UHQ1 456 aa13.02□□□□□ -0.33
C12orf54-202ENST00000380491 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
C12orf54-202ENST00000380491 ZNF330Q9Y3S2 320 aaPredicted RBP13.02□□□□□ -0.33
C12orf54-202ENST00000380491 USP42Q9H9J4 1324 aaKnown RBP13.02□□□□□ -0.33
C12orf54-202ENST00000380491 MYL6BP14649 208 aa13.01□□□□□ -0.33
C12orf54-202ENST00000380491 PROSER3Q2NL68 480 aa13.01□□□□□ -0.33
C12orf54-202ENST00000380491 LRP10Q7Z4F1 713 aa13.01□□□□□ -0.33
C12orf54-202ENST00000380491 SPON1Q9HCB6 807 aa13.01□□□□□ -0.33
C12orf54-202ENST00000380491 ZBED9Q6R2W3 1325 aa13□□□□□ -0.33
C12orf54-202ENST00000380491 ZPR1O75312 459 aa13□□□□□ -0.33
C12orf54-202ENST00000380491 VAMP4O75379 141 aa13□□□□□ -0.33
C12orf54-202ENST00000380491 ANXA1P04083 346 aa13□□□□□ -0.33
C12orf54-202ENST00000380491 GYS1P13807 737 aa13□□□□□ -0.33
C12orf54-202ENST00000380491 PTGER2P43116 358 aa13□□□□□ -0.33
C12orf54-202ENST00000380491 USPL1Q5W0Q7 1092 aa13□□□□□ -0.33
C12orf54-202ENST00000380491 NPM2Q86SE8 214 aaKnown RBP13□□□□□ -0.33
C12orf54-202ENST00000380491 SGIP1Q9BQI5 828 aa13□□□□□ -0.33
C12orf54-202ENST00000380491 DDX21Q9NR30 783 aaKnown RBP eCLIP13□□□□□ -0.33
C12orf54-202ENST00000380491 CHPF2Q9P2E5 772 aa13□□□□□ -0.33
C12orf54-202ENST00000380491 DBF4Q9UBU7 674 aaPredicted RBP13□□□□□ -0.33
C12orf54-202ENST00000380491 TBC1D2BQ9UPU7 963 aa13□□□□□ -0.33
C12orf54-202ENST00000380491 LRP5O75197 1615 aa12.99□□□□□ -0.33
C12orf54-202ENST00000380491 CCDC30Q5VVM6 783 aa12.99□□□□□ -0.33
C12orf54-202ENST00000380491 MSL1Q68DK7 614 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms