RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 CCDC87Q9NVE4 849 aa24.41■■□□□ 1.5
SSU72-203ENST00000378725 GNPATO15228 680 aa24.4■■□□□ 1.5
SSU72-203ENST00000378725 FLAD1Q8NFF5 587 aa24.4■■□□□ 1.5
SSU72-203ENST00000378725 SSFA2P28290 1259 aa24.39■■□□□ 1.49
SSU72-203ENST00000378725 RTCBQ9Y3I0 505 aaKnown RBP24.39■■□□□ 1.49
SSU72-203ENST00000378725 COL23A1Q86Y22 540 aaPredicted RBP24.38■■□□□ 1.49
SSU72-203ENST00000378725 PDGFDQ9GZP0 370 aaPredicted RBP24.38■■□□□ 1.49
SSU72-203ENST00000378725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.36■■□□□ 1.49
SSU72-203ENST00000378725 A1BGP04217 495 aa24.36■■□□□ 1.49
SSU72-203ENST00000378725 ADRA2BP18089 450 aa24.36■■□□□ 1.49
SSU72-203ENST00000378725 SMIM5Q71RC9 77 aa24.36■■□□□ 1.49
SSU72-203ENST00000378725 ZBTB1Q9Y2K1 713 aa24.36■■□□□ 1.49
SSU72-203ENST00000378725 QSER1Q2KHR3 1735 aa24.35■■□□□ 1.49
SSU72-203ENST00000378725 KRT24Q2M2I5 525 aa24.35■■□□□ 1.49
SSU72-203ENST00000378725 TRAPPC3LQ5T215 181 aa24.35■■□□□ 1.49
SSU72-203ENST00000378725 SPINK5Q9NQ38 1064 aaPredicted RBP24.35■■□□□ 1.49
SSU72-203ENST00000378725 SOS1Q07889 1333 aaPredicted RBP24.35■■□□□ 1.49
SSU72-203ENST00000378725 HOXB7P09629 217 aa24.34■■□□□ 1.49
SSU72-203ENST00000378725 SLC16A10Q8TF71 515 aa24.34■■□□□ 1.49
SSU72-203ENST00000378725 MYH14Q7Z406 1995 aaKnown RBP24.34■■□□□ 1.49
SSU72-203ENST00000378725 PHF14O94880 888 aa24.33■■□□□ 1.49
SSU72-203ENST00000378725 CANXP27824 592 aaKnown RBP24.33■■□□□ 1.49
SSU72-203ENST00000378725 ARHGEF1Q92888 912 aaKnown RBP24.33■■□□□ 1.49
SSU72-203ENST00000378725 TSR2Q969E8 191 aaKnown RBP24.33■■□□□ 1.49
SSU72-203ENST00000378725 UBR3Q6ZT12 1888 aa24.32■■□□□ 1.48
SSU72-203ENST00000378725 EIF5P55010 431 aaKnown RBP24.32■■□□□ 1.48
SSU72-203ENST00000378725 TUBGCP6Q96RT7 1819 aa24.32■■□□□ 1.48
SSU72-203ENST00000378725 CASZ1Q86V15 1759 aa24.31■■□□□ 1.48
SSU72-203ENST00000378725 IL6STP40189 918 aaPredicted RBP24.31■■□□□ 1.48
SSU72-203ENST00000378725 GOLGA2Q08379 1002 aa24.31■■□□□ 1.48
SSU72-203ENST00000378725 DUSP27Q5VZP5 1158 aa24.31■■□□□ 1.48
SSU72-203ENST00000378725 C8orf58Q8NAV2 365 aa24.31■■□□□ 1.48
SSU72-203ENST00000378725 FANCIQ9NVI1 1328 aa24.31■■□□□ 1.48
SSU72-203ENST00000378725 NBPF26B4DH59 902 aa24.3■■□□□ 1.48
SSU72-203ENST00000378725 NBPF10Q6P3W6 841 aaKnown RBP24.3■■□□□ 1.48
SSU72-203ENST00000378725 NBPF15Q8N660 670 aa24.3■■□□□ 1.48
SSU72-203ENST00000378725 MYH16Q9H6N6 1097 aa24.3■■□□□ 1.48
SSU72-203ENST00000378725 MSH5O43196 834 aa24.29■■□□□ 1.48
SSU72-203ENST00000378725 ERBB4Q15303 1308 aa24.29■■□□□ 1.48
SSU72-203ENST00000378725 EIF2S2P20042 333 aaKnown RBP24.28■■□□□ 1.48
SSU72-203ENST00000378725 HNRNPUQ00839 825 aaKnown RBP eCLIP24.28■■□□□ 1.48
SSU72-203ENST00000378725 MTFR1LQ9H019 292 aa24.28■■□□□ 1.48
SSU72-203ENST00000378725 E9PSI1 815 aa24.27■■□□□ 1.48
SSU72-203ENST00000378725 ZBTB7AO95365 584 aa24.27■■□□□ 1.48
SSU72-203ENST00000378725 RFC4P35249 363 aa24.27■■□□□ 1.48
SSU72-203ENST00000378725 SLFN5Q08AF3 891 aa24.27■■□□□ 1.48
SSU72-203ENST00000378725 TSPYL6Q8N831 410 aa24.27■■□□□ 1.48
SSU72-203ENST00000378725 COL15A1P39059 1388 aa24.27■■□□□ 1.48
SSU72-203ENST00000378725 LAMB4A4D0S4 1761 aa24.26■■□□□ 1.47
SSU72-203ENST00000378725 A0A087WZG4 1122 aa24.26■■□□□ 1.47
SSU72-203ENST00000378725 PIP4K2AP48426 406 aaPredicted RBP24.26■■□□□ 1.47
SSU72-203ENST00000378725 PDIA6Q15084 440 aa24.26■■□□□ 1.47
SSU72-203ENST00000378725 ELL2O00472 640 aaPredicted RBP24.25■■□□□ 1.47
SSU72-203ENST00000378725 TRMT2AQ8IZ69 625 aaKnown RBP24.25■■□□□ 1.47
SSU72-203ENST00000378725 HDGFL1Q5TGJ6 251 aa24.24■■□□□ 1.47
SSU72-203ENST00000378725 CDCA7LQ96GN5 454 aa24.24■■□□□ 1.47
SSU72-203ENST00000378725 SPON1Q9HCB6 807 aa24.24■■□□□ 1.47
SSU72-203ENST00000378725 NARFQ9UHQ1 456 aa24.24■■□□□ 1.47
SSU72-203ENST00000378725 USP42Q9H9J4 1324 aaKnown RBP24.24■■□□□ 1.47
SSU72-203ENST00000378725 EXOSC9Q06265 439 aaKnown RBP24.23■■□□□ 1.47
SSU72-203ENST00000378725 LRP10Q7Z4F1 713 aa24.23■■□□□ 1.47
SSU72-203ENST00000378725 CHMP4AQ9BY43 222 aa24.23■■□□□ 1.47
SSU72-203ENST00000378725 ATF5Q9Y2D1 282 aaPredicted RBP24.23■■□□□ 1.47
SSU72-203ENST00000378725 GYS1P13807 737 aa24.22■■□□□ 1.47
SSU72-203ENST00000378725 TWISTNBQ3B726 338 aaPredicted RBP24.22■■□□□ 1.47
SSU72-203ENST00000378725 NECTIN2Q92692 538 aa24.22■■□□□ 1.47
SSU72-203ENST00000378725 SGIP1Q9BQI5 828 aa24.22■■□□□ 1.47
SSU72-203ENST00000378725 DDX21Q9NR30 783 aaKnown RBP eCLIP24.22■■□□□ 1.47
SSU72-203ENST00000378725 SRP68Q9UHB9 627 aaKnown RBP24.22■■□□□ 1.47
SSU72-203ENST00000378725 ZPR1O75312 459 aa24.21■■□□□ 1.47
SSU72-203ENST00000378725 VAMP4O75379 141 aa24.21■■□□□ 1.47
SSU72-203ENST00000378725 PTGER2P43116 358 aa24.21■■□□□ 1.47
SSU72-203ENST00000378725 NPM2Q86SE8 214 aaKnown RBP24.21■■□□□ 1.47
SSU72-203ENST00000378725 ZNF330Q9Y3S2 320 aaPredicted RBP24.21■■□□□ 1.47
SSU72-203ENST00000378725 MYL6BP14649 208 aa24.2■■□□□ 1.46
SSU72-203ENST00000378725 PROSER3Q2NL68 480 aa24.2■■□□□ 1.46
SSU72-203ENST00000378725 USPL1Q5W0Q7 1092 aa24.2■■□□□ 1.46
SSU72-203ENST00000378725 NLGN1Q8N2Q7 840 aa24.2■■□□□ 1.46
SSU72-203ENST00000378725 DBF4Q9UBU7 674 aaPredicted RBP24.2■■□□□ 1.46
SSU72-203ENST00000378725 TBC1D2BQ9UPU7 963 aa24.2■■□□□ 1.46
SSU72-203ENST00000378725 CCDC30Q5VVM6 783 aa24.19■■□□□ 1.46
SSU72-203ENST00000378725 DZIP3Q86Y13 1208 aaKnown RBP24.19■■□□□ 1.46
SSU72-203ENST00000378725 BCL2L12Q9HB09 334 aa24.19■■□□□ 1.46
SSU72-203ENST00000378725 CHPF2Q9P2E5 772 aa24.19■■□□□ 1.46
SSU72-203ENST00000378725 ZBED9Q6R2W3 1325 aa24.18■■□□□ 1.46
SSU72-203ENST00000378725 MSL1Q68DK7 614 aa24.18■■□□□ 1.46
SSU72-203ENST00000378725 C4AP0C0L4 1744 aa24.18■■□□□ 1.46
SSU72-203ENST00000378725 RGL2O15211 777 aa24.17■■□□□ 1.46
SSU72-203ENST00000378725 CAMTA2O94983 1202 aa24.17■■□□□ 1.46
SSU72-203ENST00000378725 ANXA1P04083 346 aa24.17■■□□□ 1.46
SSU72-203ENST00000378725 COL24A1Q17RW2 1714 aa24.16■■□□□ 1.46
SSU72-203ENST00000378725 FKBP8Q14318 412 aa24.16■■□□□ 1.46
SSU72-203ENST00000378725 ARXQ96QS3 562 aa24.15■■□□□ 1.46
SSU72-203ENST00000378725 HYPKQ9NX55 129 aa24.15■■□□□ 1.46
SSU72-203ENST00000378725 ERVV-1B6SEH8 477 aa24.14■■□□□ 1.45
SSU72-203ENST00000378725 POLD1P28340 1107 aa24.14■■□□□ 1.45
SSU72-203ENST00000378725 TM4SF1P30408 202 aa24.14■■□□□ 1.45
SSU72-203ENST00000378725 CLEC4GQ6UXB4 293 aa24.14■■□□□ 1.45
SSU72-203ENST00000378725 TTLL7Q6ZT98 887 aa24.14■■□□□ 1.45
SSU72-203ENST00000378725 COPS6Q7L5N1 327 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms