RNA–Protein interactions for RNA: ENST00000378549.5

ITM2B-201, Transcript of integral membrane protein 2B, humanhuman

TSL 5 BASIC

Gene ITM2B, Length 805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-201ENST00000378549 MBIPQ9NS73 344 aa22.44■■□□□ 1.18
ITM2B-201ENST00000378549 CCDC87Q9NVE4 849 aa22.44■■□□□ 1.18
ITM2B-201ENST00000378549 PNPLA7Q6ZV29 1317 aa22.43■■□□□ 1.18
ITM2B-201ENST00000378549 RTCBQ9Y3I0 505 aaKnown RBP22.43■■□□□ 1.18
ITM2B-201ENST00000378549 PHF14O94880 888 aa22.42■■□□□ 1.18
ITM2B-201ENST00000378549 SSFA2P28290 1259 aa22.42■■□□□ 1.18
ITM2B-201ENST00000378549 PRAMEF22A3QJZ6 481 aa22.41■■□□□ 1.18
ITM2B-201ENST00000378549 MSH5O43196 834 aa22.41■■□□□ 1.18
ITM2B-201ENST00000378549 GIGYF1O75420 1035 aaPredicted RBP22.41■■□□□ 1.18
ITM2B-201ENST00000378549 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.4■■□□□ 1.18
ITM2B-201ENST00000378549 RPS6KA4O75676 772 aa22.4■■□□□ 1.18
ITM2B-201ENST00000378549 INTS5Q6P9B9 1019 aaKnown RBP22.4■■□□□ 1.18
ITM2B-201ENST00000378549 ZBTB1Q9Y2K1 713 aa22.4■■□□□ 1.18
ITM2B-201ENST00000378549 USP16Q9Y5T5 823 aa22.4■■□□□ 1.18
ITM2B-201ENST00000378549 ADRA2BP18089 450 aa22.39■■□□□ 1.17
ITM2B-201ENST00000378549 ZNF521Q96K83 1311 aa22.38■■□□□ 1.17
ITM2B-201ENST00000378549 CANXP27824 592 aaKnown RBP22.37■■□□□ 1.17
ITM2B-201ENST00000378549 TRAPPC3LQ5T215 181 aa22.37■■□□□ 1.17
ITM2B-201ENST00000378549 AMIGO3Q86WK7 504 aa22.37■■□□□ 1.17
ITM2B-201ENST00000378549 COL23A1Q86Y22 540 aaPredicted RBP22.37■■□□□ 1.17
ITM2B-201ENST00000378549 TSR2Q969E8 191 aaKnown RBP22.37■■□□□ 1.17
ITM2B-201ENST00000378549 PDGFDQ9GZP0 370 aaPredicted RBP22.37■■□□□ 1.17
ITM2B-201ENST00000378549 SOS1Q07889 1333 aaPredicted RBP22.36■■□□□ 1.17
ITM2B-201ENST00000378549 KRT24Q2M2I5 525 aa22.36■■□□□ 1.17
ITM2B-201ENST00000378549 NPM2Q86SE8 214 aaKnown RBP22.36■■□□□ 1.17
ITM2B-201ENST00000378549 MYH16Q9H6N6 1097 aa22.36■■□□□ 1.17
ITM2B-201ENST00000378549 COL24A1Q17RW2 1714 aa22.36■■□□□ 1.17
ITM2B-201ENST00000378549 COL15A1P39059 1388 aa22.36■■□□□ 1.17
ITM2B-201ENST00000378549 FANCIQ9NVI1 1328 aa22.35■■□□□ 1.17
ITM2B-201ENST00000378549 A1BGP04217 495 aa22.35■■□□□ 1.17
ITM2B-201ENST00000378549 HOXB7P09629 217 aa22.35■■□□□ 1.17
ITM2B-201ENST00000378549 HNRNPUQ00839 825 aaKnown RBP eCLIP22.35■■□□□ 1.17
ITM2B-201ENST00000378549 SMIM5Q71RC9 77 aa22.35■■□□□ 1.17
ITM2B-201ENST00000378549 SLC16A10Q8TF71 515 aa22.35■■□□□ 1.17
ITM2B-201ENST00000378549 ZNF330Q9Y3S2 320 aaPredicted RBP22.35■■□□□ 1.17
ITM2B-201ENST00000378549 CACNA1FO60840 1977 aa22.35■■□□□ 1.17
ITM2B-201ENST00000378549 LRP5O75197 1615 aa22.35■■□□□ 1.17
ITM2B-201ENST00000378549 SCN7AQ01118 1682 aa22.34■■□□□ 1.17
ITM2B-201ENST00000378549 RFC4P35249 363 aa22.34■■□□□ 1.17
ITM2B-201ENST00000378549 GOLGA2Q08379 1002 aa22.34■■□□□ 1.17
ITM2B-201ENST00000378549 BCORQ6W2J9 1755 aa22.34■■□□□ 1.17
ITM2B-201ENST00000378549 ZBTB7AO95365 584 aa22.33■■□□□ 1.17
ITM2B-201ENST00000378549 EIF2S2P20042 333 aaKnown RBP22.33■■□□□ 1.17
ITM2B-201ENST00000378549 IL6STP40189 918 aaPredicted RBP22.33■■□□□ 1.17
ITM2B-201ENST00000378549 DUSP27Q5VZP5 1158 aa22.33■■□□□ 1.17
ITM2B-201ENST00000378549 ARHGEF1Q92888 912 aaKnown RBP22.33■■□□□ 1.17
ITM2B-201ENST00000378549 MTFR1LQ9H019 292 aa22.33■■□□□ 1.17
ITM2B-201ENST00000378549 ERBB4Q15303 1308 aa22.32■■□□□ 1.16
ITM2B-201ENST00000378549 A0A087WZG4 1122 aa22.31■■□□□ 1.16
ITM2B-201ENST00000378549 PIP4K2AP48426 406 aaPredicted RBP22.31■■□□□ 1.16
ITM2B-201ENST00000378549 EIF5P55010 431 aaKnown RBP22.31■■□□□ 1.16
ITM2B-201ENST00000378549 HDGFL1Q5TGJ6 251 aa22.31■■□□□ 1.16
ITM2B-201ENST00000378549 E9PSI1 815 aa22.3■■□□□ 1.16
ITM2B-201ENST00000378549 ELL2O00472 640 aaPredicted RBP22.3■■□□□ 1.16
ITM2B-201ENST00000378549 SPON1Q9HCB6 807 aa22.3■■□□□ 1.16
ITM2B-201ENST00000378549 SPINK5Q9NQ38 1064 aaPredicted RBP22.3■■□□□ 1.16
ITM2B-201ENST00000378549 NBPF26B4DH59 902 aa22.29■■□□□ 1.16
ITM2B-201ENST00000378549 ZPR1O75312 459 aa22.29■■□□□ 1.16
ITM2B-201ENST00000378549 NBPF10Q6P3W6 841 aaKnown RBP22.29■■□□□ 1.16
ITM2B-201ENST00000378549 NBPF15Q8N660 670 aa22.29■■□□□ 1.16
ITM2B-201ENST00000378549 C8orf58Q8NAV2 365 aa22.29■■□□□ 1.16
ITM2B-201ENST00000378549 NECTIN2Q92692 538 aa22.29■■□□□ 1.16
ITM2B-201ENST00000378549 CHMP4AQ9BY43 222 aa22.29■■□□□ 1.16
ITM2B-201ENST00000378549 USP42Q9H9J4 1324 aaKnown RBP22.29■■□□□ 1.16
ITM2B-201ENST00000378549 ATF5Q9Y2D1 282 aaPredicted RBP22.28■■□□□ 1.16
ITM2B-201ENST00000378549 NUP98P52948 1817 aa22.28■■□□□ 1.16
ITM2B-201ENST00000378549 MYL6BP14649 208 aa22.27■■□□□ 1.16
ITM2B-201ENST00000378549 TWISTNBQ3B726 338 aaPredicted RBP22.27■■□□□ 1.16
ITM2B-201ENST00000378549 ARXQ96QS3 562 aa22.27■■□□□ 1.16
ITM2B-201ENST00000378549 MSL1Q68DK7 614 aa22.26■■□□□ 1.15
ITM2B-201ENST00000378549 TSPYL6Q8N831 410 aa22.26■■□□□ 1.15
ITM2B-201ENST00000378549 SRP68Q9UHB9 627 aaKnown RBP22.26■■□□□ 1.15
ITM2B-201ENST00000378549 NARFQ9UHQ1 456 aa22.26■■□□□ 1.15
ITM2B-201ENST00000378549 POLD1P28340 1107 aa22.25■■□□□ 1.15
ITM2B-201ENST00000378549 EXOSC9Q06265 439 aaKnown RBP22.25■■□□□ 1.15
ITM2B-201ENST00000378549 SLFN5Q08AF3 891 aa22.25■■□□□ 1.15
ITM2B-201ENST00000378549 DZIP3Q86Y13 1208 aaKnown RBP22.25■■□□□ 1.15
ITM2B-201ENST00000378549 GYS1P13807 737 aa22.24■■□□□ 1.15
ITM2B-201ENST00000378549 USPL1Q5W0Q7 1092 aa22.24■■□□□ 1.15
ITM2B-201ENST00000378549 DDX21Q9NR30 783 aaKnown RBP eCLIP22.24■■□□□ 1.15
ITM2B-201ENST00000378549 CHPF2Q9P2E5 772 aa22.24■■□□□ 1.15
ITM2B-201ENST00000378549 DBF4Q9UBU7 674 aaPredicted RBP22.24■■□□□ 1.15
ITM2B-201ENST00000378549 TBC1D2BQ9UPU7 963 aa22.24■■□□□ 1.15
ITM2B-201ENST00000378549 ZBED9Q6R2W3 1325 aa22.24■■□□□ 1.15
ITM2B-201ENST00000378549 CCDC30Q5VVM6 783 aa22.23■■□□□ 1.15
ITM2B-201ENST00000378549 NLGN1Q8N2Q7 840 aa22.23■■□□□ 1.15
ITM2B-201ENST00000378549 CDCA7LQ96GN5 454 aa22.23■■□□□ 1.15
ITM2B-201ENST00000378549 ANKRD36CQ5JPF3 1778 aa22.22■■□□□ 1.15
ITM2B-201ENST00000378549 PDIA6Q15084 440 aa22.22■■□□□ 1.15
ITM2B-201ENST00000378549 PROSER3Q2NL68 480 aa22.22■■□□□ 1.15
ITM2B-201ENST00000378549 KIF6Q6ZMV9 814 aa22.22■■□□□ 1.15
ITM2B-201ENST00000378549 ANXA1P04083 346 aa22.21■■□□□ 1.15
ITM2B-201ENST00000378549 PTGER2P43116 358 aa22.21■■□□□ 1.15
ITM2B-201ENST00000378549 STK31Q9BXU1 1019 aa22.21■■□□□ 1.15
ITM2B-201ENST00000378549 AFDNP55196 1824 aaKnown RBP22.21■■□□□ 1.15
ITM2B-201ENST00000378549 HYPKQ9NX55 129 aa22.2■■□□□ 1.14
ITM2B-201ENST00000378549 PPP1R1BQ9UD71 204 aaPredicted RBP22.2■■□□□ 1.14
ITM2B-201ENST00000378549 ZNF652Q9Y2D9 606 aa22.2■■□□□ 1.14
ITM2B-201ENST00000378549 ARFGEF2Q9Y6D5 1785 aa22.2■■□□□ 1.14
ITM2B-201ENST00000378549 CAMTA2O94983 1202 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms