RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 SLC16A10Q8TF71 515 aa29.61■■■□□ 2.33
YIF1A-202ENST00000376899 RTCBQ9Y3I0 505 aaKnown RBP29.61■■■□□ 2.33
YIF1A-202ENST00000376899 ZNF853P0CG23 659 aa29.6■■■□□ 2.33
YIF1A-202ENST00000376899 NGEFQ8N5V2 710 aa29.6■■■□□ 2.33
YIF1A-202ENST00000376899 CFAP44Q96MT7 982 aa29.6■■■□□ 2.33
YIF1A-202ENST00000376899 ADRA2BP18089 450 aa29.59■■■□□ 2.33
YIF1A-202ENST00000376899 WWC1Q8IX03 1113 aa29.59■■■□□ 2.33
YIF1A-202ENST00000376899 PHF14O94880 888 aa29.58■■■□□ 2.33
YIF1A-202ENST00000376899 SMIM5Q71RC9 77 aa29.58■■■□□ 2.33
YIF1A-202ENST00000376899 MTFR1LQ9H019 292 aa29.58■■■□□ 2.33
YIF1A-202ENST00000376899 IFT57Q9NWB7 429 aa29.58■■■□□ 2.33
YIF1A-202ENST00000376899 SOS1Q07889 1333 aaPredicted RBP29.57■■■□□ 2.32
YIF1A-202ENST00000376899 SENP3-EIF4A1A0A087X0R7 540 aa29.57■■■□□ 2.32
YIF1A-202ENST00000376899 PRAMEF22A3QJZ6 481 aa29.57■■■□□ 2.32
YIF1A-202ENST00000376899 ZBTB7AO95365 584 aa29.57■■■□□ 2.32
YIF1A-202ENST00000376899 ZBTB1Q9Y2K1 713 aa29.57■■■□□ 2.32
YIF1A-202ENST00000376899 USP16Q9Y5T5 823 aa29.57■■■□□ 2.32
YIF1A-202ENST00000376899 GIGYF1O75420 1035 aaPredicted RBP29.56■■■□□ 2.32
YIF1A-202ENST00000376899 SPON1Q9HCB6 807 aa29.55■■■□□ 2.32
YIF1A-202ENST00000376899 LAS1LQ9Y4W2 734 aaKnown RBP29.55■■■□□ 2.32
YIF1A-202ENST00000376899 GNAI1P63096 354 aa29.54■■■□□ 2.32
YIF1A-202ENST00000376899 TRAPPC3LQ5T215 181 aa29.54■■■□□ 2.32
YIF1A-202ENST00000376899 IL16Q14005 1332 aa29.53■■■□□ 2.32
YIF1A-202ENST00000376899 ARHGEF1Q92888 912 aaKnown RBP29.53■■■□□ 2.32
YIF1A-202ENST00000376899 MBIPQ9NS73 344 aa29.53■■■□□ 2.32
YIF1A-202ENST00000376899 MSH5O43196 834 aa29.52■■■□□ 2.32
YIF1A-202ENST00000376899 SGIP1Q9BQI5 828 aa29.51■■■□□ 2.31
YIF1A-202ENST00000376899 COL15A1P39059 1388 aa29.51■■■□□ 2.31
YIF1A-202ENST00000376899 A1BGP04217 495 aa29.5■■■□□ 2.31
YIF1A-202ENST00000376899 PTGER2P43116 358 aa29.5■■■□□ 2.31
YIF1A-202ENST00000376899 WDR63Q8IWG1 891 aa29.5■■■□□ 2.31
YIF1A-202ENST00000376899 ATF5Q9Y2D1 282 aaPredicted RBP29.5■■■□□ 2.31
YIF1A-202ENST00000376899 CANXP27824 592 aaKnown RBP29.49■■■□□ 2.31
YIF1A-202ENST00000376899 EIF5P55010 431 aaKnown RBP29.49■■■□□ 2.31
YIF1A-202ENST00000376899 SALL2Q9Y467 1007 aaPredicted RBP29.49■■■□□ 2.31
YIF1A-202ENST00000376899 IL6STP40189 918 aaPredicted RBP29.48■■■□□ 2.31
YIF1A-202ENST00000376899 ZNF521Q96K83 1311 aa29.47■■■□□ 2.31
YIF1A-202ENST00000376899 USP42Q9H9J4 1324 aaKnown RBP29.46■■■□□ 2.31
YIF1A-202ENST00000376899 RFC4P35249 363 aa29.46■■■□□ 2.31
YIF1A-202ENST00000376899 SCN7AQ01118 1682 aa29.45■■■□□ 2.31
YIF1A-202ENST00000376899 HOXB7P09629 217 aa29.45■■■□□ 2.31
YIF1A-202ENST00000376899 KRT24Q2M2I5 525 aa29.45■■■□□ 2.31
YIF1A-202ENST00000376899 ERBB4Q15303 1308 aa29.45■■■□□ 2.3
YIF1A-202ENST00000376899 NBPF26B4DH59 902 aa29.44■■■□□ 2.3
YIF1A-202ENST00000376899 NBPF10Q6P3W6 841 aaKnown RBP29.44■■■□□ 2.3
YIF1A-202ENST00000376899 NBPF15Q8N660 670 aa29.44■■■□□ 2.3
YIF1A-202ENST00000376899 BCORQ6W2J9 1755 aa29.44■■■□□ 2.3
YIF1A-202ENST00000376899 A0A087WZG4 1122 aa29.42■■■□□ 2.3
YIF1A-202ENST00000376899 GYS1P13807 737 aa29.42■■■□□ 2.3
YIF1A-202ENST00000376899 MSL1Q68DK7 614 aa29.42■■■□□ 2.3
YIF1A-202ENST00000376899 SRP68Q9UHB9 627 aaKnown RBP29.42■■■□□ 2.3
YIF1A-202ENST00000376899 NARFQ9UHQ1 456 aa29.42■■■□□ 2.3
YIF1A-202ENST00000376899 PIP4K2AP48426 406 aaPredicted RBP29.41■■■□□ 2.3
YIF1A-202ENST00000376899 POLD1P28340 1107 aa29.39■■■□□ 2.3
YIF1A-202ENST00000376899 TSR2Q969E8 191 aaKnown RBP29.39■■■□□ 2.3
YIF1A-202ENST00000376899 ZPR1O75312 459 aa29.38■■■□□ 2.29
YIF1A-202ENST00000376899 DUSP27Q5VZP5 1158 aa29.38■■■□□ 2.29
YIF1A-202ENST00000376899 NLGN1Q8N2Q7 840 aa29.38■■■□□ 2.29
YIF1A-202ENST00000376899 USPL1Q5W0Q7 1092 aa29.37■■■□□ 2.29
YIF1A-202ENST00000376899 SPINK5Q9NQ38 1064 aaPredicted RBP29.37■■■□□ 2.29
YIF1A-202ENST00000376899 FANCIQ9NVI1 1328 aa29.37■■■□□ 2.29
YIF1A-202ENST00000376899 EIF2S2P20042 333 aaKnown RBP29.36■■■□□ 2.29
YIF1A-202ENST00000376899 PDIA6Q15084 440 aa29.36■■■□□ 2.29
YIF1A-202ENST00000376899 ZNF330Q9Y3S2 320 aaPredicted RBP29.36■■■□□ 2.29
YIF1A-202ENST00000376899 LRP10Q7Z4F1 713 aa29.35■■■□□ 2.29
YIF1A-202ENST00000376899 NPM2Q86SE8 214 aaKnown RBP29.35■■■□□ 2.29
YIF1A-202ENST00000376899 C8orf58Q8NAV2 365 aa29.35■■■□□ 2.29
YIF1A-202ENST00000376899 ARXQ96QS3 562 aa29.35■■■□□ 2.29
YIF1A-202ENST00000376899 BCL2L12Q9HB09 334 aa29.35■■■□□ 2.29
YIF1A-202ENST00000376899 CAMTA2O94983 1202 aa29.34■■■□□ 2.29
YIF1A-202ENST00000376899 FKBP8Q14318 412 aa29.34■■■□□ 2.29
YIF1A-202ENST00000376899 DZIP3Q86Y13 1208 aaKnown RBP29.34■■■□□ 2.29
YIF1A-202ENST00000376899 PPP1R1BQ9UD71 204 aaPredicted RBP29.34■■■□□ 2.29
YIF1A-202ENST00000376899 HDGFL1Q5TGJ6 251 aa29.33■■■□□ 2.29
YIF1A-202ENST00000376899 TBC1D2BQ9UPU7 963 aa29.33■■■□□ 2.29
YIF1A-202ENST00000376899 MYH16Q9H6N6 1097 aa29.32■■■□□ 2.28
YIF1A-202ENST00000376899 RGL2O15211 777 aa29.31■■■□□ 2.28
YIF1A-202ENST00000376899 TSPYL6Q8N831 410 aa29.31■■■□□ 2.28
YIF1A-202ENST00000376899 DDX21Q9NR30 783 aaKnown RBP eCLIP29.31■■■□□ 2.28
YIF1A-202ENST00000376899 MMP10P09238 476 aa29.3■■■□□ 2.28
YIF1A-202ENST00000376899 MYL6BP14649 208 aa29.3■■■□□ 2.28
YIF1A-202ENST00000376899 GOLGA2Q08379 1002 aa29.3■■■□□ 2.28
YIF1A-202ENST00000376899 PROSER3Q2NL68 480 aa29.3■■■□□ 2.28
YIF1A-202ENST00000376899 NECTIN2Q92692 538 aa29.3■■■□□ 2.28
YIF1A-202ENST00000376899 ELL2O00472 640 aaPredicted RBP29.29■■■□□ 2.28
YIF1A-202ENST00000376899 TM4SF1P30408 202 aa29.29■■■□□ 2.28
YIF1A-202ENST00000376899 CHPF2Q9P2E5 772 aa29.28■■■□□ 2.28
YIF1A-202ENST00000376899 SRCAPQ6ZRS2 3230 aa29.28■■■□□ 2.28
YIF1A-202ENST00000376899 NRXN2Q9P2S2 1712 aa29.28■■■□□ 2.28
YIF1A-202ENST00000376899 DBF4Q9UBU7 674 aaPredicted RBP29.27■■■□□ 2.28
YIF1A-202ENST00000376899 NUP98P52948 1817 aa29.27■■■□□ 2.28
YIF1A-202ENST00000376899 KIF13BQ9NQT8 1826 aa29.27■■■□□ 2.28
YIF1A-202ENST00000376899 E9PSI1 815 aa29.26■■■□□ 2.27
YIF1A-202ENST00000376899 ANXA1P04083 346 aa29.26■■■□□ 2.27
YIF1A-202ENST00000376899 TWISTNBQ3B726 338 aaPredicted RBP29.26■■■□□ 2.27
YIF1A-202ENST00000376899 CLEC4GQ6UXB4 293 aa29.26■■■□□ 2.27
YIF1A-202ENST00000376899 CHMP4AQ9BY43 222 aa29.26■■■□□ 2.27
YIF1A-202ENST00000376899 AFDNP55196 1824 aaKnown RBP29.26■■■□□ 2.27
YIF1A-202ENST00000376899 DDR1Q08345 913 aa29.25■■■□□ 2.27
YIF1A-202ENST00000376899 NFIXQ14938 502 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms