RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 GNPATO15228 680 aa24.12■■□□□ 1.45
CDX4-201ENST00000373514 TFCP2L1Q9NZI6 479 aa24.12■■□□□ 1.45
CDX4-201ENST00000373514 USP16Q9Y5T5 823 aa24.12■■□□□ 1.45
CDX4-201ENST00000373514 PNPLA7Q6ZV29 1317 aa24.12■■□□□ 1.45
CDX4-201ENST00000373514 SNRPA1P09661 255 aaKnown RBP24.11■■□□□ 1.45
CDX4-201ENST00000373514 WDR63Q8IWG1 891 aa24.11■■□□□ 1.45
CDX4-201ENST00000373514 IL16Q14005 1332 aa24.11■■□□□ 1.45
CDX4-201ENST00000373514 GIGYF1O75420 1035 aaPredicted RBP24.1■■□□□ 1.45
CDX4-201ENST00000373514 PHF14O94880 888 aa24.1■■□□□ 1.45
CDX4-201ENST00000373514 NGEFQ8N5V2 710 aa24.1■■□□□ 1.45
CDX4-201ENST00000373514 ZBTB1Q9Y2K1 713 aa24.1■■□□□ 1.45
CDX4-201ENST00000373514 PIP4K2AP48426 406 aaPredicted RBP24.1■■□□□ 1.45
CDX4-201ENST00000373514 HNRNPUQ00839 825 aaKnown RBP eCLIP24.1■■□□□ 1.45
CDX4-201ENST00000373514 INTS5Q6P9B9 1019 aaKnown RBP24.1■■□□□ 1.45
CDX4-201ENST00000373514 CCDC87Q9NVE4 849 aa24.1■■□□□ 1.45
CDX4-201ENST00000373514 FANCIQ9NVI1 1328 aa24.1■■□□□ 1.45
CDX4-201ENST00000373514 BCORQ6W2J9 1755 aa24.09■■□□□ 1.45
CDX4-201ENST00000373514 SCN7AQ01118 1682 aa24.08■■□□□ 1.45
CDX4-201ENST00000373514 COL24A1Q17RW2 1714 aa24.06■■□□□ 1.44
CDX4-201ENST00000373514 A1BGP04217 495 aa24.06■■□□□ 1.44
CDX4-201ENST00000373514 RC3H1Q5TC82 1133 aaKnown RBP24.06■■□□□ 1.44
CDX4-201ENST00000373514 STARD3NLO95772 234 aa24.05■■□□□ 1.44
CDX4-201ENST00000373514 CANXP27824 592 aaKnown RBP24.05■■□□□ 1.44
CDX4-201ENST00000373514 TEX13AQ9BXU3 409 aaPredicted RBP24.05■■□□□ 1.44
CDX4-201ENST00000373514 SOS1Q07889 1333 aaPredicted RBP24.05■■□□□ 1.44
CDX4-201ENST00000373514 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.05■■□□□ 1.44
CDX4-201ENST00000373514 COL23A1Q86Y22 540 aaPredicted RBP24.05■■□□□ 1.44
CDX4-201ENST00000373514 C8orf58Q8NAV2 365 aa24.05■■□□□ 1.44
CDX4-201ENST00000373514 COL15A1P39059 1388 aa24.04■■□□□ 1.44
CDX4-201ENST00000373514 RPS6KA4O75676 772 aa24.04■■□□□ 1.44
CDX4-201ENST00000373514 NECTIN2Q92692 538 aa24.04■■□□□ 1.44
CDX4-201ENST00000373514 CDCA7LQ96GN5 454 aa24.04■■□□□ 1.44
CDX4-201ENST00000373514 RTCBQ9Y3I0 505 aaKnown RBP24.04■■□□□ 1.44
CDX4-201ENST00000373514 ELL2O00472 640 aaPredicted RBP24.03■■□□□ 1.44
CDX4-201ENST00000373514 DUSP27Q5VZP5 1158 aa24.03■■□□□ 1.44
CDX4-201ENST00000373514 TSPYL6Q8N831 410 aa24.03■■□□□ 1.44
CDX4-201ENST00000373514 MSH5O43196 834 aa24.02■■□□□ 1.44
CDX4-201ENST00000373514 EIF2S2P20042 333 aaKnown RBP24.02■■□□□ 1.44
CDX4-201ENST00000373514 SSFA2P28290 1259 aa24.02■■□□□ 1.44
CDX4-201ENST00000373514 GOLGA2Q08379 1002 aa24.02■■□□□ 1.44
CDX4-201ENST00000373514 NBPF26B4DH59 902 aa24.01■■□□□ 1.43
CDX4-201ENST00000373514 HMGB2P26583 209 aaKnown RBP24.01■■□□□ 1.43
CDX4-201ENST00000373514 NBPF10Q6P3W6 841 aaKnown RBP24.01■■□□□ 1.43
CDX4-201ENST00000373514 NBPF15Q8N660 670 aa24.01■■□□□ 1.43
CDX4-201ENST00000373514 ZNF330Q9Y3S2 320 aaPredicted RBP24.01■■□□□ 1.43
CDX4-201ENST00000373514 ZBTB7AO95365 584 aa23.99■■□□□ 1.43
CDX4-201ENST00000373514 EXOSC9Q06265 439 aaKnown RBP23.99■■□□□ 1.43
CDX4-201ENST00000373514 ARHGEF1Q92888 912 aaKnown RBP23.99■■□□□ 1.43
CDX4-201ENST00000373514 MYH16Q9H6N6 1097 aa23.99■■□□□ 1.43
CDX4-201ENST00000373514 LRP5O75197 1615 aa23.98■■□□□ 1.43
CDX4-201ENST00000373514 ANXA1P04083 346 aa23.98■■□□□ 1.43
CDX4-201ENST00000373514 SLFN5Q08AF3 891 aa23.98■■□□□ 1.43
CDX4-201ENST00000373514 NUP98P52948 1817 aa23.97■■□□□ 1.43
CDX4-201ENST00000373514 HOXB7P09629 217 aa23.97■■□□□ 1.43
CDX4-201ENST00000373514 EIF5P55010 431 aaKnown RBP23.97■■□□□ 1.43
CDX4-201ENST00000373514 PROSER3Q2NL68 480 aa23.97■■□□□ 1.43
CDX4-201ENST00000373514 TRAPPC3LQ5T215 181 aa23.97■■□□□ 1.43
CDX4-201ENST00000373514 HDGFL1Q5TGJ6 251 aa23.97■■□□□ 1.43
CDX4-201ENST00000373514 SRP68Q9UHB9 627 aaKnown RBP23.97■■□□□ 1.43
CDX4-201ENST00000373514 E9PSI1 815 aa23.96■■□□□ 1.43
CDX4-201ENST00000373514 MYL6BP14649 208 aa23.96■■□□□ 1.43
CDX4-201ENST00000373514 ZBED9Q6R2W3 1325 aa23.96■■□□□ 1.43
CDX4-201ENST00000373514 ADRA2BP18089 450 aa23.95■■□□□ 1.43
CDX4-201ENST00000373514 IL6STP40189 918 aaPredicted RBP23.95■■□□□ 1.43
CDX4-201ENST00000373514 TWISTNBQ3B726 338 aaPredicted RBP23.95■■□□□ 1.43
CDX4-201ENST00000373514 MSL1Q68DK7 614 aa23.95■■□□□ 1.43
CDX4-201ENST00000373514 FLAD1Q8NFF5 587 aa23.95■■□□□ 1.43
CDX4-201ENST00000373514 PDIA6Q15084 440 aa23.94■■□□□ 1.42
CDX4-201ENST00000373514 CHPF2Q9P2E5 772 aa23.94■■□□□ 1.42
CDX4-201ENST00000373514 ARFGEF2Q9Y6D5 1785 aa23.94■■□□□ 1.42
CDX4-201ENST00000373514 CACNA1FO60840 1977 aa23.94■■□□□ 1.42
CDX4-201ENST00000373514 ANKRD36CQ5JPF3 1778 aa23.94■■□□□ 1.42
CDX4-201ENST00000373514 RFC4P35249 363 aa23.94■■□□□ 1.42
CDX4-201ENST00000373514 USP42Q9H9J4 1324 aaKnown RBP23.93■■□□□ 1.42
CDX4-201ENST00000373514 ATF5Q9Y2D1 282 aaPredicted RBP23.93■■□□□ 1.42
CDX4-201ENST00000373514 ERBB4Q15303 1308 aa23.93■■□□□ 1.42
CDX4-201ENST00000373514 TCERG1O14776 1098 aaKnown RBP23.92■■□□□ 1.42
CDX4-201ENST00000373514 LRP10Q7Z4F1 713 aa23.92■■□□□ 1.42
CDX4-201ENST00000373514 TBC1D2BQ9UPU7 963 aa23.92■■□□□ 1.42
CDX4-201ENST00000373514 AFDNP55196 1824 aaKnown RBP23.91■■□□□ 1.42
CDX4-201ENST00000373514 USPL1Q5W0Q7 1092 aa23.91■■□□□ 1.42
CDX4-201ENST00000373514 TRMT2AQ8IZ69 625 aaKnown RBP23.91■■□□□ 1.42
CDX4-201ENST00000373514 ARXQ96QS3 562 aa23.9■■□□□ 1.42
CDX4-201ENST00000373514 MTFR1LQ9H019 292 aa23.9■■□□□ 1.42
CDX4-201ENST00000373514 GYS1P13807 737 aa23.89■■□□□ 1.42
CDX4-201ENST00000373514 DZIP3Q86Y13 1208 aaKnown RBP23.89■■□□□ 1.42
CDX4-201ENST00000373514 NARFQ9UHQ1 456 aa23.89■■□□□ 1.42
CDX4-201ENST00000373514 VAMP4O75379 141 aa23.89■■□□□ 1.41
CDX4-201ENST00000373514 SLC16A10Q8TF71 515 aa23.89■■□□□ 1.41
CDX4-201ENST00000373514 BCL2L12Q9HB09 334 aa23.89■■□□□ 1.41
CDX4-201ENST00000373514 DDX21Q9NR30 783 aaKnown RBP eCLIP23.89■■□□□ 1.41
CDX4-201ENST00000373514 TTLL7Q6ZT98 887 aa23.88■■□□□ 1.41
CDX4-201ENST00000373514 A0A087WZG4 1122 aa23.87■■□□□ 1.41
CDX4-201ENST00000373514 DBF4Q9UBU7 674 aaPredicted RBP23.87■■□□□ 1.41
CDX4-201ENST00000373514 ZPR1O75312 459 aa23.86■■□□□ 1.41
CDX4-201ENST00000373514 CAMTA2O94983 1202 aa23.86■■□□□ 1.41
CDX4-201ENST00000373514 PTGER2P43116 358 aa23.86■■□□□ 1.41
CDX4-201ENST00000373514 FKBP8Q14318 412 aa23.86■■□□□ 1.41
CDX4-201ENST00000373514 NPM2Q86SE8 214 aaKnown RBP23.86■■□□□ 1.41
CDX4-201ENST00000373514 SGIP1Q9BQI5 828 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms