RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 MBIPQ9NS73 344 aa23.83■■□□□ 1.41
PBX3-202ENST00000373482 CCDC87Q9NVE4 849 aa23.82■■□□□ 1.4
PBX3-202ENST00000373482 RTCBQ9Y3I0 505 aaKnown RBP23.82■■□□□ 1.4
PBX3-202ENST00000373482 CACNA1FO60840 1977 aa23.82■■□□□ 1.4
PBX3-202ENST00000373482 GIGYF1O75420 1035 aaPredicted RBP23.81■■□□□ 1.4
PBX3-202ENST00000373482 SSFA2P28290 1259 aa23.81■■□□□ 1.4
PBX3-202ENST00000373482 PNPLA7Q6ZV29 1317 aa23.81■■□□□ 1.4
PBX3-202ENST00000373482 RPS6KA4O75676 772 aa23.8■■□□□ 1.4
PBX3-202ENST00000373482 USP16Q9Y5T5 823 aa23.8■■□□□ 1.4
PBX3-202ENST00000373482 PRAMEF22A3QJZ6 481 aa23.79■■□□□ 1.4
PBX3-202ENST00000373482 MSH5O43196 834 aa23.79■■□□□ 1.4
PBX3-202ENST00000373482 PHF14O94880 888 aa23.79■■□□□ 1.4
PBX3-202ENST00000373482 INTS5Q6P9B9 1019 aaKnown RBP23.78■■□□□ 1.4
PBX3-202ENST00000373482 COL24A1Q17RW2 1714 aa23.78■■□□□ 1.4
PBX3-202ENST00000373482 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.77■■□□□ 1.4
PBX3-202ENST00000373482 ADRA2BP18089 450 aa23.77■■□□□ 1.4
PBX3-202ENST00000373482 TRAPPC3LQ5T215 181 aa23.77■■□□□ 1.4
PBX3-202ENST00000373482 CANXP27824 592 aaKnown RBP23.76■■□□□ 1.39
PBX3-202ENST00000373482 COL23A1Q86Y22 540 aaPredicted RBP23.76■■□□□ 1.39
PBX3-202ENST00000373482 ZBTB1Q9Y2K1 713 aa23.76■■□□□ 1.39
PBX3-202ENST00000373482 ZNF521Q96K83 1311 aa23.76■■□□□ 1.39
PBX3-202ENST00000373482 NPM2Q86SE8 214 aaKnown RBP23.75■■□□□ 1.39
PBX3-202ENST00000373482 SLC16A10Q8TF71 515 aa23.75■■□□□ 1.39
PBX3-202ENST00000373482 TSR2Q969E8 191 aaKnown RBP23.75■■□□□ 1.39
PBX3-202ENST00000373482 BCORQ6W2J9 1755 aa23.74■■□□□ 1.39
PBX3-202ENST00000373482 A1BGP04217 495 aa23.74■■□□□ 1.39
PBX3-202ENST00000373482 HOXB7P09629 217 aa23.74■■□□□ 1.39
PBX3-202ENST00000373482 GOLGA2Q08379 1002 aa23.74■■□□□ 1.39
PBX3-202ENST00000373482 PDGFDQ9GZP0 370 aaPredicted RBP23.74■■□□□ 1.39
PBX3-202ENST00000373482 MYH16Q9H6N6 1097 aa23.74■■□□□ 1.39
PBX3-202ENST00000373482 HNRNPUQ00839 825 aaKnown RBP eCLIP23.73■■□□□ 1.39
PBX3-202ENST00000373482 KRT24Q2M2I5 525 aa23.73■■□□□ 1.39
PBX3-202ENST00000373482 AMIGO3Q86WK7 504 aa23.73■■□□□ 1.39
PBX3-202ENST00000373482 SOS1Q07889 1333 aaPredicted RBP23.73■■□□□ 1.39
PBX3-202ENST00000373482 COL15A1P39059 1388 aa23.73■■□□□ 1.39
PBX3-202ENST00000373482 EIF2S2P20042 333 aaKnown RBP23.72■■□□□ 1.39
PBX3-202ENST00000373482 RFC4P35249 363 aa23.72■■□□□ 1.39
PBX3-202ENST00000373482 IL6STP40189 918 aaPredicted RBP23.72■■□□□ 1.39
PBX3-202ENST00000373482 SMIM5Q71RC9 77 aa23.72■■□□□ 1.39
PBX3-202ENST00000373482 ARHGEF1Q92888 912 aaKnown RBP23.72■■□□□ 1.39
PBX3-202ENST00000373482 LRP5O75197 1615 aa23.72■■□□□ 1.39
PBX3-202ENST00000373482 NUP98P52948 1817 aa23.71■■□□□ 1.39
PBX3-202ENST00000373482 SCN7AQ01118 1682 aa23.71■■□□□ 1.39
PBX3-202ENST00000373482 ERBB4Q15303 1308 aa23.71■■□□□ 1.39
PBX3-202ENST00000373482 FANCIQ9NVI1 1328 aa23.71■■□□□ 1.39
PBX3-202ENST00000373482 DUSP27Q5VZP5 1158 aa23.71■■□□□ 1.39
PBX3-202ENST00000373482 ZNF330Q9Y3S2 320 aaPredicted RBP23.71■■□□□ 1.39
PBX3-202ENST00000373482 A0A087WZG4 1122 aa23.7■■□□□ 1.38
PBX3-202ENST00000373482 EIF5P55010 431 aaKnown RBP23.7■■□□□ 1.38
PBX3-202ENST00000373482 CHMP4AQ9BY43 222 aa23.7■■□□□ 1.38
PBX3-202ENST00000373482 MTFR1LQ9H019 292 aa23.7■■□□□ 1.38
PBX3-202ENST00000373482 ZBTB7AO95365 584 aa23.69■■□□□ 1.38
PBX3-202ENST00000373482 E9PSI1 815 aa23.68■■□□□ 1.38
PBX3-202ENST00000373482 ELL2O00472 640 aaPredicted RBP23.68■■□□□ 1.38
PBX3-202ENST00000373482 PIP4K2AP48426 406 aaPredicted RBP23.68■■□□□ 1.38
PBX3-202ENST00000373482 SPON1Q9HCB6 807 aa23.68■■□□□ 1.38
PBX3-202ENST00000373482 SPINK5Q9NQ38 1064 aaPredicted RBP23.68■■□□□ 1.38
PBX3-202ENST00000373482 ZPR1O75312 459 aa23.67■■□□□ 1.38
PBX3-202ENST00000373482 HDGFL1Q5TGJ6 251 aa23.67■■□□□ 1.38
PBX3-202ENST00000373482 C8orf58Q8NAV2 365 aa23.67■■□□□ 1.38
PBX3-202ENST00000373482 NECTIN2Q92692 538 aa23.66■■□□□ 1.38
PBX3-202ENST00000373482 ARXQ96QS3 562 aa23.66■■□□□ 1.38
PBX3-202ENST00000373482 ATF5Q9Y2D1 282 aaPredicted RBP23.66■■□□□ 1.38
PBX3-202ENST00000373482 NBPF26B4DH59 902 aa23.65■■□□□ 1.38
PBX3-202ENST00000373482 MYL6BP14649 208 aa23.65■■□□□ 1.38
PBX3-202ENST00000373482 TWISTNBQ3B726 338 aaPredicted RBP23.65■■□□□ 1.38
PBX3-202ENST00000373482 NBPF10Q6P3W6 841 aaKnown RBP23.65■■□□□ 1.38
PBX3-202ENST00000373482 NBPF15Q8N660 670 aa23.65■■□□□ 1.38
PBX3-202ENST00000373482 NARFQ9UHQ1 456 aa23.65■■□□□ 1.38
PBX3-202ENST00000373482 USP42Q9H9J4 1324 aaKnown RBP23.64■■□□□ 1.38
PBX3-202ENST00000373482 SLFN5Q08AF3 891 aa23.64■■□□□ 1.37
PBX3-202ENST00000373482 TSPYL6Q8N831 410 aa23.64■■□□□ 1.37
PBX3-202ENST00000373482 EXOSC9Q06265 439 aaKnown RBP23.63■■□□□ 1.37
PBX3-202ENST00000373482 DBF4Q9UBU7 674 aaPredicted RBP23.63■■□□□ 1.37
PBX3-202ENST00000373482 ANKRD36CQ5JPF3 1778 aa23.63■■□□□ 1.37
PBX3-202ENST00000373482 AFDNP55196 1824 aaKnown RBP23.62■■□□□ 1.37
PBX3-202ENST00000373482 POLD1P28340 1107 aa23.62■■□□□ 1.37
PBX3-202ENST00000373482 CCDC30Q5VVM6 783 aa23.62■■□□□ 1.37
PBX3-202ENST00000373482 MSL1Q68DK7 614 aa23.62■■□□□ 1.37
PBX3-202ENST00000373482 DZIP3Q86Y13 1208 aaKnown RBP23.62■■□□□ 1.37
PBX3-202ENST00000373482 DDX21Q9NR30 783 aaKnown RBP eCLIP23.62■■□□□ 1.37
PBX3-202ENST00000373482 SRP68Q9UHB9 627 aaKnown RBP23.62■■□□□ 1.37
PBX3-202ENST00000373482 GYS1P13807 737 aa23.61■■□□□ 1.37
PBX3-202ENST00000373482 USPL1Q5W0Q7 1092 aa23.61■■□□□ 1.37
PBX3-202ENST00000373482 NLGN1Q8N2Q7 840 aa23.61■■□□□ 1.37
PBX3-202ENST00000373482 CDCA7LQ96GN5 454 aa23.61■■□□□ 1.37
PBX3-202ENST00000373482 CHPF2Q9P2E5 772 aa23.61■■□□□ 1.37
PBX3-202ENST00000373482 TBC1D2BQ9UPU7 963 aa23.61■■□□□ 1.37
PBX3-202ENST00000373482 ZBED9Q6R2W3 1325 aa23.6■■□□□ 1.37
PBX3-202ENST00000373482 PDIA6Q15084 440 aa23.6■■□□□ 1.37
PBX3-202ENST00000373482 ARFGEF2Q9Y6D5 1785 aa23.6■■□□□ 1.37
PBX3-202ENST00000373482 STK31Q9BXU1 1019 aa23.59■■□□□ 1.37
PBX3-202ENST00000373482 ANXA1P04083 346 aa23.58■■□□□ 1.37
PBX3-202ENST00000373482 KIF6Q6ZMV9 814 aa23.58■■□□□ 1.37
PBX3-202ENST00000373482 HYPKQ9NX55 129 aa23.58■■□□□ 1.37
PBX3-202ENST00000373482 VAMP4O75379 141 aa23.57■■□□□ 1.36
PBX3-202ENST00000373482 PROSER3Q2NL68 480 aa23.57■■□□□ 1.36
PBX3-202ENST00000373482 TRMT2AQ8IZ69 625 aaKnown RBP23.57■■□□□ 1.36
PBX3-202ENST00000373482 ZNF652Q9Y2D9 606 aa23.57■■□□□ 1.36
PBX3-202ENST00000373482 CAMTA2O94983 1202 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms