RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 GIGYF1O75420 1035 aaPredicted RBP24.37■■□□□ 1.49
LMNA-204ENST00000368298 GNAI1P63096 354 aa24.37■■□□□ 1.49
LMNA-204ENST00000368298 AMIGO3Q86WK7 504 aa24.37■■□□□ 1.49
LMNA-204ENST00000368298 WDR63Q8IWG1 891 aa24.37■■□□□ 1.49
LMNA-204ENST00000368298 GNPATO15228 680 aa24.36■■□□□ 1.49
LMNA-204ENST00000368298 PDGFDQ9GZP0 370 aaPredicted RBP24.36■■□□□ 1.49
LMNA-204ENST00000368298 CCDC87Q9NVE4 849 aa24.36■■□□□ 1.49
LMNA-204ENST00000368298 SENP3-EIF4A1A0A087X0R7 540 aa24.35■■□□□ 1.49
LMNA-204ENST00000368298 RTCBQ9Y3I0 505 aaKnown RBP24.35■■□□□ 1.49
LMNA-204ENST00000368298 USP16Q9Y5T5 823 aa24.35■■□□□ 1.49
LMNA-204ENST00000368298 ADRA2BP18089 450 aa24.34■■□□□ 1.49
LMNA-204ENST00000368298 COL23A1Q86Y22 540 aaPredicted RBP24.34■■□□□ 1.49
LMNA-204ENST00000368298 SLC16A10Q8TF71 515 aa24.34■■□□□ 1.49
LMNA-204ENST00000368298 LAS1LQ9Y4W2 734 aaKnown RBP24.34■■□□□ 1.49
LMNA-204ENST00000368298 PRAMEF22A3QJZ6 481 aa24.33■■□□□ 1.49
LMNA-204ENST00000368298 MBIPQ9NS73 344 aa24.33■■□□□ 1.49
LMNA-204ENST00000368298 ZNF521Q96K83 1311 aa24.33■■□□□ 1.49
LMNA-204ENST00000368298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.32■■□□□ 1.48
LMNA-204ENST00000368298 LAMB4A4D0S4 1761 aa24.32■■□□□ 1.48
LMNA-204ENST00000368298 ZBTB1Q9Y2K1 713 aa24.31■■□□□ 1.48
LMNA-204ENST00000368298 SALL2Q9Y467 1007 aaPredicted RBP24.31■■□□□ 1.48
LMNA-204ENST00000368298 TRAPPC3LQ5T215 181 aa24.3■■□□□ 1.48
LMNA-204ENST00000368298 SOS1Q07889 1333 aaPredicted RBP24.3■■□□□ 1.48
LMNA-204ENST00000368298 SMIM5Q71RC9 77 aa24.29■■□□□ 1.48
LMNA-204ENST00000368298 MTFR1LQ9H019 292 aa24.29■■□□□ 1.48
LMNA-204ENST00000368298 COL24A1Q17RW2 1714 aa24.28■■□□□ 1.48
LMNA-204ENST00000368298 PHF14O94880 888 aa24.28■■□□□ 1.48
LMNA-204ENST00000368298 HOXB7P09629 217 aa24.28■■□□□ 1.48
LMNA-204ENST00000368298 EIF5P55010 431 aaKnown RBP24.28■■□□□ 1.48
LMNA-204ENST00000368298 ARHGEF1Q92888 912 aaKnown RBP24.28■■□□□ 1.48
LMNA-204ENST00000368298 A1BGP04217 495 aa24.27■■□□□ 1.48
LMNA-204ENST00000368298 IL6STP40189 918 aaPredicted RBP24.26■■□□□ 1.47
LMNA-204ENST00000368298 C4AP0C0L4 1744 aa24.26■■□□□ 1.47
LMNA-204ENST00000368298 CANXP27824 592 aaKnown RBP24.25■■□□□ 1.47
LMNA-204ENST00000368298 ERBB4Q15303 1308 aa24.25■■□□□ 1.47
LMNA-204ENST00000368298 KRT24Q2M2I5 525 aa24.25■■□□□ 1.47
LMNA-204ENST00000368298 SPON1Q9HCB6 807 aa24.25■■□□□ 1.47
LMNA-204ENST00000368298 COL15A1P39059 1388 aa24.24■■□□□ 1.47
LMNA-204ENST00000368298 MSH5O43196 834 aa24.24■■□□□ 1.47
LMNA-204ENST00000368298 ZBTB7AO95365 584 aa24.24■■□□□ 1.47
LMNA-204ENST00000368298 NBPF26B4DH59 902 aa24.23■■□□□ 1.47
LMNA-204ENST00000368298 RFC4P35249 363 aa24.23■■□□□ 1.47
LMNA-204ENST00000368298 NBPF10Q6P3W6 841 aaKnown RBP24.23■■□□□ 1.47
LMNA-204ENST00000368298 NBPF15Q8N660 670 aa24.23■■□□□ 1.47
LMNA-204ENST00000368298 SGIP1Q9BQI5 828 aa24.23■■□□□ 1.47
LMNA-204ENST00000368298 DUSP27Q5VZP5 1158 aa24.22■■□□□ 1.47
LMNA-204ENST00000368298 TSR2Q969E8 191 aaKnown RBP24.22■■□□□ 1.47
LMNA-204ENST00000368298 SPINK5Q9NQ38 1064 aaPredicted RBP24.22■■□□□ 1.47
LMNA-204ENST00000368298 USP42Q9H9J4 1324 aaKnown RBP24.21■■□□□ 1.47
LMNA-204ENST00000368298 A0A087WZG4 1122 aa24.21■■□□□ 1.47
LMNA-204ENST00000368298 PTGER2P43116 358 aa24.21■■□□□ 1.47
LMNA-204ENST00000368298 FANCIQ9NVI1 1328 aa24.21■■□□□ 1.47
LMNA-204ENST00000368298 C8orf58Q8NAV2 365 aa24.2■■□□□ 1.47
LMNA-204ENST00000368298 ATF5Q9Y2D1 282 aaPredicted RBP24.2■■□□□ 1.47
LMNA-204ENST00000368298 GOLGA2Q08379 1002 aa24.19■■□□□ 1.46
LMNA-204ENST00000368298 MYH16Q9H6N6 1097 aa24.19■■□□□ 1.46
LMNA-204ENST00000368298 NARFQ9UHQ1 456 aa24.19■■□□□ 1.46
LMNA-204ENST00000368298 GYS1P13807 737 aa24.19■■□□□ 1.46
LMNA-204ENST00000368298 PDIA6Q15084 440 aa24.19■■□□□ 1.46
LMNA-204ENST00000368298 EIF2S2P20042 333 aaKnown RBP24.18■■□□□ 1.46
LMNA-204ENST00000368298 PIP4K2AP48426 406 aaPredicted RBP24.18■■□□□ 1.46
LMNA-204ENST00000368298 NLGN1Q8N2Q7 840 aa24.18■■□□□ 1.46
LMNA-204ENST00000368298 LRP10Q7Z4F1 713 aa24.17■■□□□ 1.46
LMNA-204ENST00000368298 CHMP4AQ9BY43 222 aa24.17■■□□□ 1.46
LMNA-204ENST00000368298 ZPR1O75312 459 aa24.16■■□□□ 1.46
LMNA-204ENST00000368298 NPM2Q86SE8 214 aaKnown RBP24.16■■□□□ 1.46
LMNA-204ENST00000368298 TSPYL6Q8N831 410 aa24.16■■□□□ 1.46
LMNA-204ENST00000368298 SRP68Q9UHB9 627 aaKnown RBP24.16■■□□□ 1.46
LMNA-204ENST00000368298 E9PSI1 815 aa24.15■■□□□ 1.46
LMNA-204ENST00000368298 RGL2O15211 777 aa24.15■■□□□ 1.46
LMNA-204ENST00000368298 SLFN5Q08AF3 891 aa24.15■■□□□ 1.46
LMNA-204ENST00000368298 HDGFL1Q5TGJ6 251 aa24.15■■□□□ 1.46
LMNA-204ENST00000368298 ELL2O00472 640 aaPredicted RBP24.14■■□□□ 1.46
LMNA-204ENST00000368298 USPL1Q5W0Q7 1092 aa24.14■■□□□ 1.46
LMNA-204ENST00000368298 DDX21Q9NR30 783 aaKnown RBP eCLIP24.14■■□□□ 1.46
LMNA-204ENST00000368298 DZIP3Q86Y13 1208 aaKnown RBP24.13■■□□□ 1.45
LMNA-204ENST00000368298 TRMT2AQ8IZ69 625 aaKnown RBP24.13■■□□□ 1.45
LMNA-204ENST00000368298 BCL2L12Q9HB09 334 aa24.13■■□□□ 1.45
LMNA-204ENST00000368298 DBF4Q9UBU7 674 aaPredicted RBP24.13■■□□□ 1.45
LMNA-204ENST00000368298 TBC1D2BQ9UPU7 963 aa24.13■■□□□ 1.45
LMNA-204ENST00000368298 ZNF330Q9Y3S2 320 aaPredicted RBP24.13■■□□□ 1.45
LMNA-204ENST00000368298 SCN7AQ01118 1682 aa24.13■■□□□ 1.45
LMNA-204ENST00000368298 POLD1P28340 1107 aa24.13■■□□□ 1.45
LMNA-204ENST00000368298 TWISTNBQ3B726 338 aaPredicted RBP24.13■■□□□ 1.45
LMNA-204ENST00000368298 MSL1Q68DK7 614 aa24.13■■□□□ 1.45
LMNA-204ENST00000368298 CAMTA2O94983 1202 aa24.12■■□□□ 1.45
LMNA-204ENST00000368298 HNRNPUQ00839 825 aaKnown RBP eCLIP24.12■■□□□ 1.45
LMNA-204ENST00000368298 EXOSC9Q06265 439 aaKnown RBP24.12■■□□□ 1.45
LMNA-204ENST00000368298 BCORQ6W2J9 1755 aa24.12■■□□□ 1.45
LMNA-204ENST00000368298 MYL6BP14649 208 aa24.11■■□□□ 1.45
LMNA-204ENST00000368298 FKBP8Q14318 412 aa24.11■■□□□ 1.45
LMNA-204ENST00000368298 PROSER3Q2NL68 480 aa24.11■■□□□ 1.45
LMNA-204ENST00000368298 NECTIN2Q92692 538 aa24.11■■□□□ 1.45
LMNA-204ENST00000368298 CHPF2Q9P2E5 772 aa24.11■■□□□ 1.45
LMNA-204ENST00000368298 TM4SF1P30408 202 aa24.1■■□□□ 1.45
LMNA-204ENST00000368298 CCDC30Q5VVM6 783 aa24.1■■□□□ 1.45
LMNA-204ENST00000368298 CLEC4GQ6UXB4 293 aa24.1■■□□□ 1.45
LMNA-204ENST00000368298 CDCA7LQ96GN5 454 aa24.1■■□□□ 1.45
LMNA-204ENST00000368298 VAMP4O75379 141 aa24.09■■□□□ 1.45
LMNA-204ENST00000368298 ARXQ96QS3 562 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms