RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 SERTM1A2A2V5 107 aa6.53□□□□□ -1.36
RNU4-1-201ENST00000363925 CARNS1A5YM72 827 aa6.53□□□□□ -1.36
RNU4-1-201ENST00000363925 DKK1O94907 266 aa6.53□□□□□ -1.36
RNU4-1-201ENST00000363925 PSMA6P60900 246 aaKnown RBP6.53□□□□□ -1.36
RNU4-1-201ENST00000363925 ELOAQ14241 798 aaKnown RBP6.53□□□□□ -1.36
RNU4-1-201ENST00000363925 MTFR1Q15390 333 aa6.53□□□□□ -1.36
RNU4-1-201ENST00000363925 ARSJQ5FYB0 599 aaPredicted RBP6.53□□□□□ -1.36
RNU4-1-201ENST00000363925 SLC16A10Q8TF71 515 aa6.53□□□□□ -1.36
RNU4-1-201ENST00000363925 NEUROD4Q9HD90 331 aa6.53□□□□□ -1.36
RNU4-1-201ENST00000363925 NXF1Q9UBU9 619 aaKnown RBP6.53□□□□□ -1.36
RNU4-1-201ENST00000363925 PPFIA3O75145 1194 aa6.52□□□□□ -1.37
RNU4-1-201ENST00000363925 NOS2P35228 1153 aa6.52□□□□□ -1.37
RNU4-1-201ENST00000363925 L3MBTL2Q969R5 705 aa6.52□□□□□ -1.37
RNU4-1-201ENST00000363925 MKNK1Q9BUB5 465 aa6.52□□□□□ -1.37
RNU4-1-201ENST00000363925 RUBCNLQ9H714 662 aa6.52□□□□□ -1.37
RNU4-1-201ENST00000363925 A0A1B0GTH6 734 aa6.51□□□□□ -1.37
RNU4-1-201ENST00000363925 SLC35F4A4IF30 521 aa6.51□□□□□ -1.37
RNU4-1-201ENST00000363925 MSX1P28360 303 aa6.51□□□□□ -1.37
RNU4-1-201ENST00000363925 EPHA4P54764 986 aa6.51□□□□□ -1.37
RNU4-1-201ENST00000363925 SH3PXD2AQ5TCZ1 1133 aa6.51□□□□□ -1.37
RNU4-1-201ENST00000363925 DYRK1BQ9Y463 629 aa6.51□□□□□ -1.37
RNU4-1-201ENST00000363925 SENP3-EIF4A1A0A087X0R7 540 aa6.5□□□□□ -1.37
RNU4-1-201ENST00000363925 TERTO14746 1132 aaKnown RBP6.5□□□□□ -1.37
RNU4-1-201ENST00000363925 F11P03951 625 aa6.5□□□□□ -1.37
RNU4-1-201ENST00000363925 ITGA6P23229 1130 aa6.5□□□□□ -1.37
RNU4-1-201ENST00000363925 TXLNAP40222 546 aa6.5□□□□□ -1.37
RNU4-1-201ENST00000363925 FOXK2Q01167 660 aa6.5□□□□□ -1.37
RNU4-1-201ENST00000363925 TEAD4Q15561 434 aa6.5□□□□□ -1.37
RNU4-1-201ENST00000363925 SWI5Q1ZZU3 235 aa6.5□□□□□ -1.37
RNU4-1-201ENST00000363925 VWA5B2Q8N398 1253 aa6.5□□□□□ -1.37
RNU4-1-201ENST00000363925 RETREG2Q8NC44 543 aa6.5□□□□□ -1.37
RNU4-1-201ENST00000363925 RHPN1Q8TCX5 695 aa6.5□□□□□ -1.37
RNU4-1-201ENST00000363925 IQSEC3Q9UPP2 1182 aaPredicted RBP6.5□□□□□ -1.37
RNU4-1-201ENST00000363925 H7C1W4 665 aa6.49□□□□□ -1.37
RNU4-1-201ENST00000363925 IGFBP4P22692 258 aa6.49□□□□□ -1.37
RNU4-1-201ENST00000363925 WDR44Q5JSH3 913 aa6.49□□□□□ -1.37
RNU4-1-201ENST00000363925 EFHC2Q5JST6 749 aa6.49□□□□□ -1.37
RNU4-1-201ENST00000363925 SV2AQ7L0J3 742 aa6.49□□□□□ -1.37
RNU4-1-201ENST00000363925 ZDHHC1Q8WTX9 485 aa6.49□□□□□ -1.37
RNU4-1-201ENST00000363925 ZNF775Q96BV0 537 aaPredicted RBP6.49□□□□□ -1.37
RNU4-1-201ENST00000363925 PHACTR1Q9C0D0 580 aa6.49□□□□□ -1.37
RNU4-1-201ENST00000363925 NUCKS1Q9H1E3 243 aaKnown RBP6.49□□□□□ -1.37
RNU4-1-201ENST00000363925 ATP2B4P23634 1241 aa6.48□□□□□ -1.37
RNU4-1-201ENST00000363925 FOXR1Q6PIV2 292 aa6.48□□□□□ -1.37
RNU4-1-201ENST00000363925 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.48□□□□□ -1.374e-6■■□□□ 13.2
RNU4-1-201ENST00000363925 EML1O00423 815 aa6.47□□□□□ -1.37
RNU4-1-201ENST00000363925 FOXO3O43524 673 aa6.47□□□□□ -1.37
RNU4-1-201ENST00000363925 C21orf2O43822 256 aa6.47□□□□□ -1.37
RNU4-1-201ENST00000363925 PDE4CQ08493 712 aa6.47□□□□□ -1.37
RNU4-1-201ENST00000363925 ALDH16A1Q8IZ83 802 aa6.47□□□□□ -1.37
RNU4-1-201ENST00000363925 GTPBP3Q969Y2 492 aaKnown RBP6.47□□□□□ -1.37
RNU4-1-201ENST00000363925 ZDHHC3Q9NYG2 299 aa6.47□□□□□ -1.37
RNU4-1-201ENST00000363925 A0A1W2PNR3 127 aa6.46□□□□□ -1.38
RNU4-1-201ENST00000363925 H3BM21 787 aa6.46□□□□□ -1.38
RNU4-1-201ENST00000363925 GPR25O00155 361 aa6.46□□□□□ -1.38
RNU4-1-201ENST00000363925 WFS1O76024 890 aa6.46□□□□□ -1.38
RNU4-1-201ENST00000363925 WEE1P30291 646 aa6.46□□□□□ -1.38
RNU4-1-201ENST00000363925 FKBP5Q13451 457 aaPredicted RBP6.46□□□□□ -1.38
RNU4-1-201ENST00000363925 NAA30Q147X3 362 aaPredicted RBP6.46□□□□□ -1.38
RNU4-1-201ENST00000363925 LRRC69Q6ZNQ3 347 aa6.46□□□□□ -1.38
RNU4-1-201ENST00000363925 IRF7Q92985 503 aa6.46□□□□□ -1.38
RNU4-1-201ENST00000363925 CLP1Q92989 425 aaKnown RBP6.46□□□□□ -1.38
RNU4-1-201ENST00000363925 TRERF1Q96PN7 1200 aa6.46□□□□□ -1.38
RNU4-1-201ENST00000363925 C2orf49Q9BVC5 232 aaPredicted RBP6.46□□□□□ -1.38
RNU4-1-201ENST00000363925 CUEDC1Q9NWM3 386 aaPredicted RBP6.46□□□□□ -1.38
RNU4-1-201ENST00000363925 CXXC1Q9P0U4 656 aaPredicted RBP6.46□□□□□ -1.38
RNU4-1-201ENST00000363925 USTQ9Y2C2 406 aa6.46□□□□□ -1.38
RNU4-1-201ENST00000363925 TMEM88BA6NKF7 163 aa6.45□□□□□ -1.38
RNU4-1-201ENST00000363925 FAM69CQ0P6D2 419 aa6.45□□□□□ -1.38
RNU4-1-201ENST00000363925 DBN1Q16643 649 aa6.45□□□□□ -1.38
RNU4-1-201ENST00000363925 TRIM22Q8IYM9 498 aa6.45□□□□□ -1.38
RNU4-1-201ENST00000363925 C1orf216Q8TAB5 229 aa6.45□□□□□ -1.38
RNU4-1-201ENST00000363925 ZNF837Q96EG3 531 aaPredicted RBP6.45□□□□□ -1.38
RNU4-1-201ENST00000363925 KHNYNO15037 678 aaKnown RBP6.44□□□□□ -1.38
RNU4-1-201ENST00000363925 ATP4AP20648 1035 aa6.44□□□□□ -1.38
RNU4-1-201ENST00000363925 B4GALNT3Q6L9W6 998 aa6.44□□□□□ -1.38
RNU4-1-201ENST00000363925 HSH2DQ96JZ2 352 aa6.44□□□□□ -1.38
RNU4-1-201ENST00000363925 ZIC5Q96T25 663 aa6.44□□□□□ -1.38
RNU4-1-201ENST00000363925 DGKZQ13574 1117 aa6.43□□□□□ -1.38
RNU4-1-201ENST00000363925 NPAS3Q8IXF0 933 aa6.43□□□□□ -1.38
RNU4-1-201ENST00000363925 DCDC2BA2VCK2 349 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 ATXN7O15265 892 aaPredicted RBP6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 ABL1P00519 1130 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 SCNN1AP37088 669 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 OCLNQ16625 522 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 C1orf53Q5VUE5 145 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 FIGNL1Q6PIW4 674 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 ZNF295-AS1Q8N0V1 137 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 STAG2Q8N3U4 1231 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 CEP63Q96MT8 703 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 CRISPLD1Q9H336 500 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 KLK14Q9P0G3 267 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 SLAIN2Q9P270 581 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 ANKIB1Q9P2G1 1089 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 PHF24Q9UPV7 400 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 MTMR7Q9Y216 660 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 ERBB4Q15303 1308 aa6.42□□□□□ -1.38
RNU4-1-201ENST00000363925 PTCD1O75127 700 aaKnown RBP6.41□□□□□ -1.38
RNU4-1-201ENST00000363925 NFX1Q12986 1120 aaKnown RBP6.41□□□□□ -1.38
RNU4-1-201ENST00000363925 HIF1AQ16665 826 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms