RNA–Protein interactions for RNA: ENST00000350773.8

TSC2-202, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-202ENST00000350773 USP8P40818 1118 aa18.69■□□□□ 0.58
TSC2-202ENST00000350773 LRSAM1Q6UWE0 723 aa18.69■□□□□ 0.58
TSC2-202ENST00000350773 MYD88Q99836 296 aa18.69■□□□□ 0.58
TSC2-202ENST00000350773 ECHDC1Q9NTX5 307 aa18.69■□□□□ 0.58
TSC2-202ENST00000350773 STX1AQ16623 288 aa18.68■□□□□ 0.58
TSC2-202ENST00000350773 C8orf34Q49A92 452 aa18.68■□□□□ 0.58
TSC2-202ENST00000350773 METTL24Q5JXM2 366 aa18.68■□□□□ 0.58
TSC2-202ENST00000350773 CCDC196A0A1B0GTZ2 297 aa18.68■□□□□ 0.58
TSC2-202ENST00000350773 GOLGA6L7A0A1B0GV03 622 aa18.68■□□□□ 0.58
TSC2-202ENST00000350773 CCDC8Q9H0W5 538 aaPredicted RBP18.68■□□□□ 0.58
TSC2-202ENST00000350773 WASLO00401 505 aaPredicted RBP18.68■□□□□ 0.58
TSC2-202ENST00000350773 C14orf93Q9H972 538 aaKnown RBP18.68■□□□□ 0.58
TSC2-202ENST00000350773 GDPD2Q9HCC8 539 aa18.68■□□□□ 0.58
TSC2-202ENST00000350773 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.68■□□□□ 0.582e-6■■■■■ 103.5
TSC2-202ENST00000350773 CAVIN2O95810 425 aa18.67■□□□□ 0.58
TSC2-202ENST00000350773 PHAXQ9H814 394 aaKnown RBP18.67■□□□□ 0.58
TSC2-202ENST00000350773 HYPKQ9NX55 129 aa18.67■□□□□ 0.58
TSC2-202ENST00000350773 RBM27Q9P2N5 1060 aaKnown RBP18.67■□□□□ 0.58
TSC2-202ENST00000350773 URI1O94763 535 aaPredicted RBP18.67■□□□□ 0.58
TSC2-202ENST00000350773 ATP2B2Q01814 1243 aa18.67■□□□□ 0.58
TSC2-202ENST00000350773 ANKLE2Q86XL3 938 aa18.67■□□□□ 0.58
TSC2-202ENST00000350773 SNX21Q969T3 373 aa18.67■□□□□ 0.58
TSC2-202ENST00000350773 DBF4Q9UBU7 674 aaPredicted RBP18.67■□□□□ 0.58
TSC2-202ENST00000350773 DYNC1I1O14576 645 aa18.67■□□□□ 0.58
TSC2-202ENST00000350773 IGHMBP2P38935 993 aaKnown RBP18.67■□□□□ 0.58
TSC2-202ENST00000350773 TAF4BQ92750 862 aa18.67■□□□□ 0.58
TSC2-202ENST00000350773 PRIMPOLQ96LW4 560 aa18.66■□□□□ 0.58
TSC2-202ENST00000350773 NUP160Q12769 1436 aa18.66■□□□□ 0.58
TSC2-202ENST00000350773 FSIP1Q8NA03 581 aa18.66■□□□□ 0.58
TSC2-202ENST00000350773 PCDHB15Q9Y5E8 787 aa18.66■□□□□ 0.58
TSC2-202ENST00000350773 UGGT2Q9NYU1 1516 aa18.66■□□□□ 0.58
TSC2-202ENST00000350773 CALRP27797 417 aaKnown RBP18.66■□□□□ 0.58
TSC2-202ENST00000350773 CRACR2AQ9BSW2 395 aa18.66■□□□□ 0.58
TSC2-202ENST00000350773 CENPHQ9H3R5 247 aa18.66■□□□□ 0.58
TSC2-202ENST00000350773 MCM3P25205 808 aa18.66■□□□□ 0.58
TSC2-202ENST00000350773 MAP9Q49MG5 647 aa18.66■□□□□ 0.58
TSC2-202ENST00000350773 C16orf45Q96MC5 204 aaPredicted RBP18.66■□□□□ 0.58
TSC2-202ENST00000350773 CLCN1P35523 988 aa18.66■□□□□ 0.58
TSC2-202ENST00000350773 TMX3Q96JJ7 454 aa18.65■□□□□ 0.58
TSC2-202ENST00000350773 SPINK5Q9NQ38 1064 aaPredicted RBP18.65■□□□□ 0.58
TSC2-202ENST00000350773 PIK3R4Q99570 1358 aa18.64■□□□□ 0.58
TSC2-202ENST00000350773 HMG20BQ9P0W2 317 aa18.64■□□□□ 0.58
TSC2-202ENST00000350773 GUCY1B3Q02153 619 aa18.64■□□□□ 0.57
TSC2-202ENST00000350773 SPA17Q15506 151 aa18.64■□□□□ 0.57
TSC2-202ENST00000350773 POGZQ7Z3K3 1410 aa18.64■□□□□ 0.57
TSC2-202ENST00000350773 STARD3NLO95772 234 aa18.64■□□□□ 0.57
TSC2-202ENST00000350773 SSBP05455 408 aaKnown RBP eCLIP18.64■□□□□ 0.57
TSC2-202ENST00000350773 PRDM11Q9NQV5 511 aa18.64■□□□□ 0.57
TSC2-202ENST00000350773 PTPRKQ15262 1439 aa18.63■□□□□ 0.57
TSC2-202ENST00000350773 CCDC85AQ96PX6 553 aaPredicted RBP18.63■□□□□ 0.57
TSC2-202ENST00000350773 ZNF213O14771 459 aa18.63■□□□□ 0.57
TSC2-202ENST00000350773 KIF4BQ2VIQ3 1234 aa18.63■□□□□ 0.57
TSC2-202ENST00000350773 NAPBQ9H115 298 aa18.63■□□□□ 0.57
TSC2-202ENST00000350773 XRCC6P12956 609 aaKnown RBP eCLIP18.63■□□□□ 0.57
TSC2-202ENST00000350773 PRDM10Q9NQV6 1147 aa18.63■□□□□ 0.57
TSC2-202ENST00000350773 ZSCAN22P10073 491 aaPredicted RBP18.63■□□□□ 0.57
TSC2-202ENST00000350773 SDSP20132 328 aa18.63■□□□□ 0.57
TSC2-202ENST00000350773 CNNM3Q8NE01 707 aa18.63■□□□□ 0.57
TSC2-202ENST00000350773 NEFHP12036 1026 aa18.62■□□□□ 0.57
TSC2-202ENST00000350773 GOLGA8BA8MQT2 603 aa18.62■□□□□ 0.57
TSC2-202ENST00000350773 ZNF165P49910 485 aa18.62■□□□□ 0.57
TSC2-202ENST00000350773 LARP6Q9BRS8 491 aaKnown RBP18.62■□□□□ 0.57
TSC2-202ENST00000350773 FKBP15Q5T1M5 1219 aa18.62■□□□□ 0.57
TSC2-202ENST00000350773 TRMT1Q9NXH9 659 aaKnown RBP18.62■□□□□ 0.57
TSC2-202ENST00000350773 ANAPC15P60006 121 aa18.62■□□□□ 0.57
TSC2-202ENST00000350773 SEPT7Q16181 437 aaKnown RBP18.62■□□□□ 0.57
TSC2-202ENST00000350773 JAKMIP3Q5VZ66 844 aa18.62■□□□□ 0.57
TSC2-202ENST00000350773 KLHL10Q6JEL2 608 aa18.62■□□□□ 0.57
TSC2-202ENST00000350773 TFIP11Q9UBB9 837 aaKnown RBP18.62■□□□□ 0.57
TSC2-202ENST00000350773 GPATCH8Q9UKJ3 1502 aaKnown RBP18.61■□□□□ 0.57
TSC2-202ENST00000350773 SLC12A7Q9Y666 1083 aa18.61■□□□□ 0.57
TSC2-202ENST00000350773 CD109Q6YHK3 1445 aa18.61■□□□□ 0.57
TSC2-202ENST00000350773 SSRP1Q08945 709 aaKnown RBP18.61■□□□□ 0.57
TSC2-202ENST00000350773 TMEM132AQ24JP5 1023 aa18.61■□□□□ 0.57
TSC2-202ENST00000350773 PAXBP1Q9Y5B6 917 aa18.61■□□□□ 0.57
TSC2-202ENST00000350773 GOLGA6L9A6NEM1 432 aa18.61■□□□□ 0.57
TSC2-202ENST00000350773 USHBP1Q8N6Y0 703 aa18.61■□□□□ 0.57
TSC2-202ENST00000350773 POTEB2H3BUK9 544 aa18.6■□□□□ 0.57
TSC2-202ENST00000350773 TMC6Q7Z403 805 aa18.6■□□□□ 0.57
TSC2-202ENST00000350773 PPP1R42Q7Z4L9 355 aa18.6■□□□□ 0.57
TSC2-202ENST00000350773 ZSCAN16Q9H4T2 348 aaPredicted RBP18.6■□□□□ 0.57
TSC2-202ENST00000350773 PRAG1Q86YV5 1406 aa18.6■□□□□ 0.57
TSC2-202ENST00000350773 ZC3H6P61129 1189 aaKnown RBP18.6■□□□□ 0.57
TSC2-202ENST00000350773 PIBF1Q8WXW3 757 aa18.6■□□□□ 0.57
TSC2-202ENST00000350773 CCT2P78371 535 aaKnown RBP18.6■□□□□ 0.57
TSC2-202ENST00000350773 CCDC150Q8NCX0 1101 aa18.6■□□□□ 0.57
TSC2-202ENST00000350773 SEPT11Q9NVA2 429 aaKnown RBP18.6■□□□□ 0.57
TSC2-202ENST00000350773 SHTN1A0MZ66 631 aa18.6■□□□□ 0.57
TSC2-202ENST00000350773 MAP3K12Q12852 859 aa18.6■□□□□ 0.57
TSC2-202ENST00000350773 PPP4R3BQ5MIZ7 849 aa18.6■□□□□ 0.57
TSC2-202ENST00000350773 ANKRD18AQ8IVF6 992 aa18.6■□□□□ 0.57
TSC2-202ENST00000350773 NEK1Q96PY6 1258 aa18.6■□□□□ 0.57
TSC2-202ENST00000350773 ITSN2Q9NZM3 1697 aa18.59■□□□□ 0.57
TSC2-202ENST00000350773 POLR3AO14802 1390 aaPredicted RBP18.59■□□□□ 0.57
TSC2-202ENST00000350773 GOLGA8AA7E2F4 631 aa18.59■□□□□ 0.57
TSC2-202ENST00000350773 ZRSR2Q15696 482 aaKnown RBP18.59■□□□□ 0.57
TSC2-202ENST00000350773 ZNF287Q9HBT7 754 aa18.59■□□□□ 0.57
TSC2-202ENST00000350773 ABCF2Q9UG63 623 aa18.59■□□□□ 0.57
TSC2-202ENST00000350773 CALCOCO1Q9P1Z2 691 aa18.59■□□□□ 0.57
TSC2-202ENST00000350773 IFIT5Q13325 482 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms