RNA–Protein interactions for RNA: ENST00000350771.7

H2AFV-204, Transcript of H2A histone family member V, humanhuman

TSL 2 BASIC

Gene H2AFV, Length 687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-204ENST00000350771 TEX13AQ9BXU3 409 aaPredicted RBP34.01■■■■□ 3.03
H2AFV-204ENST00000350771 RTCBQ9Y3I0 505 aaKnown RBP34.01■■■■□ 3.03
H2AFV-204ENST00000350771 C4AP0C0L4 1744 aa33.99■■■■□ 3.03
H2AFV-204ENST00000350771 CHD4Q14839 1912 aa33.99■■■■□ 3.03
H2AFV-204ENST00000350771 CCDC87Q9NVE4 849 aa33.99■■■■□ 3.03
H2AFV-204ENST00000350771 MIS18AQ9NYP9 233 aa33.99■■■■□ 3.03
H2AFV-204ENST00000350771 PHF14O94880 888 aa33.98■■■■□ 3.03
H2AFV-204ENST00000350771 SMIM5Q71RC9 77 aa33.98■■■■□ 3.03
H2AFV-204ENST00000350771 STARD3NLO95772 234 aa33.96■■■■□ 3.03
H2AFV-204ENST00000350771 NCBP3Q53F19 620 aaKnown RBP33.96■■■■□ 3.03
H2AFV-204ENST00000350771 LAMB4A4D0S4 1761 aa33.94■■■■□ 3.02
H2AFV-204ENST00000350771 SNRPA1P09661 255 aaKnown RBP33.94■■■■□ 3.02
H2AFV-204ENST00000350771 TRAPPC3LQ5T215 181 aa33.94■■■■□ 3.02
H2AFV-204ENST00000350771 SOS1Q07889 1333 aaPredicted RBP33.94■■■■□ 3.02
H2AFV-204ENST00000350771 EIF4A1P60842 406 aaKnown RBP33.93■■■■□ 3.02
H2AFV-204ENST00000350771 KLHL34Q8N239 644 aa33.93■■■■□ 3.02
H2AFV-204ENST00000350771 ZBTB1Q9Y2K1 713 aa33.93■■■■□ 3.02
H2AFV-204ENST00000350771 CCER2I3L3R5 266 aa33.92■■■■□ 3.02
H2AFV-204ENST00000350771 ARHGEF1Q92888 912 aaKnown RBP33.92■■■■□ 3.02
H2AFV-204ENST00000350771 CHL1O00533 1208 aa33.91■■■■□ 3.02
H2AFV-204ENST00000350771 CCDC27Q2M243 656 aa33.91■■■■□ 3.02
H2AFV-204ENST00000350771 TSPYL4Q9UJ04 414 aa33.91■■■■□ 3.02
H2AFV-204ENST00000350771 DIEXFQ68CQ4 756 aaKnown RBP33.9■■■■□ 3.02
H2AFV-204ENST00000350771 PRAMEF22A3QJZ6 481 aa33.89■■■■□ 3.02
H2AFV-204ENST00000350771 USP16Q9Y5T5 823 aa33.89■■■■□ 3.02
H2AFV-204ENST00000350771 GIGYF1O75420 1035 aaPredicted RBP33.88■■■■□ 3.01
H2AFV-204ENST00000350771 COL15A1P39059 1388 aa33.86■■■■□ 3.01
H2AFV-204ENST00000350771 ZNF853P0CG23 659 aa33.86■■■■□ 3.01
H2AFV-204ENST00000350771 EIF5P55010 431 aaKnown RBP33.86■■■■□ 3.01
H2AFV-204ENST00000350771 FAM9BQ8IZU0 186 aa33.86■■■■□ 3.01
H2AFV-204ENST00000350771 CFAP44Q96MT7 982 aa33.86■■■■□ 3.01
H2AFV-204ENST00000350771 RFC4P35249 363 aa33.85■■■■□ 3.01
H2AFV-204ENST00000350771 CALD1Q05682 793 aaKnown RBP33.85■■■■□ 3.01
H2AFV-204ENST00000350771 GPR162Q16538 588 aa33.85■■■■□ 3.01
H2AFV-204ENST00000350771 USP42Q9H9J4 1324 aaKnown RBP33.84■■■■□ 3.01
H2AFV-204ENST00000350771 MSL1Q68DK7 614 aa33.84■■■■□ 3.01
H2AFV-204ENST00000350771 A1BGP04217 495 aa33.83■■■■□ 3.01
H2AFV-204ENST00000350771 IL6STP40189 918 aaPredicted RBP33.83■■■■□ 3.01
H2AFV-204ENST00000350771 GYS1P13807 737 aa33.82■■■■□ 3
H2AFV-204ENST00000350771 CANXP27824 592 aaKnown RBP33.82■■■■□ 3
H2AFV-204ENST00000350771 IFT57Q9NWB7 429 aa33.82■■■■□ 3
H2AFV-204ENST00000350771 WWC1Q8IX03 1113 aa33.81■■■■□ 3
H2AFV-204ENST00000350771 NLGN1Q8N2Q7 840 aa33.79■■■■□ 3
H2AFV-204ENST00000350771 NGEFQ8N5V2 710 aa33.78■■■■□ 3
H2AFV-204ENST00000350771 NARFQ9UHQ1 456 aa33.78■■■■□ 3
H2AFV-204ENST00000350771 A0A087WZG4 1122 aa33.77■■■■□ 3
H2AFV-204ENST00000350771 GNAI1P63096 354 aa33.77■■■■□ 3
H2AFV-204ENST00000350771 NLGN2Q8NFZ4 835 aa33.77■■■■□ 3
H2AFV-204ENST00000350771 SRP68Q9UHB9 627 aaKnown RBP33.77■■■■□ 3
H2AFV-204ENST00000350771 SCN7AQ01118 1682 aa33.77■■■■□ 3
H2AFV-204ENST00000350771 NBPF26B4DH59 902 aa33.76■■■□□ 2.99
H2AFV-204ENST00000350771 NBPF10Q6P3W6 841 aaKnown RBP33.76■■■□□ 2.99
H2AFV-204ENST00000350771 NBPF15Q8N660 670 aa33.76■■■□□ 2.99
H2AFV-204ENST00000350771 MBIPQ9NS73 344 aa33.76■■■□□ 2.99
H2AFV-204ENST00000350771 LAS1LQ9Y4W2 734 aaKnown RBP33.76■■■□□ 2.99
H2AFV-204ENST00000350771 PELP1Q8IZL8 1130 aaKnown RBP33.75■■■□□ 2.99
H2AFV-204ENST00000350771 CD2APQ9Y5K6 639 aa33.75■■■□□ 2.99
H2AFV-204ENST00000350771 IL16Q14005 1332 aa33.74■■■□□ 2.99
H2AFV-204ENST00000350771 ERBB4Q15303 1308 aa33.74■■■□□ 2.99
H2AFV-204ENST00000350771 UTRNP46939 3433 aa33.73■■■□□ 2.99
H2AFV-204ENST00000350771 ZPR1O75312 459 aa33.73■■■□□ 2.99
H2AFV-204ENST00000350771 BCORQ6W2J9 1755 aa33.72■■■□□ 2.99
H2AFV-204ENST00000350771 FKBP8Q14318 412 aa33.72■■■□□ 2.99
H2AFV-204ENST00000350771 USPL1Q5W0Q7 1092 aa33.72■■■□□ 2.99
H2AFV-204ENST00000350771 SENP3-EIF4A1A0A087X0R7 540 aa33.71■■■□□ 2.99
H2AFV-204ENST00000350771 HOXB7P09629 217 aa33.71■■■□□ 2.99
H2AFV-204ENST00000350771 MIER1Q8N108 512 aa33.71■■■□□ 2.99
H2AFV-204ENST00000350771 BCL2L12Q9HB09 334 aa33.71■■■□□ 2.99
H2AFV-204ENST00000350771 MMP10P09238 476 aa33.7■■■□□ 2.99
H2AFV-204ENST00000350771 PIP4K2AP48426 406 aaPredicted RBP33.7■■■□□ 2.99
H2AFV-204ENST00000350771 KRT24Q2M2I5 525 aa33.69■■■□□ 2.98
H2AFV-204ENST00000350771 GRIN3BO60391 1043 aa33.68■■■□□ 2.98
H2AFV-204ENST00000350771 WDR63Q8IWG1 891 aa33.68■■■□□ 2.98
H2AFV-204ENST00000350771 ZNF784Q8NCA9 323 aaPredicted RBP33.68■■■□□ 2.98
H2AFV-204ENST00000350771 RGL2O15211 777 aa33.66■■■□□ 2.98
H2AFV-204ENST00000350771 TM4SF1P30408 202 aa33.66■■■□□ 2.98
H2AFV-204ENST00000350771 KIF13BQ9NQT8 1826 aa33.65■■■□□ 2.98
H2AFV-204ENST00000350771 CAMTA2O94983 1202 aa33.65■■■□□ 2.98
H2AFV-204ENST00000350771 NPM2Q86SE8 214 aaKnown RBP33.65■■■□□ 2.98
H2AFV-204ENST00000350771 TBC1D2BQ9UPU7 963 aa33.65■■■□□ 2.98
H2AFV-204ENST00000350771 ZNF330Q9Y3S2 320 aaPredicted RBP33.65■■■□□ 2.98
H2AFV-204ENST00000350771 ZNF521Q96K83 1311 aa33.64■■■□□ 2.98
H2AFV-204ENST00000350771 PDIA6Q15084 440 aa33.64■■■□□ 2.98
H2AFV-204ENST00000350771 LRP10Q7Z4F1 713 aa33.64■■■□□ 2.98
H2AFV-204ENST00000350771 DZIP3Q86Y13 1208 aaKnown RBP33.64■■■□□ 2.98
H2AFV-204ENST00000350771 NRXN2Q9P2S2 1712 aa33.62■■■□□ 2.97
H2AFV-204ENST00000350771 DDR1Q08345 913 aa33.62■■■□□ 2.97
H2AFV-204ENST00000350771 EIF2S2P20042 333 aaKnown RBP33.61■■■□□ 2.97
H2AFV-204ENST00000350771 DUSP27Q5VZP5 1158 aa33.61■■■□□ 2.97
H2AFV-204ENST00000350771 SALL2Q9Y467 1007 aaPredicted RBP33.61■■■□□ 2.97
H2AFV-204ENST00000350771 POLRMTO00411 1230 aaKnown RBP33.6■■■□□ 2.97
H2AFV-204ENST00000350771 NFIXQ14938 502 aa33.6■■■□□ 2.97
H2AFV-204ENST00000350771 C10orf71Q711Q0 1435 aa33.6■■■□□ 2.97
H2AFV-204ENST00000350771 GOLGB1Q14789 3259 aaKnown RBP33.59■■■□□ 2.97
H2AFV-204ENST00000350771 YBX3P16989 372 aaKnown RBP eCLIP33.59■■■□□ 2.97
H2AFV-204ENST00000350771 CLEC4GQ6UXB4 293 aa33.59■■■□□ 2.97
H2AFV-204ENST00000350771 PARP3Q9Y6F1 533 aa33.59■■■□□ 2.97
H2AFV-204ENST00000350771 AFDNP55196 1824 aaKnown RBP33.58■■■□□ 2.97
H2AFV-204ENST00000350771 TSR2Q969E8 191 aaKnown RBP33.58■■■□□ 2.97
H2AFV-204ENST00000350771 C8orf58Q8NAV2 365 aa33.57■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms