RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 FLAD1Q8NFF5 587 aa18.13■□□□□ 0.49
SEC13-202ENST00000350697 USP16Q9Y5T5 823 aa18.13■□□□□ 0.49
SEC13-202ENST00000350697 PNPLA7Q6ZV29 1317 aa18.12■□□□□ 0.49
SEC13-202ENST00000350697 ZNF521Q96K83 1311 aa18.12■□□□□ 0.49
SEC13-202ENST00000350697 RPS6KA4O75676 772 aa18.12■□□□□ 0.49
SEC13-202ENST00000350697 SSFA2P28290 1259 aa18.12■□□□□ 0.49
SEC13-202ENST00000350697 INTS5Q6P9B9 1019 aaKnown RBP18.12■□□□□ 0.49
SEC13-202ENST00000350697 RTCBQ9Y3I0 505 aaKnown RBP18.12■□□□□ 0.49
SEC13-202ENST00000350697 LAMB4A4D0S4 1761 aa18.1■□□□□ 0.49
SEC13-202ENST00000350697 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.1■□□□□ 0.49
SEC13-202ENST00000350697 AMIGO3Q86WK7 504 aa18.1■□□□□ 0.49
SEC13-202ENST00000350697 ZBTB1Q9Y2K1 713 aa18.1■□□□□ 0.49
SEC13-202ENST00000350697 CASZ1Q86V15 1759 aa18.09■□□□□ 0.49
SEC13-202ENST00000350697 PHF14O94880 888 aa18.09■□□□□ 0.49
SEC13-202ENST00000350697 ADRA2BP18089 450 aa18.09■□□□□ 0.49
SEC13-202ENST00000350697 TSR2Q969E8 191 aaKnown RBP18.09■□□□□ 0.49
SEC13-202ENST00000350697 A1BGP04217 495 aa18.08■□□□□ 0.49
SEC13-202ENST00000350697 HOXB7P09629 217 aa18.08■□□□□ 0.49
SEC13-202ENST00000350697 CANXP27824 592 aaKnown RBP18.08■□□□□ 0.49
SEC13-202ENST00000350697 KRT24Q2M2I5 525 aa18.08■□□□□ 0.49
SEC13-202ENST00000350697 TRAPPC3LQ5T215 181 aa18.08■□□□□ 0.49
SEC13-202ENST00000350697 COL23A1Q86Y22 540 aaPredicted RBP18.08■□□□□ 0.49
SEC13-202ENST00000350697 PDGFDQ9GZP0 370 aaPredicted RBP18.08■□□□□ 0.49
SEC13-202ENST00000350697 MSH5O43196 834 aa18.07■□□□□ 0.48
SEC13-202ENST00000350697 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
SEC13-202ENST00000350697 GOLGA2Q08379 1002 aa18.07■□□□□ 0.48
SEC13-202ENST00000350697 SMIM5Q71RC9 77 aa18.07■□□□□ 0.48
SEC13-202ENST00000350697 MYH16Q9H6N6 1097 aa18.07■□□□□ 0.48
SEC13-202ENST00000350697 SOS1Q07889 1333 aaPredicted RBP18.07■□□□□ 0.48
SEC13-202ENST00000350697 FANCIQ9NVI1 1328 aa18.07■□□□□ 0.48
SEC13-202ENST00000350697 DUSP27Q5VZP5 1158 aa18.06■□□□□ 0.48
SEC13-202ENST00000350697 SLC16A10Q8TF71 515 aa18.06■□□□□ 0.48
SEC13-202ENST00000350697 SPINK5Q9NQ38 1064 aaPredicted RBP18.06■□□□□ 0.48
SEC13-202ENST00000350697 IL6STP40189 918 aaPredicted RBP18.06■□□□□ 0.48
SEC13-202ENST00000350697 ARHGEF1Q92888 912 aaKnown RBP18.06■□□□□ 0.48
SEC13-202ENST00000350697 EIF2S2P20042 333 aaKnown RBP18.05■□□□□ 0.48
SEC13-202ENST00000350697 RFC4P35249 363 aa18.05■□□□□ 0.48
SEC13-202ENST00000350697 EIF5P55010 431 aaKnown RBP18.05■□□□□ 0.48
SEC13-202ENST00000350697 ERBB4Q15303 1308 aa18.05■□□□□ 0.48
SEC13-202ENST00000350697 COL15A1P39059 1388 aa18.05■□□□□ 0.48
SEC13-202ENST00000350697 E9PSI1 815 aa18.04■□□□□ 0.48
SEC13-202ENST00000350697 NPM2Q86SE8 214 aaKnown RBP18.04■□□□□ 0.48
SEC13-202ENST00000350697 C8orf58Q8NAV2 365 aa18.04■□□□□ 0.48
SEC13-202ENST00000350697 MTFR1LQ9H019 292 aa18.04■□□□□ 0.48
SEC13-202ENST00000350697 C4AP0C0L4 1744 aa18.03■□□□□ 0.48
SEC13-202ENST00000350697 A0A087WZG4 1122 aa18.03■□□□□ 0.48
SEC13-202ENST00000350697 NBPF26B4DH59 902 aa18.03■□□□□ 0.48
SEC13-202ENST00000350697 ELL2O00472 640 aaPredicted RBP18.03■□□□□ 0.48
SEC13-202ENST00000350697 ZBTB7AO95365 584 aa18.03■□□□□ 0.48
SEC13-202ENST00000350697 PIP4K2AP48426 406 aaPredicted RBP18.03■□□□□ 0.48
SEC13-202ENST00000350697 NBPF10Q6P3W6 841 aaKnown RBP18.03■□□□□ 0.48
SEC13-202ENST00000350697 NBPF15Q8N660 670 aa18.03■□□□□ 0.48
SEC13-202ENST00000350697 ZNF330Q9Y3S2 320 aaPredicted RBP18.03■□□□□ 0.48
SEC13-202ENST00000350697 SLFN5Q08AF3 891 aa18.02■□□□□ 0.48
SEC13-202ENST00000350697 HDGFL1Q5TGJ6 251 aa18.02■□□□□ 0.48
SEC13-202ENST00000350697 CHMP4AQ9BY43 222 aa18.02■□□□□ 0.48
SEC13-202ENST00000350697 TSPYL6Q8N831 410 aa18.01■□□□□ 0.47
SEC13-202ENST00000350697 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
SEC13-202ENST00000350697 USP42Q9H9J4 1324 aaKnown RBP18■□□□□ 0.47
SEC13-202ENST00000350697 EXOSC9Q06265 439 aaKnown RBP18■□□□□ 0.47
SEC13-202ENST00000350697 TWISTNBQ3B726 338 aaPredicted RBP18■□□□□ 0.47
SEC13-202ENST00000350697 CDCA7LQ96GN5 454 aa18■□□□□ 0.47
SEC13-202ENST00000350697 SPON1Q9HCB6 807 aa18■□□□□ 0.47
SEC13-202ENST00000350697 NARFQ9UHQ1 456 aa18■□□□□ 0.47
SEC13-202ENST00000350697 ZPR1O75312 459 aa17.99■□□□□ 0.47
SEC13-202ENST00000350697 MYL6BP14649 208 aa17.99■□□□□ 0.47
SEC13-202ENST00000350697 PDIA6Q15084 440 aa17.99■□□□□ 0.47
SEC13-202ENST00000350697 ATF5Q9Y2D1 282 aaPredicted RBP17.99■□□□□ 0.47
SEC13-202ENST00000350697 ZBED9Q6R2W3 1325 aa17.99■□□□□ 0.47
SEC13-202ENST00000350697 DDX21Q9NR30 783 aaKnown RBP eCLIP17.98■□□□□ 0.473e-7■■■□□ 17.1
SEC13-202ENST00000350697 DBF4Q9UBU7 674 aaPredicted RBP17.98■□□□□ 0.47
SEC13-202ENST00000350697 SRP68Q9UHB9 627 aaKnown RBP17.98■□□□□ 0.47
SEC13-202ENST00000350697 GYS1P13807 737 aa17.98■□□□□ 0.47
SEC13-202ENST00000350697 CCDC30Q5VVM6 783 aa17.98■□□□□ 0.47
SEC13-202ENST00000350697 DZIP3Q86Y13 1208 aaKnown RBP17.98■□□□□ 0.47
SEC13-202ENST00000350697 TRMT2AQ8IZ69 625 aaKnown RBP17.98■□□□□ 0.47
SEC13-202ENST00000350697 NLGN1Q8N2Q7 840 aa17.98■□□□□ 0.47
SEC13-202ENST00000350697 ARXQ96QS3 562 aa17.98■□□□□ 0.47
SEC13-202ENST00000350697 CHPF2Q9P2E5 772 aa17.98■□□□□ 0.47
SEC13-202ENST00000350697 TBC1D2BQ9UPU7 963 aa17.98■□□□□ 0.47
SEC13-202ENST00000350697 COL24A1Q17RW2 1714 aa17.97■□□□□ 0.47
SEC13-202ENST00000350697 PROSER3Q2NL68 480 aa17.97■□□□□ 0.47
SEC13-202ENST00000350697 USPL1Q5W0Q7 1092 aa17.97■□□□□ 0.47
SEC13-202ENST00000350697 MSL1Q68DK7 614 aa17.97■□□□□ 0.47
SEC13-202ENST00000350697 VAMP4O75379 141 aa17.96■□□□□ 0.47
SEC13-202ENST00000350697 ANXA1P04083 346 aa17.96■□□□□ 0.47
SEC13-202ENST00000350697 LRP10Q7Z4F1 713 aa17.96■□□□□ 0.47
SEC13-202ENST00000350697 LRP5O75197 1615 aa17.95■□□□□ 0.46
SEC13-202ENST00000350697 CAMTA2O94983 1202 aa17.95■□□□□ 0.46
SEC13-202ENST00000350697 POLD1P28340 1107 aa17.95■□□□□ 0.46
SEC13-202ENST00000350697 PTGER2P43116 358 aa17.95■□□□□ 0.46
SEC13-202ENST00000350697 SGIP1Q9BQI5 828 aa17.95■□□□□ 0.46
SEC13-202ENST00000350697 HYPKQ9NX55 129 aa17.95■□□□□ 0.46
SEC13-202ENST00000350697 SCN7AQ01118 1682 aa17.95■□□□□ 0.46
SEC13-202ENST00000350697 FKBP8Q14318 412 aa17.94■□□□□ 0.46
SEC13-202ENST00000350697 STK31Q9BXU1 1019 aa17.94■□□□□ 0.46
SEC13-202ENST00000350697 BCL2L12Q9HB09 334 aa17.94■□□□□ 0.46
SEC13-202ENST00000350697 BCORQ6W2J9 1755 aa17.93■□□□□ 0.46
SEC13-202ENST00000350697 RGL2O15211 777 aa17.93■□□□□ 0.46
SEC13-202ENST00000350697 KIF6Q6ZMV9 814 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms