RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 PIP4K2AP48426 406 aaPredicted RBP16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 PROSER3Q2NL68 480 aa16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 NBPF14Q5TI25 921 aa16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 NBPF10Q6P3W6 841 aaKnown RBP16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 LRP10Q7Z4F1 713 aa16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 NBPF15Q8N660 670 aa16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 CCNL1Q9UK58 526 aaPredicted RBP16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 TCERG1O14776 1098 aaKnown RBP16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 PDIA6Q15084 440 aa16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 ZNF827Q17R98 1081 aa16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 TWISTNBQ3B726 338 aaPredicted RBP16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 INTS5Q6P9B9 1019 aaKnown RBP16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 VSIG10Q8N0Z9 540 aa16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 NECTIN2Q92692 538 aa16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 ANO8Q9HCE9 1232 aaPredicted RBP16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 SNRPA1P09661 255 aaKnown RBP16.5■□□□□ 0.23
ERGIC3-202ENST00000348547 ATP6V1AP38606 617 aa16.5■□□□□ 0.23
ERGIC3-202ENST00000348547 CACNA1FO60840 1977 aa16.49■□□□□ 0.23
ERGIC3-202ENST00000348547 QSER1Q2KHR3 1735 aa16.49■□□□□ 0.23
ERGIC3-202ENST00000348547 ANXA1P04083 346 aa16.49■□□□□ 0.23
ERGIC3-202ENST00000348547 A1BGP04217 495 aa16.49■□□□□ 0.23
ERGIC3-202ENST00000348547 HOXB7P09629 217 aa16.47■□□□□ 0.23
ERGIC3-202ENST00000348547 CRKLP46109 303 aaKnown RBP16.47■□□□□ 0.23
ERGIC3-202ENST00000348547 SLC27A3Q5K4L6 730 aa16.47■□□□□ 0.23
ERGIC3-202ENST00000348547 CCDC125Q86Z20 511 aa16.47■□□□□ 0.23
ERGIC3-202ENST00000348547 ZBTB1Q9Y2K1 713 aa16.47■□□□□ 0.23
ERGIC3-202ENST00000348547 BCORQ6W2J9 1755 aa16.47■□□□□ 0.23
ERGIC3-202ENST00000348547 SCN7AQ01118 1682 aa16.46■□□□□ 0.23
ERGIC3-202ENST00000348547 EIF2S2P20042 333 aaKnown RBP16.46■□□□□ 0.23
ERGIC3-202ENST00000348547 BAG6P46379 1132 aa16.46■□□□□ 0.23
ERGIC3-202ENST00000348547 SSH1Q8WYL5 1049 aa16.46■□□□□ 0.23
ERGIC3-202ENST00000348547 CHPF2Q9P2E5 772 aa16.46■□□□□ 0.23
ERGIC3-202ENST00000348547 CNTNAP4Q9C0A0 1308 aa16.45■□□□□ 0.22
ERGIC3-202ENST00000348547 ARFGEF2Q9Y6D5 1785 aa16.45■□□□□ 0.22
ERGIC3-202ENST00000348547 HDGFL1Q5TGJ6 251 aa16.45■□□□□ 0.22
ERGIC3-202ENST00000348547 G2E3Q7L622 706 aa16.45■□□□□ 0.22
ERGIC3-202ENST00000348547 AKT1S1Q96B36 256 aa16.45■□□□□ 0.22
ERGIC3-202ENST00000348547 BCL2L13Q9BXK5 485 aa16.45■□□□□ 0.22
ERGIC3-202ENST00000348547 RARSP54136 660 aaKnown RBP16.44■□□□□ 0.22
ERGIC3-202ENST00000348547 CCDC87Q9NVE4 849 aa16.44■□□□□ 0.22
ERGIC3-202ENST00000348547 CASZ1Q86V15 1759 aa16.44■□□□□ 0.22
ERGIC3-202ENST00000348547 SOS1Q07889 1333 aaPredicted RBP16.44■□□□□ 0.22
ERGIC3-202ENST00000348547 BCAR3O75815 825 aa16.42■□□□□ 0.22
ERGIC3-202ENST00000348547 SF3B2Q13435 895 aaKnown RBP16.42■□□□□ 0.22
ERGIC3-202ENST00000348547 N4BP2Q86UW6 1770 aaPredicted RBP16.42■□□□□ 0.22
ERGIC3-202ENST00000348547 NUP98P52948 1817 aa16.42■□□□□ 0.22
ERGIC3-202ENST00000348547 STARD3NLO95772 234 aa16.41■□□□□ 0.22
ERGIC3-202ENST00000348547 EIF5P55010 431 aaKnown RBP16.41■□□□□ 0.22
ERGIC3-202ENST00000348547 RC3H1Q5TC82 1133 aaKnown RBP16.41■□□□□ 0.22
ERGIC3-202ENST00000348547 MRPL50Q8N5N7 158 aaKnown RBP16.41■□□□□ 0.22
ERGIC3-202ENST00000348547 PDGFDQ9GZP0 370 aaPredicted RBP16.41■□□□□ 0.22
ERGIC3-202ENST00000348547 PHAXQ9H814 394 aaKnown RBP16.41■□□□□ 0.22
ERGIC3-202ENST00000348547 MYL6BP14649 208 aa16.4■□□□□ 0.22
ERGIC3-202ENST00000348547 CANXP27824 592 aaKnown RBP16.4■□□□□ 0.22
ERGIC3-202ENST00000348547 TEX13AQ9BXU3 409 aaPredicted RBP16.4■□□□□ 0.22
ERGIC3-202ENST00000348547 DDX21Q9NR30 783 aaKnown RBP eCLIP16.4■□□□□ 0.22
ERGIC3-202ENST00000348547 TNNQ9UQP3 1299 aa16.4■□□□□ 0.22
ERGIC3-202ENST00000348547 ANKRD36CQ5JPF3 1778 aa16.4■□□□□ 0.22
ERGIC3-202ENST00000348547 GNPATO15228 680 aa16.39■□□□□ 0.21
ERGIC3-202ENST00000348547 CT47B1P0C2W7 299 aaPredicted RBP16.39■□□□□ 0.21
ERGIC3-202ENST00000348547 TTLL7Q6ZT98 887 aa16.39■□□□□ 0.21
ERGIC3-202ENST00000348547 ERBB4Q15303 1308 aa16.39■□□□□ 0.21
ERGIC3-202ENST00000348547 ADCY9O60503 1353 aa16.39■□□□□ 0.21
ERGIC3-202ENST00000348547 COL15A1P39059 1388 aa16.39■□□□□ 0.21
ERGIC3-202ENST00000348547 CCDC30Q5VVM6 783 aa16.38■□□□□ 0.21
ERGIC3-202ENST00000348547 PNPLA7Q6ZV29 1317 aa16.38■□□□□ 0.21
ERGIC3-202ENST00000348547 RPS6KA4O75676 772 aa16.38■□□□□ 0.21
ERGIC3-202ENST00000348547 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
ERGIC3-202ENST00000348547 DBF4Q9UBU7 674 aaPredicted RBP16.38■□□□□ 0.21
ERGIC3-202ENST00000348547 RCAN3Q9UKA8 241 aa16.38■□□□□ 0.21
ERGIC3-202ENST00000348547 COL24A1Q17RW2 1714 aa16.37■□□□□ 0.21
ERGIC3-202ENST00000348547 IL6STP40189 918 aaPredicted RBP16.37■□□□□ 0.21
ERGIC3-202ENST00000348547 ALDH1L2Q3SY69 923 aa16.37■□□□□ 0.21
ERGIC3-202ENST00000348547 XAGE3Q8WTP9 111 aa16.37■□□□□ 0.21
ERGIC3-202ENST00000348547 SMC4Q9NTJ3 1288 aa16.37■□□□□ 0.21
ERGIC3-202ENST00000348547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.36■□□□□ 0.21
ERGIC3-202ENST00000348547 SLC15A2Q16348 729 aa16.36■□□□□ 0.21
ERGIC3-202ENST00000348547 AK7Q96M32 723 aa16.36■□□□□ 0.21
ERGIC3-202ENST00000348547 BCL2L12Q9HB09 334 aa16.36■□□□□ 0.21
ERGIC3-202ENST00000348547 SRP68Q9UHB9 627 aaKnown RBP16.36■□□□□ 0.21
ERGIC3-202ENST00000348547 PHF14O94880 888 aa16.35■□□□□ 0.21
ERGIC3-202ENST00000348547 BRPF1P55201 1214 aaPredicted RBP16.35■□□□□ 0.21
ERGIC3-202ENST00000348547 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
ERGIC3-202ENST00000348547 COL23A1Q86Y22 540 aaPredicted RBP16.35■□□□□ 0.21
ERGIC3-202ENST00000348547 ZNF428Q96B54 188 aa16.35■□□□□ 0.21
ERGIC3-202ENST00000348547 CAMTA2O94983 1202 aa16.34■□□□□ 0.21
ERGIC3-202ENST00000348547 FLIIQ13045 1269 aa16.34■□□□□ 0.21
ERGIC3-202ENST00000348547 ARHGEF1Q92888 912 aaKnown RBP16.34■□□□□ 0.21
ERGIC3-202ENST00000348547 HYPKQ9NX55 129 aa16.34■□□□□ 0.21
ERGIC3-202ENST00000348547 TBC1D2BQ9UPU7 963 aa16.34■□□□□ 0.21
ERGIC3-202ENST00000348547 AFDNP55196 1824 aaKnown RBP16.34■□□□□ 0.21
ERGIC3-202ENST00000348547 GOLGB1Q14789 3259 aaKnown RBP16.33■□□□□ 0.2
ERGIC3-202ENST00000348547 AIMP1Q12904 312 aaKnown RBP16.33■□□□□ 0.2
ERGIC3-202ENST00000348547 HLFQ16534 295 aa16.33■□□□□ 0.2
ERGIC3-202ENST00000348547 STK31Q9BXU1 1019 aa16.33■□□□□ 0.2
ERGIC3-202ENST00000348547 ZNF330Q9Y3S2 320 aaPredicted RBP16.33■□□□□ 0.2
ERGIC3-202ENST00000348547 F6X3S4 739 aa16.32■□□□□ 0.2
ERGIC3-202ENST00000348547 PLIN1O60240 522 aa16.32■□□□□ 0.2
ERGIC3-202ENST00000348547 SSFA2P28290 1259 aa16.32■□□□□ 0.2
ERGIC3-202ENST00000348547 TFCP2L1Q9NZI6 479 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms