RNA–Protein interactions for RNA: ENST00000341983.8

BBC3-202, Transcript of BCL2 binding component 3, humanhuman

TSL 1 (best) BASIC

Gene BBC3, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-202ENST00000341983 CCDC27Q2M243 656 aa28.51■■■□□ 2.15
BBC3-202ENST00000341983 BABAM1Q9NWV8 329 aa28.51■■■□□ 2.15
BBC3-202ENST00000341983 ATF5Q9Y2D1 282 aaPredicted RBP28.51■■■□□ 2.15
BBC3-202ENST00000341983 USP16Q9Y5T5 823 aa28.51■■■□□ 2.15
BBC3-202ENST00000341983 MSH5O43196 834 aa28.5■■■□□ 2.15
BBC3-202ENST00000341983 SNRPA1P09661 255 aaKnown RBP28.5■■■□□ 2.15
BBC3-202ENST00000341983 FLAD1Q8NFF5 587 aa28.5■■■□□ 2.15
BBC3-202ENST00000341983 MTFR1LQ9H019 292 aa28.5■■■□□ 2.15
BBC3-202ENST00000341983 LAS1LQ9Y4W2 734 aaKnown RBP28.5■■■□□ 2.15
BBC3-202ENST00000341983 STARD3NLO95772 234 aa28.48■■■□□ 2.15
BBC3-202ENST00000341983 ZNF853P0CG23 659 aa28.48■■■□□ 2.15
BBC3-202ENST00000341983 WWC1Q8IX03 1113 aa28.48■■■□□ 2.15
BBC3-202ENST00000341983 TEX13AQ9BXU3 409 aaPredicted RBP28.48■■■□□ 2.15
BBC3-202ENST00000341983 SPON1Q9HCB6 807 aa28.48■■■□□ 2.15
BBC3-202ENST00000341983 SOS1Q07889 1333 aaPredicted RBP28.48■■■□□ 2.15
BBC3-202ENST00000341983 GIGYF1O75420 1035 aaPredicted RBP28.48■■■□□ 2.15
BBC3-202ENST00000341983 PTGER2P43116 358 aa28.48■■■□□ 2.15
BBC3-202ENST00000341983 SLC16A10Q8TF71 515 aa28.48■■■□□ 2.15
BBC3-202ENST00000341983 CFAP44Q96MT7 982 aa28.48■■■□□ 2.15
BBC3-202ENST00000341983 SALL2Q9Y467 1007 aaPredicted RBP28.48■■■□□ 2.15
BBC3-202ENST00000341983 NCBP3Q53F19 620 aaKnown RBP28.47■■■□□ 2.15
BBC3-202ENST00000341983 ARHGEF1Q92888 912 aaKnown RBP28.47■■■□□ 2.15
BBC3-202ENST00000341983 TRAPPC3LQ5T215 181 aa28.46■■■□□ 2.15
BBC3-202ENST00000341983 SGIP1Q9BQI5 828 aa28.46■■■□□ 2.15
BBC3-202ENST00000341983 A1BGP04217 495 aa28.45■■■□□ 2.15
BBC3-202ENST00000341983 ADRA2BP18089 450 aa28.45■■■□□ 2.15
BBC3-202ENST00000341983 CANXP27824 592 aaKnown RBP28.45■■■□□ 2.15
BBC3-202ENST00000341983 MBIPQ9NS73 344 aa28.45■■■□□ 2.15
BBC3-202ENST00000341983 KRT24Q2M2I5 525 aa28.44■■■□□ 2.14
BBC3-202ENST00000341983 MSL1Q68DK7 614 aa28.44■■■□□ 2.14
BBC3-202ENST00000341983 IFT57Q9NWB7 429 aa28.44■■■□□ 2.14
BBC3-202ENST00000341983 COL15A1P39059 1388 aa28.43■■■□□ 2.14
BBC3-202ENST00000341983 PIP4K2AP48426 406 aaPredicted RBP28.43■■■□□ 2.14
BBC3-202ENST00000341983 CALD1Q05682 793 aaKnown RBP28.43■■■□□ 2.14
BBC3-202ENST00000341983 EIF5P55010 431 aaKnown RBP28.41■■■□□ 2.14
BBC3-202ENST00000341983 GNAI1P63096 354 aa28.41■■■□□ 2.14
BBC3-202ENST00000341983 SRP68Q9UHB9 627 aaKnown RBP28.4■■■□□ 2.14
BBC3-202ENST00000341983 NBPF26B4DH59 902 aa28.39■■■□□ 2.14
BBC3-202ENST00000341983 RFC4P35249 363 aa28.39■■■□□ 2.14
BBC3-202ENST00000341983 NBPF10Q6P3W6 841 aaKnown RBP28.39■■■□□ 2.14
BBC3-202ENST00000341983 NBPF15Q8N660 670 aa28.39■■■□□ 2.14
BBC3-202ENST00000341983 USP42Q9H9J4 1324 aaKnown RBP28.38■■■□□ 2.13
BBC3-202ENST00000341983 SCN7AQ01118 1682 aa28.37■■■□□ 2.13
BBC3-202ENST00000341983 GYS1P13807 737 aa28.37■■■□□ 2.13
BBC3-202ENST00000341983 IL6STP40189 918 aaPredicted RBP28.37■■■□□ 2.13
BBC3-202ENST00000341983 TSR2Q969E8 191 aaKnown RBP28.36■■■□□ 2.13
BBC3-202ENST00000341983 ZNF330Q9Y3S2 320 aaPredicted RBP28.36■■■□□ 2.13
BBC3-202ENST00000341983 IL16Q14005 1332 aa28.36■■■□□ 2.13
BBC3-202ENST00000341983 BCORQ6W2J9 1755 aa28.35■■■□□ 2.13
BBC3-202ENST00000341983 ZNF521Q96K83 1311 aa28.35■■■□□ 2.13
BBC3-202ENST00000341983 WDR63Q8IWG1 891 aa28.34■■■□□ 2.13
BBC3-202ENST00000341983 NGEFQ8N5V2 710 aa28.34■■■□□ 2.13
BBC3-202ENST00000341983 SPINK5Q9NQ38 1064 aaPredicted RBP28.33■■■□□ 2.13
BBC3-202ENST00000341983 USPL1Q5W0Q7 1092 aa28.33■■■□□ 2.13
BBC3-202ENST00000341983 NARFQ9UHQ1 456 aa28.33■■■□□ 2.13
BBC3-202ENST00000341983 EIF2S2P20042 333 aaKnown RBP28.32■■■□□ 2.12
BBC3-202ENST00000341983 BCL2L12Q9HB09 334 aa28.32■■■□□ 2.12
BBC3-202ENST00000341983 POLD1P28340 1107 aa28.31■■■□□ 2.12
BBC3-202ENST00000341983 FKBP8Q14318 412 aa28.31■■■□□ 2.12
BBC3-202ENST00000341983 DUSP27Q5VZP5 1158 aa28.31■■■□□ 2.12
BBC3-202ENST00000341983 C8orf58Q8NAV2 365 aa28.3■■■□□ 2.12
BBC3-202ENST00000341983 NECTIN2Q92692 538 aa28.3■■■□□ 2.12
BBC3-202ENST00000341983 ARXQ96QS3 562 aa28.3■■■□□ 2.12
BBC3-202ENST00000341983 PPP1R1BQ9UD71 204 aaPredicted RBP28.3■■■□□ 2.12
BBC3-202ENST00000341983 TBC1D2BQ9UPU7 963 aa28.3■■■□□ 2.12
BBC3-202ENST00000341983 FANCIQ9NVI1 1328 aa28.29■■■□□ 2.12
BBC3-202ENST00000341983 ZPR1O75312 459 aa28.29■■■□□ 2.12
BBC3-202ENST00000341983 PDIA6Q15084 440 aa28.29■■■□□ 2.12
BBC3-202ENST00000341983 A0A087WZG4 1122 aa28.28■■■□□ 2.12
BBC3-202ENST00000341983 HOXB7P09629 217 aa28.28■■■□□ 2.12
BBC3-202ENST00000341983 PROSER3Q2NL68 480 aa28.28■■■□□ 2.12
BBC3-202ENST00000341983 NLGN1Q8N2Q7 840 aa28.28■■■□□ 2.12
BBC3-202ENST00000341983 LRP10Q7Z4F1 713 aa28.28■■■□□ 2.12
BBC3-202ENST00000341983 ERBB4Q15303 1308 aa28.27■■■□□ 2.12
BBC3-202ENST00000341983 ELL2O00472 640 aaPredicted RBP28.27■■■□□ 2.12
BBC3-202ENST00000341983 MMP10P09238 476 aa28.27■■■□□ 2.12
BBC3-202ENST00000341983 MYL6BP14649 208 aa28.27■■■□□ 2.12
BBC3-202ENST00000341983 TSPYL6Q8N831 410 aa28.27■■■□□ 2.12
BBC3-202ENST00000341983 CAMTA2O94983 1202 aa28.26■■■□□ 2.11
BBC3-202ENST00000341983 ANXA1P04083 346 aa28.26■■■□□ 2.11
BBC3-202ENST00000341983 DZIP3Q86Y13 1208 aaKnown RBP28.26■■■□□ 2.11
BBC3-202ENST00000341983 HDGFL1Q5TGJ6 251 aa28.24■■■□□ 2.11
BBC3-202ENST00000341983 FHDC1Q9C0D6 1143 aaPredicted RBP28.23■■■□□ 2.11
BBC3-202ENST00000341983 AFDNP55196 1824 aaKnown RBP28.23■■■□□ 2.11
BBC3-202ENST00000341983 DDR1Q08345 913 aa28.23■■■□□ 2.11
BBC3-202ENST00000341983 NPM2Q86SE8 214 aaKnown RBP28.23■■■□□ 2.11
BBC3-202ENST00000341983 CHPF2Q9P2E5 772 aa28.23■■■□□ 2.11
BBC3-202ENST00000341983 NUP98P52948 1817 aa28.22■■■□□ 2.11
BBC3-202ENST00000341983 TTLL7Q6ZT98 887 aa28.22■■■□□ 2.11
BBC3-202ENST00000341983 TM4SF1P30408 202 aa28.21■■■□□ 2.11
BBC3-202ENST00000341983 NFIXQ14938 502 aa28.21■■■□□ 2.11
BBC3-202ENST00000341983 DDX21Q9NR30 783 aaKnown RBP eCLIP28.2■■■□□ 2.16e-8■□□□□ 8.3
BBC3-202ENST00000341983 NRXN2Q9P2S2 1712 aa28.2■■■□□ 2.1
BBC3-202ENST00000341983 KIF13BQ9NQT8 1826 aa28.19■■■□□ 2.1
BBC3-202ENST00000341983 GOLGB1Q14789 3259 aaKnown RBP28.18■■■□□ 2.1
BBC3-202ENST00000341983 TBC1D9BQ66K14 1250 aa28.18■■■□□ 2.1
BBC3-202ENST00000341983 POLRMTO00411 1230 aaKnown RBP28.18■■■□□ 2.1
BBC3-202ENST00000341983 EXOSC9Q06265 439 aaKnown RBP28.18■■■□□ 2.1
BBC3-202ENST00000341983 HLFQ16534 295 aa28.18■■■□□ 2.1
BBC3-202ENST00000341983 MYH16Q9H6N6 1097 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms