RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 STARD3NLO95772 234 aa19.98■□□□□ 0.79
UBE3B-201ENST00000340074 PTGER2P43116 358 aa19.98■□□□□ 0.79
UBE3B-201ENST00000340074 TRAPPC3LQ5T215 181 aa19.98■□□□□ 0.79
UBE3B-201ENST00000340074 TEX13AQ9BXU3 409 aaPredicted RBP19.98■□□□□ 0.79
UBE3B-201ENST00000340074 TSPYL4Q9UJ04 414 aa19.98■□□□□ 0.79
UBE3B-201ENST00000340074 SNRPA1P09661 255 aaKnown RBP19.97■□□□□ 0.79
UBE3B-201ENST00000340074 ADRA2BP18089 450 aa19.96■□□□□ 0.79
UBE3B-201ENST00000340074 EIF4A1P60842 406 aaKnown RBP19.96■□□□□ 0.79
UBE3B-201ENST00000340074 ARHGEF1Q92888 912 aaKnown RBP19.96■□□□□ 0.79
UBE3B-201ENST00000340074 ZBTB1Q9Y2K1 713 aa19.96■□□□□ 0.79
UBE3B-201ENST00000340074 CCER2I3L3R5 266 aa19.95■□□□□ 0.78
UBE3B-201ENST00000340074 MSL1Q68DK7 614 aa19.95■□□□□ 0.78
UBE3B-201ENST00000340074 SGIP1Q9BQI5 828 aa19.95■□□□□ 0.78
UBE3B-201ENST00000340074 BABAM1Q9NWV8 329 aa19.95■□□□□ 0.78
UBE3B-201ENST00000340074 LAS1LQ9Y4W2 734 aaKnown RBP19.95■□□□□ 0.78
UBE3B-201ENST00000340074 USP16Q9Y5T5 823 aa19.95■□□□□ 0.78
UBE3B-201ENST00000340074 SOS1Q07889 1333 aaPredicted RBP19.94■□□□□ 0.78
UBE3B-201ENST00000340074 CHL1O00533 1208 aa19.93■□□□□ 0.78
UBE3B-201ENST00000340074 CANXP27824 592 aaKnown RBP19.93■□□□□ 0.78
UBE3B-201ENST00000340074 RFC4P35249 363 aa19.93■□□□□ 0.78
UBE3B-201ENST00000340074 PPP1R1BQ9UD71 204 aaPredicted RBP19.93■□□□□ 0.78
UBE3B-201ENST00000340074 GIGYF1O75420 1035 aaPredicted RBP19.93■□□□□ 0.78
UBE3B-201ENST00000340074 A1BGP04217 495 aa19.93■□□□□ 0.78
UBE3B-201ENST00000340074 MIER1Q8N108 512 aa19.93■□□□□ 0.78
UBE3B-201ENST00000340074 CCDC27Q2M243 656 aa19.92■□□□□ 0.78
UBE3B-201ENST00000340074 CFAP44Q96MT7 982 aa19.92■□□□□ 0.78
UBE3B-201ENST00000340074 COL15A1P39059 1388 aa19.91■□□□□ 0.78
UBE3B-201ENST00000340074 CALD1Q05682 793 aaKnown RBP19.91■□□□□ 0.78
UBE3B-201ENST00000340074 SALL2Q9Y467 1007 aaPredicted RBP19.91■□□□□ 0.78
UBE3B-201ENST00000340074 POLD1P28340 1107 aa19.9■□□□□ 0.78
UBE3B-201ENST00000340074 PIP4K2AP48426 406 aaPredicted RBP19.9■□□□□ 0.78
UBE3B-201ENST00000340074 WWC1Q8IX03 1113 aa19.9■□□□□ 0.78
UBE3B-201ENST00000340074 ZNF853P0CG23 659 aa19.89■□□□□ 0.77
UBE3B-201ENST00000340074 EIF5P55010 431 aaKnown RBP19.89■□□□□ 0.77
UBE3B-201ENST00000340074 NCBP3Q53F19 620 aaKnown RBP19.89■□□□□ 0.77
UBE3B-201ENST00000340074 IFT57Q9NWB7 429 aa19.89■□□□□ 0.77
UBE3B-201ENST00000340074 SRP68Q9UHB9 627 aaKnown RBP19.89■□□□□ 0.77
UBE3B-201ENST00000340074 GYS1P13807 737 aa19.88■□□□□ 0.77
UBE3B-201ENST00000340074 IL6STP40189 918 aaPredicted RBP19.88■□□□□ 0.77
UBE3B-201ENST00000340074 ARXQ96QS3 562 aa19.88■□□□□ 0.77
UBE3B-201ENST00000340074 MBIPQ9NS73 344 aa19.88■□□□□ 0.77
UBE3B-201ENST00000340074 ZNF330Q9Y3S2 320 aaPredicted RBP19.88■□□□□ 0.77
UBE3B-201ENST00000340074 USP42Q9H9J4 1324 aaKnown RBP19.88■□□□□ 0.77
UBE3B-201ENST00000340074 BCORQ6W2J9 1755 aa19.87■□□□□ 0.77
UBE3B-201ENST00000340074 GNAI1P63096 354 aa19.87■□□□□ 0.77
UBE3B-201ENST00000340074 SCN7AQ01118 1682 aa19.87■□□□□ 0.77
UBE3B-201ENST00000340074 ZPR1O75312 459 aa19.86■□□□□ 0.77
UBE3B-201ENST00000340074 KRT24Q2M2I5 525 aa19.86■□□□□ 0.77
UBE3B-201ENST00000340074 NBPF26B4DH59 902 aa19.85■□□□□ 0.77
UBE3B-201ENST00000340074 USPL1Q5W0Q7 1092 aa19.85■□□□□ 0.77
UBE3B-201ENST00000340074 NBPF10Q6P3W6 841 aaKnown RBP19.85■□□□□ 0.77
UBE3B-201ENST00000340074 NLGN1Q8N2Q7 840 aa19.85■□□□□ 0.77
UBE3B-201ENST00000340074 NBPF15Q8N660 670 aa19.85■□□□□ 0.77
UBE3B-201ENST00000340074 NARFQ9UHQ1 456 aa19.85■□□□□ 0.77
UBE3B-201ENST00000340074 FKBP8Q14318 412 aa19.85■□□□□ 0.77
UBE3B-201ENST00000340074 A0A087WZG4 1122 aa19.84■□□□□ 0.77
UBE3B-201ENST00000340074 EIF2S2P20042 333 aaKnown RBP19.84■□□□□ 0.77
UBE3B-201ENST00000340074 NPM2Q86SE8 214 aaKnown RBP19.84■□□□□ 0.77
UBE3B-201ENST00000340074 FHDC1Q9C0D6 1143 aaPredicted RBP19.84■□□□□ 0.77
UBE3B-201ENST00000340074 TBC1D2BQ9UPU7 963 aa19.84■□□□□ 0.77
UBE3B-201ENST00000340074 AFDNP55196 1824 aaKnown RBP19.83■□□□□ 0.76
UBE3B-201ENST00000340074 MMP10P09238 476 aa19.83■□□□□ 0.76
UBE3B-201ENST00000340074 NUP98P52948 1817 aa19.82■□□□□ 0.76
UBE3B-201ENST00000340074 IL16Q14005 1332 aa19.81■□□□□ 0.76
UBE3B-201ENST00000340074 DZIP3Q86Y13 1208 aaKnown RBP19.81■□□□□ 0.76
UBE3B-201ENST00000340074 WDR63Q8IWG1 891 aa19.81■□□□□ 0.76
UBE3B-201ENST00000340074 KLHL34Q8N239 644 aa19.81■□□□□ 0.76
UBE3B-201ENST00000340074 NGEFQ8N5V2 710 aa19.81■□□□□ 0.76
UBE3B-201ENST00000340074 NECTIN2Q92692 538 aa19.81■□□□□ 0.76
UBE3B-201ENST00000340074 TSR2Q969E8 191 aaKnown RBP19.81■□□□□ 0.76
UBE3B-201ENST00000340074 BCL2L12Q9HB09 334 aa19.81■□□□□ 0.76
UBE3B-201ENST00000340074 GOLGB1Q14789 3259 aaKnown RBP19.8■□□□□ 0.76
UBE3B-201ENST00000340074 MYL6BP14649 208 aa19.8■□□□□ 0.76
UBE3B-201ENST00000340074 SYT17Q9BSW7 474 aa19.8■□□□□ 0.76
UBE3B-201ENST00000340074 KIF13BQ9NQT8 1826 aa19.8■□□□□ 0.76
UBE3B-201ENST00000340074 ERBB4Q15303 1308 aa19.79■□□□□ 0.76
UBE3B-201ENST00000340074 DUSP27Q5VZP5 1158 aa19.79■□□□□ 0.76
UBE3B-201ENST00000340074 CAMTA2O94983 1202 aa19.78■□□□□ 0.76
UBE3B-201ENST00000340074 HOXB7P09629 217 aa19.78■□□□□ 0.76
UBE3B-201ENST00000340074 C8orf58Q8NAV2 365 aa19.78■□□□□ 0.76
UBE3B-201ENST00000340074 ELL2O00472 640 aaPredicted RBP19.77■□□□□ 0.76
UBE3B-201ENST00000340074 TM4SF1P30408 202 aa19.77■□□□□ 0.76
UBE3B-201ENST00000340074 PDIA6Q15084 440 aa19.77■□□□□ 0.76
UBE3B-201ENST00000340074 PARP3Q9Y6F1 533 aa19.77■□□□□ 0.76
UBE3B-201ENST00000340074 ANXA1P04083 346 aa19.76■□□□□ 0.75
UBE3B-201ENST00000340074 DDR1Q08345 913 aa19.76■□□□□ 0.75
UBE3B-201ENST00000340074 NFIXQ14938 502 aa19.76■□□□□ 0.75
UBE3B-201ENST00000340074 PROSER3Q2NL68 480 aa19.76■□□□□ 0.75
UBE3B-201ENST00000340074 HDGFL1Q5TGJ6 251 aa19.76■□□□□ 0.75
UBE3B-201ENST00000340074 NRXN2Q9P2S2 1712 aa19.76■□□□□ 0.75
UBE3B-201ENST00000340074 ZNF521Q96K83 1311 aa19.76■□□□□ 0.75
UBE3B-201ENST00000340074 SPINK5Q9NQ38 1064 aaPredicted RBP19.76■□□□□ 0.75
UBE3B-201ENST00000340074 FANCIQ9NVI1 1328 aa19.75■□□□□ 0.75
UBE3B-201ENST00000340074 N4BP2Q86UW6 1770 aaPredicted RBP19.75■□□□□ 0.75
UBE3B-201ENST00000340074 POLRMTO00411 1230 aaKnown RBP19.75■□□□□ 0.75
UBE3B-201ENST00000340074 TBC1D9BQ66K14 1250 aa19.75■□□□□ 0.75
UBE3B-201ENST00000340074 BICDL1Q6ZP65 573 aa19.75■□□□□ 0.75
UBE3B-201ENST00000340074 TTLL7Q6ZT98 887 aa19.75■□□□□ 0.75
UBE3B-201ENST00000340074 LRP10Q7Z4F1 713 aa19.75■□□□□ 0.75
UBE3B-201ENST00000340074 TSPYL6Q8N831 410 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms