RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 PLA2G4AP47712 749 aa13.1□□□□□ -0.31
SEC23B-202ENST00000336714 ZSCAN26Q16670 478 aa13.1□□□□□ -0.31
SEC23B-202ENST00000336714 TEX2Q8IWB9 1127 aa13.1□□□□□ -0.31
SEC23B-202ENST00000336714 DHX37Q8IY37 1157 aaKnown RBP13.1□□□□□ -0.31
SEC23B-202ENST00000336714 MIS18AQ9NYP9 233 aa13.1□□□□□ -0.31
SEC23B-202ENST00000336714 ATP6V1DQ9Y5K8 247 aa13.1□□□□□ -0.31
SEC23B-202ENST00000336714 ABCC4O15439 1325 aa13.1□□□□□ -0.31
SEC23B-202ENST00000336714 BECN2A8MW95 431 aa13.1□□□□□ -0.31
SEC23B-202ENST00000336714 SLC20A2Q08357 652 aa13.1□□□□□ -0.31
SEC23B-202ENST00000336714 MAGI1Q96QZ7 1491 aaPredicted RBP13.09□□□□□ -0.31
SEC23B-202ENST00000336714 TMCO3Q6UWJ1 677 aa13.09□□□□□ -0.31
SEC23B-202ENST00000336714 LRRC8AQ8IWT6 810 aa13.09□□□□□ -0.31
SEC23B-202ENST00000336714 RASEFQ8IZ41 740 aa13.09□□□□□ -0.31
SEC23B-202ENST00000336714 NFATC2IPQ8NCF5 419 aa13.09□□□□□ -0.31
SEC23B-202ENST00000336714 FHOD1Q9Y613 1164 aa13.09□□□□□ -0.31
SEC23B-202ENST00000336714 KDM5AP29375 1690 aaKnown RBP13.09□□□□□ -0.31
SEC23B-202ENST00000336714 CDC42BPAQ5VT25 1732 aa13.09□□□□□ -0.31
SEC23B-202ENST00000336714 STK3Q13188 491 aa13.09□□□□□ -0.31
SEC23B-202ENST00000336714 SYCP1Q15431 976 aa13.09□□□□□ -0.31
SEC23B-202ENST00000336714 POLKQ9UBT6 870 aa13.09□□□□□ -0.31
SEC23B-202ENST00000336714 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
SEC23B-202ENST00000336714 KIF3BO15066 747 aa13.09□□□□□ -0.31
SEC23B-202ENST00000336714 RUFY3Q7L099 469 aa13.09□□□□□ -0.31
SEC23B-202ENST00000336714 TSPYL1Q9H0U9 437 aa13.09□□□□□ -0.31
SEC23B-202ENST00000336714 SHPRHQ149N8 1683 aa13.08□□□□□ -0.32
SEC23B-202ENST00000336714 CWC27Q6UX04 472 aaKnown RBP13.08□□□□□ -0.32
SEC23B-202ENST00000336714 SYNJ2O15056 1496 aa13.08□□□□□ -0.32
SEC23B-202ENST00000336714 SHANK2Q9UPX8 1470 aa13.08□□□□□ -0.32
SEC23B-202ENST00000336714 KIAA0556O60303 1618 aa13.08□□□□□ -0.32
SEC23B-202ENST00000336714 OAS2P29728 719 aaKnown RBP13.08□□□□□ -0.32
SEC23B-202ENST00000336714 PTPN21Q16825 1174 aa13.08□□□□□ -0.32
SEC23B-202ENST00000336714 AFAP1Q8N556 730 aa13.08□□□□□ -0.32
SEC23B-202ENST00000336714 MSH6P52701 1360 aa13.08□□□□□ -0.32
SEC23B-202ENST00000336714 SNW1Q13573 536 aaKnown RBP13.07□□□□□ -0.32
SEC23B-202ENST00000336714 LARP1BQ659C4 914 aaKnown RBP13.07□□□□□ -0.32
SEC23B-202ENST00000336714 UBXN4Q92575 508 aa13.07□□□□□ -0.32
SEC23B-202ENST00000336714 KIF1BPQ96EK5 621 aa13.07□□□□□ -0.32
SEC23B-202ENST00000336714 HDAC5Q9UQL6 1122 aa13.07□□□□□ -0.32
SEC23B-202ENST00000336714 SHROOM2Q13796 1616 aa13.07□□□□□ -0.32
SEC23B-202ENST00000336714 SOX12O15370 315 aa13.07□□□□□ -0.32
SEC23B-202ENST00000336714 NR1I2O75469 434 aa13.07□□□□□ -0.32
SEC23B-202ENST00000336714 GNAI1P63096 354 aa13.07□□□□□ -0.32
SEC23B-202ENST00000336714 CDC37L1Q7L3B6 337 aa13.07□□□□□ -0.32
SEC23B-202ENST00000336714 MNS1Q8NEH6 495 aa13.07□□□□□ -0.32
SEC23B-202ENST00000336714 PLEKHA4Q9H4M7 779 aa13.07□□□□□ -0.32
SEC23B-202ENST00000336714 ZSWIM4Q9H7M6 989 aa13.07□□□□□ -0.32
SEC23B-202ENST00000336714 MTMR6Q9Y217 621 aa13.07□□□□□ -0.32
SEC23B-202ENST00000336714 IL16Q14005 1332 aa13.07□□□□□ -0.32
SEC23B-202ENST00000336714 DDX11Q96FC9 970 aa13.07□□□□□ -0.32
SEC23B-202ENST00000336714 ERBB3P21860 1342 aa13.06□□□□□ -0.32
SEC23B-202ENST00000336714 URI1O94763 535 aaPredicted RBP13.06□□□□□ -0.32
SEC23B-202ENST00000336714 RPAP2Q8IXW5 612 aaPredicted RBP13.06□□□□□ -0.32
SEC23B-202ENST00000336714 SPATA32Q96LK8 384 aa13.06□□□□□ -0.32
SEC23B-202ENST00000336714 DNAI1Q9UI46 699 aa13.06□□□□□ -0.32
SEC23B-202ENST00000336714 MINK1Q8N4C8 1332 aaPredicted RBP13.06□□□□□ -0.32
SEC23B-202ENST00000336714 KRT85P78386 507 aa13.06□□□□□ -0.32
SEC23B-202ENST00000336714 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
SEC23B-202ENST00000336714 LIMCH1Q9UPQ0 1083 aa13.06□□□□□ -0.32
SEC23B-202ENST00000336714 HMMRO75330 724 aa13.06□□□□□ -0.32
SEC23B-202ENST00000336714 TMEM87AQ8NBN3 555 aa13.06□□□□□ -0.32
SEC23B-202ENST00000336714 ARHGAP45Q92619 1136 aa13.06□□□□□ -0.32
SEC23B-202ENST00000336714 JAKMIP1Q96N16 626 aaKnown RBP13.06□□□□□ -0.32
SEC23B-202ENST00000336714 SLC52A1Q9NWF4 448 aa13.06□□□□□ -0.32
SEC23B-202ENST00000336714 LAMC1P11047 1609 aa13.05□□□□□ -0.32
SEC23B-202ENST00000336714 SYCP2Q9BX26 1530 aa13.05□□□□□ -0.32
SEC23B-202ENST00000336714 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
SEC23B-202ENST00000336714 CASQ1P31415 396 aa13.05□□□□□ -0.32
SEC23B-202ENST00000336714 TPM4P67936 248 aa13.05□□□□□ -0.32
SEC23B-202ENST00000336714 C11orf57Q6ZUT1 292 aaPredicted RBP13.05□□□□□ -0.32
SEC23B-202ENST00000336714 RGS12O14924 1447 aa13.05□□□□□ -0.32
SEC23B-202ENST00000336714 GPS2Q13227 327 aa13.04□□□□□ -0.32
SEC23B-202ENST00000336714 PLA2G4DQ86XP0 818 aa13.04□□□□□ -0.32
SEC23B-202ENST00000336714 SNX14Q9Y5W7 946 aa13.04□□□□□ -0.32
SEC23B-202ENST00000336714 CCDC171Q6TFL3 1326 aa13.04□□□□□ -0.32
SEC23B-202ENST00000336714 RNF17Q9BXT8 1623 aaKnown RBP13.04□□□□□ -0.32
SEC23B-202ENST00000336714 SMC2O95347 1197 aa13.04□□□□□ -0.32
SEC23B-202ENST00000336714 TXLNBQ8N3L3 684 aa13.04□□□□□ -0.32
SEC23B-202ENST00000336714 ZNF428Q96B54 188 aa13.04□□□□□ -0.32
SEC23B-202ENST00000336714 CEP152O94986 1710 aa13.04□□□□□ -0.32
SEC23B-202ENST00000336714 FYB1O15117 783 aa13.04□□□□□ -0.32
SEC23B-202ENST00000336714 NFE2L2Q16236 605 aa13.04□□□□□ -0.32
SEC23B-202ENST00000336714 LRRCC1Q9C099 1032 aa13.04□□□□□ -0.32
SEC23B-202ENST00000336714 RRP15Q9Y3B9 282 aaKnown RBP13.04□□□□□ -0.32
SEC23B-202ENST00000336714 IFIT2P09913 472 aaKnown RBP13.03□□□□□ -0.32
SEC23B-202ENST00000336714 CARD6Q9BX69 1037 aa13.03□□□□□ -0.32
SEC23B-202ENST00000336714 MADDQ8WXG6 1647 aa13.03□□□□□ -0.32
SEC23B-202ENST00000336714 PTPRCP08575 1304 aa13.03□□□□□ -0.32
SEC23B-202ENST00000336714 PHACTR2O75167 634 aa13.03□□□□□ -0.32
SEC23B-202ENST00000336714 NOP2P46087 812 aaKnown RBP13.03□□□□□ -0.32
SEC23B-202ENST00000336714 ADCK5Q3MIX3 580 aa13.03□□□□□ -0.32
SEC23B-202ENST00000336714 TTLL5Q6EMB2 1281 aa13.03□□□□□ -0.32
SEC23B-202ENST00000336714 PRPF40BQ6NWY9 871 aaKnown RBP13.03□□□□□ -0.32
SEC23B-202ENST00000336714 FOXR1Q6PIV2 292 aa13.03□□□□□ -0.32
SEC23B-202ENST00000336714 ARGLU1Q9NWB6 273 aaPredicted RBP13.03□□□□□ -0.32
SEC23B-202ENST00000336714 MED14O60244 1454 aa13.03□□□□□ -0.32
SEC23B-202ENST00000336714 MCM10Q7L590 875 aa13.03□□□□□ -0.32
SEC23B-202ENST00000336714 EMILIN1Q9Y6C2 1016 aa13.03□□□□□ -0.32
SEC23B-202ENST00000336714 PBRM1Q86U86 1689 aa13.02□□□□□ -0.32
SEC23B-202ENST00000336714 ATP10BO94823 1461 aa13.02□□□□□ -0.32
SEC23B-202ENST00000336714 PNMA6EA0A0J9YXQ4 647 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms