RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 PHF14O94880 888 aa26.69■■□□□ 1.86
MRPL40-201ENST00000333130 ADRA2BP18089 450 aa26.69■■□□□ 1.86
MRPL40-201ENST00000333130 EIF4A1P60842 406 aaKnown RBP26.68■■□□□ 1.86
MRPL40-201ENST00000333130 SLC16A10Q8TF71 515 aa26.68■■□□□ 1.86
MRPL40-201ENST00000333130 SALL2Q9Y467 1007 aaPredicted RBP26.68■■□□□ 1.86
MRPL40-201ENST00000333130 IL16Q14005 1332 aa26.67■■□□□ 1.86
MRPL40-201ENST00000333130 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.67■■□□□ 1.86
MRPL40-201ENST00000333130 RPS6KA4O75676 772 aa26.67■■□□□ 1.86
MRPL40-201ENST00000333130 ZNF853P0CG23 659 aa26.67■■□□□ 1.86
MRPL40-201ENST00000333130 NPM2Q86SE8 214 aaKnown RBP26.67■■□□□ 1.86
MRPL40-201ENST00000333130 WDR63Q8IWG1 891 aa26.67■■□□□ 1.86
MRPL40-201ENST00000333130 TRAPPC3LQ5T215 181 aa26.65■■□□□ 1.86
MRPL40-201ENST00000333130 LRP5O75197 1615 aa26.64■■□□□ 1.86
MRPL40-201ENST00000333130 C4AP0C0L4 1744 aa26.64■■□□□ 1.86
MRPL40-201ENST00000333130 COL23A1Q86Y22 540 aaPredicted RBP26.64■■□□□ 1.86
MRPL40-201ENST00000333130 MTFR1LQ9H019 292 aa26.64■■□□□ 1.86
MRPL40-201ENST00000333130 SPON1Q9HCB6 807 aa26.64■■□□□ 1.86
MRPL40-201ENST00000333130 GIGYF1O75420 1035 aaPredicted RBP26.63■■□□□ 1.85
MRPL40-201ENST00000333130 INTS5Q6P9B9 1019 aaKnown RBP26.63■■□□□ 1.85
MRPL40-201ENST00000333130 ZBTB7AO95365 584 aa26.62■■□□□ 1.85
MRPL40-201ENST00000333130 HNRNPUQ00839 825 aaKnown RBP eCLIP26.62■■□□□ 1.85
MRPL40-201ENST00000333130 PDGFDQ9GZP0 370 aaPredicted RBP26.62■■□□□ 1.85
MRPL40-201ENST00000333130 MBIPQ9NS73 344 aa26.62■■□□□ 1.85
MRPL40-201ENST00000333130 ZBTB1Q9Y2K1 713 aa26.62■■□□□ 1.85
MRPL40-201ENST00000333130 CANXP27824 592 aaKnown RBP26.61■■□□□ 1.85
MRPL40-201ENST00000333130 RFC4P35249 363 aa26.61■■□□□ 1.85
MRPL40-201ENST00000333130 USP16Q9Y5T5 823 aa26.6■■□□□ 1.85
MRPL40-201ENST00000333130 COL15A1P39059 1388 aa26.6■■□□□ 1.85
MRPL40-201ENST00000333130 SOS1Q07889 1333 aaPredicted RBP26.6■■□□□ 1.85
MRPL40-201ENST00000333130 A0A087WZG4 1122 aa26.58■■□□□ 1.85
MRPL40-201ENST00000333130 PRAMEF22A3QJZ6 481 aa26.58■■□□□ 1.85
MRPL40-201ENST00000333130 AMIGO3Q86WK7 504 aa26.58■■□□□ 1.85
MRPL40-201ENST00000333130 HOXB7P09629 217 aa26.58■■□□□ 1.84
MRPL40-201ENST00000333130 IL6STP40189 918 aaPredicted RBP26.58■■□□□ 1.84
MRPL40-201ENST00000333130 ARHGEF1Q92888 912 aaKnown RBP26.58■■□□□ 1.84
MRPL40-201ENST00000333130 ZNF330Q9Y3S2 320 aaPredicted RBP26.58■■□□□ 1.84
MRPL40-201ENST00000333130 A1BGP04217 495 aa26.57■■□□□ 1.84
MRPL40-201ENST00000333130 CHMP4AQ9BY43 222 aa26.57■■□□□ 1.84
MRPL40-201ENST00000333130 ZBED9Q6R2W3 1325 aa26.56■■□□□ 1.84
MRPL40-201ENST00000333130 ZPR1O75312 459 aa26.56■■□□□ 1.84
MRPL40-201ENST00000333130 POLD1P28340 1107 aa26.56■■□□□ 1.84
MRPL40-201ENST00000333130 MYH16Q9H6N6 1097 aa26.56■■□□□ 1.84
MRPL40-201ENST00000333130 SPINK5Q9NQ38 1064 aaPredicted RBP26.56■■□□□ 1.84
MRPL40-201ENST00000333130 ATF5Q9Y2D1 282 aaPredicted RBP26.56■■□□□ 1.84
MRPL40-201ENST00000333130 ERBB4Q15303 1308 aa26.55■■□□□ 1.84
MRPL40-201ENST00000333130 COL24A1Q17RW2 1714 aa26.55■■□□□ 1.84
MRPL40-201ENST00000333130 GOLGA2Q08379 1002 aa26.55■■□□□ 1.84
MRPL40-201ENST00000333130 SMIM5Q71RC9 77 aa26.55■■□□□ 1.84
MRPL40-201ENST00000333130 FANCIQ9NVI1 1328 aa26.54■■□□□ 1.84
MRPL40-201ENST00000333130 EIF2S2P20042 333 aaKnown RBP26.53■■□□□ 1.84
MRPL40-201ENST00000333130 EIF5P55010 431 aaKnown RBP26.53■■□□□ 1.84
MRPL40-201ENST00000333130 PPP1R1BQ9UD71 204 aaPredicted RBP26.53■■□□□ 1.84
MRPL40-201ENST00000333130 DUSP27Q5VZP5 1158 aa26.52■■□□□ 1.84
MRPL40-201ENST00000333130 TSR2Q969E8 191 aaKnown RBP26.52■■□□□ 1.84
MRPL40-201ENST00000333130 USP42Q9H9J4 1324 aaKnown RBP26.52■■□□□ 1.84
MRPL40-201ENST00000333130 MSL1Q68DK7 614 aa26.51■■□□□ 1.83
MRPL40-201ENST00000333130 ARXQ96QS3 562 aa26.51■■□□□ 1.83
MRPL40-201ENST00000333130 SCN7AQ01118 1682 aa26.5■■□□□ 1.83
MRPL40-201ENST00000333130 E9PSI1 815 aa26.5■■□□□ 1.83
MRPL40-201ENST00000333130 KRT24Q2M2I5 525 aa26.5■■□□□ 1.83
MRPL40-201ENST00000333130 HDGFL1Q5TGJ6 251 aa26.5■■□□□ 1.83
MRPL40-201ENST00000333130 NLGN1Q8N2Q7 840 aa26.5■■□□□ 1.83
MRPL40-201ENST00000333130 NARFQ9UHQ1 456 aa26.5■■□□□ 1.83
MRPL40-201ENST00000333130 SLFN5Q08AF3 891 aa26.49■■□□□ 1.83
MRPL40-201ENST00000333130 PIP4K2AP48426 406 aaPredicted RBP26.48■■□□□ 1.83
MRPL40-201ENST00000333130 BCORQ6W2J9 1755 aa26.48■■□□□ 1.83
MRPL40-201ENST00000333130 TRMT2AQ8IZ69 625 aaKnown RBP26.48■■□□□ 1.83
MRPL40-201ENST00000333130 CDCA7LQ96GN5 454 aa26.47■■□□□ 1.83
MRPL40-201ENST00000333130 SRCAPQ6ZRS2 3230 aa26.47■■□□□ 1.83
MRPL40-201ENST00000333130 NBPF26B4DH59 902 aa26.46■■□□□ 1.83
MRPL40-201ENST00000333130 GYS1P13807 737 aa26.46■■□□□ 1.83
MRPL40-201ENST00000333130 MYL6BP14649 208 aa26.46■■□□□ 1.83
MRPL40-201ENST00000333130 NBPF10Q6P3W6 841 aaKnown RBP26.46■■□□□ 1.83
MRPL40-201ENST00000333130 DZIP3Q86Y13 1208 aaKnown RBP26.46■■□□□ 1.83
MRPL40-201ENST00000333130 NBPF15Q8N660 670 aa26.46■■□□□ 1.83
MRPL40-201ENST00000333130 SRP68Q9UHB9 627 aaKnown RBP26.46■■□□□ 1.83
MRPL40-201ENST00000333130 PTGER2P43116 358 aa26.46■■□□□ 1.83
MRPL40-201ENST00000333130 USPL1Q5W0Q7 1092 aa26.46■■□□□ 1.83
MRPL40-201ENST00000333130 NECTIN2Q92692 538 aa26.46■■□□□ 1.83
MRPL40-201ENST00000333130 ELL2O00472 640 aaPredicted RBP26.45■■□□□ 1.82
MRPL40-201ENST00000333130 KIF6Q6ZMV9 814 aa26.45■■□□□ 1.82
MRPL40-201ENST00000333130 TBC1D2BQ9UPU7 963 aa26.45■■□□□ 1.82
MRPL40-201ENST00000333130 ZNF652Q9Y2D9 606 aa26.45■■□□□ 1.82
MRPL40-201ENST00000333130 TWISTNBQ3B726 338 aaPredicted RBP26.44■■□□□ 1.82
MRPL40-201ENST00000333130 C8orf58Q8NAV2 365 aa26.44■■□□□ 1.82
MRPL40-201ENST00000333130 SGIP1Q9BQI5 828 aa26.44■■□□□ 1.82
MRPL40-201ENST00000333130 DBF4Q9UBU7 674 aaPredicted RBP26.44■■□□□ 1.82
MRPL40-201ENST00000333130 CACNA1FO60840 1977 aa26.43■■□□□ 1.82
MRPL40-201ENST00000333130 CCDC30Q5VVM6 783 aa26.43■■□□□ 1.82
MRPL40-201ENST00000333130 DDX21Q9NR30 783 aaKnown RBP eCLIP26.43■■□□□ 1.82
MRPL40-201ENST00000333130 MMP10P09238 476 aa26.41■■□□□ 1.82
MRPL40-201ENST00000333130 CHPF2Q9P2E5 772 aa26.41■■□□□ 1.82
MRPL40-201ENST00000333130 RGL2O15211 777 aa26.4■■□□□ 1.82
MRPL40-201ENST00000333130 FKBP8Q14318 412 aa26.4■■□□□ 1.82
MRPL40-201ENST00000333130 TSPYL6Q8N831 410 aa26.4■■□□□ 1.82
MRPL40-201ENST00000333130 STK31Q9BXU1 1019 aa26.4■■□□□ 1.82
MRPL40-201ENST00000333130 PARP3Q9Y6F1 533 aa26.4■■□□□ 1.82
MRPL40-201ENST00000333130 EXOSC9Q06265 439 aaKnown RBP26.39■■□□□ 1.82
MRPL40-201ENST00000333130 HYPKQ9NX55 129 aa26.39■■□□□ 1.82
MRPL40-201ENST00000333130 CAMTA2O94983 1202 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 282.4 ms