RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 PRDM11Q9NQV5 511 aa8.95□□□□□ -0.98
SMG1-201ENST00000330588 CABP1Q9NZU7 370 aa8.95□□□□□ -0.98
SMG1-201ENST00000330588 ABTB2Q8N961 1025 aa8.94□□□□□ -0.98
SMG1-201ENST00000330588 TMUB1Q9BVT8 246 aa8.94□□□□□ -0.98
SMG1-201ENST00000330588 SPATA31A5Q5VU36 1347 aa8.93□□□□□ -0.98
SMG1-201ENST00000330588 SPATA31A7Q8IWB4 1347 aa8.93□□□□□ -0.98
SMG1-201ENST00000330588 USP31Q70CQ4 1352 aa8.93□□□□□ -0.98
SMG1-201ENST00000330588 KIAA0232Q92628 1395 aa8.93□□□□□ -0.98
SMG1-201ENST00000330588 BRWD3Q6RI45 1802 aa8.93□□□□□ -0.98
SMG1-201ENST00000330588 NRG2O14511 850 aaPredicted RBP8.93□□□□□ -0.98
SMG1-201ENST00000330588 BTG4Q9NY30 223 aa8.93□□□□□ -0.98
SMG1-201ENST00000330588 AATKQ6ZMQ8 1374 aa8.93□□□□□ -0.98
SMG1-201ENST00000330588 BLMP54132 1417 aaPredicted RBP8.92□□□□□ -0.98
SMG1-201ENST00000330588 EDC4Q6P2E9 1401 aaKnown RBP8.92□□□□□ -0.98
SMG1-201ENST00000330588 CD163L1Q9NR16 1453 aa8.92□□□□□ -0.98
SMG1-201ENST00000330588 GCP02774 474 aa8.92□□□□□ -0.98
SMG1-201ENST00000330588 TESK2Q96S53 571 aa8.92□□□□□ -0.98
SMG1-201ENST00000330588 DAXXQ9UER7 740 aaPredicted RBP8.92□□□□□ -0.98
SMG1-201ENST00000330588 TTC21BQ7Z4L5 1316 aa8.92□□□□□ -0.98
SMG1-201ENST00000330588 COL18A1P39060 1754 aa8.91□□□□□ -0.98
SMG1-201ENST00000330588 SEMA3EO15041 775 aa8.91□□□□□ -0.98
SMG1-201ENST00000330588 GGCXP38435 758 aa8.91□□□□□ -0.98
SMG1-201ENST00000330588 BARGINQ6ZT62 677 aa8.91□□□□□ -0.98
SMG1-201ENST00000330588 KCNH5Q8NCM2 988 aa8.91□□□□□ -0.98
SMG1-201ENST00000330588 THRAP3Q9Y2W1 955 aaKnown RBP8.91□□□□□ -0.98
SMG1-201ENST00000330588 PCDHB3Q9Y5E6 796 aa8.91□□□□□ -0.98
SMG1-201ENST00000330588 CAMTA1Q9Y6Y1 1673 aa8.91□□□□□ -0.98
SMG1-201ENST00000330588 KTN1Q86UP2 1357 aaKnown RBP8.91□□□□□ -0.98
SMG1-201ENST00000330588 COL5A2P05997 1499 aaPredicted RBP8.91□□□□□ -0.98
SMG1-201ENST00000330588 NFAT5O94916 1531 aa8.91□□□□□ -0.98
SMG1-201ENST00000330588 RCCD1A6NED2 376 aa8.9□□□□□ -0.98
SMG1-201ENST00000330588 SEPT12Q8IYM1 358 aa8.9□□□□□ -0.98
SMG1-201ENST00000330588 TERF2IPQ9NYB0 399 aa8.9□□□□□ -0.98
SMG1-201ENST00000330588 SPATA31A1Q5TZJ5 1347 aa8.9□□□□□ -0.98
SMG1-201ENST00000330588 PARP4Q9UKK3 1724 aaKnown RBP8.9□□□□□ -0.99
SMG1-201ENST00000330588 C11orf95C9JLR9 678 aaPredicted RBP8.9□□□□□ -0.99
SMG1-201ENST00000330588 FCHSD2O94868 740 aa8.9□□□□□ -0.99
SMG1-201ENST00000330588 TRAF7Q6Q0C0 670 aa8.9□□□□□ -0.99
SMG1-201ENST00000330588 BLOC1S3Q6QNY0 202 aa8.9□□□□□ -0.99
SMG1-201ENST00000330588 HDGFL2Q7Z4V5 671 aaPredicted RBP8.9□□□□□ -0.99
SMG1-201ENST00000330588 ACTN4O43707 911 aaKnown RBP8.89□□□□□ -0.99
SMG1-201ENST00000330588 CDCA8Q53HL2 280 aa8.89□□□□□ -0.99
SMG1-201ENST00000330588 KRT27Q7Z3Y8 459 aa8.89□□□□□ -0.99
SMG1-201ENST00000330588 USP47Q96K76 1375 aa8.89□□□□□ -0.99
SMG1-201ENST00000330588 DISP2A7MBM2 1401 aa8.89□□□□□ -0.99
SMG1-201ENST00000330588 CRB1P82279 1406 aa8.89□□□□□ -0.99
SMG1-201ENST00000330588 RGPD1P0DJD0 1748 aa8.89□□□□□ -0.99
SMG1-201ENST00000330588 TESPA1A2RU30 521 aaPredicted RBP8.88□□□□□ -0.99
SMG1-201ENST00000330588 FAM161AQ3B820 660 aa8.88□□□□□ -0.99
SMG1-201ENST00000330588 ARHGEF25Q86VW2 580 aa8.88□□□□□ -0.99
SMG1-201ENST00000330588 CCDC9Q9Y3X0 531 aaKnown RBP8.88□□□□□ -0.99
SMG1-201ENST00000330588 WNK3Q9BYP7 1800 aa8.87□□□□□ -0.99
SMG1-201ENST00000330588 OVOS2A0A0J9YW53 1432 aa8.87□□□□□ -0.99
SMG1-201ENST00000330588 OVOS2Q6IE36 1432 aa8.87□□□□□ -0.99
SMG1-201ENST00000330588 A0A1W2PP64 1363 aa8.87□□□□□ -0.99
SMG1-201ENST00000330588 ANKRD36BQ8N2N9 1353 aa8.87□□□□□ -0.99
SMG1-201ENST00000330588 ST20-MTHFSA0A0A6YYL1 179 aa8.87□□□□□ -0.99
SMG1-201ENST00000330588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.87□□□□□ -0.99
SMG1-201ENST00000330588 ZC3H6P61129 1189 aaKnown RBP8.87□□□□□ -0.99
SMG1-201ENST00000330588 TMF1P82094 1093 aa8.87□□□□□ -0.99
SMG1-201ENST00000330588 NUTM2GQ5VZR2 741 aa8.87□□□□□ -0.99
SMG1-201ENST00000330588 SLC10A3P09131 477 aa8.86□□□□□ -0.99
SMG1-201ENST00000330588 CHRNA2Q15822 529 aa8.86□□□□□ -0.99
SMG1-201ENST00000330588 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.86□□□□□ -0.99
SMG1-201ENST00000330588 TCP11L2Q8N4U5 519 aa8.86□□□□□ -0.99
SMG1-201ENST00000330588 PXYLP1Q8TE99 480 aa8.86□□□□□ -0.99
SMG1-201ENST00000330588 EMID1Q96A84 441 aaPredicted RBP8.86□□□□□ -0.99
SMG1-201ENST00000330588 CDCA7Q9BWT1 371 aaPredicted RBP8.86□□□□□ -0.99
SMG1-201ENST00000330588 FAM208AQ9UK61 1670 aaKnown RBP8.86□□□□□ -0.99
SMG1-201ENST00000330588 BCL9O00512 1426 aa8.86□□□□□ -0.99
SMG1-201ENST00000330588 RNF223E7ERA6 249 aa8.86□□□□□ -0.99
SMG1-201ENST00000330588 EVA1CP58658 441 aa8.86□□□□□ -0.99
SMG1-201ENST00000330588 KMT5BQ4FZB7 885 aa8.86□□□□□ -0.99
SMG1-201ENST00000330588 TNS1Q9HBL0 1735 aaKnown RBP8.85□□□□□ -0.99
SMG1-201ENST00000330588 WDR17Q8IZU2 1322 aa8.85□□□□□ -0.99
SMG1-201ENST00000330588 CFHP08603 1231 aa8.85□□□□□ -0.99
SMG1-201ENST00000330588 SF3B2Q13435 895 aaKnown RBP8.85□□□□□ -0.99
SMG1-201ENST00000330588 SLC12A5Q9H2X9 1139 aa8.85□□□□□ -0.99
SMG1-201ENST00000330588 PARD3Q8TEW0 1356 aa8.84□□□□□ -0.99
SMG1-201ENST00000330588 CCDC7Q96M83 1385 aa8.84□□□□□ -0.99
SMG1-201ENST00000330588 MYOM1P52179 1685 aa8.84□□□□□ -0.99
SMG1-201ENST00000330588 TLL1O43897 1013 aa8.84□□□□□ -0.99
SMG1-201ENST00000330588 OATP04181 439 aa8.84□□□□□ -0.99
SMG1-201ENST00000330588 LARP1Q6PKG0 1096 aaKnown RBP8.84□□□□□ -0.99
SMG1-201ENST00000330588 FAM196AQ6ZSG2 479 aa8.84□□□□□ -0.99
SMG1-201ENST00000330588 PDZRN3Q9UPQ7 1066 aa8.84□□□□□ -0.99
SMG1-201ENST00000330588 RGPD3A6NKT7 1758 aaPredicted RBP8.84□□□□□ -0.99
SMG1-201ENST00000330588 LTN1O94822 1766 aa8.84□□□□□ -0.99
SMG1-201ENST00000330588 RGPD4Q7Z3J3 1758 aa8.84□□□□□ -0.99
SMG1-201ENST00000330588 LRRC37A3O60309 1634 aa8.84□□□□□ -1
SMG1-201ENST00000330588 HIC1Q14526 733 aa8.83□□□□□ -1
SMG1-201ENST00000330588 STRN4Q9NRL3 753 aa8.83□□□□□ -1
SMG1-201ENST00000330588 PEAK1Q9H792 1746 aa8.83□□□□□ -1
SMG1-201ENST00000330588 RTL1A6NKG5 1358 aa8.83□□□□□ -1
SMG1-201ENST00000330588 KIF24Q5T7B8 1368 aa8.83□□□□□ -1
SMG1-201ENST00000330588 BAG6P46379 1132 aa8.82□□□□□ -1
SMG1-201ENST00000330588 TRIM67Q6ZTA4 783 aa8.82□□□□□ -1
SMG1-201ENST00000330588 ANKLE1Q8NAG6 615 aa8.82□□□□□ -1
SMG1-201ENST00000330588 TMC1Q8TDI8 760 aa8.82□□□□□ -1
SMG1-201ENST00000330588 CARD10Q9BWT7 1032 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms