RNA–Protein interactions for RNA: ENST00000329305.6

TPM2-201, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM2, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-201ENST00000329305 AMIGO3Q86WK7 504 aa21.52■■□□□ 1.04
TPM2-201ENST00000329305 UBR3Q6ZT12 1888 aa21.52■■□□□ 1.03
TPM2-201ENST00000329305 LRP5O75197 1615 aa21.51■■□□□ 1.03
TPM2-201ENST00000329305 EIF4A1P60842 406 aaKnown RBP21.51■■□□□ 1.03
TPM2-201ENST00000329305 KDM3BQ7LBC6 1761 aa21.51■■□□□ 1.03
TPM2-201ENST00000329305 CHL1O00533 1208 aa21.5■■□□□ 1.03
TPM2-201ENST00000329305 RFC4P35249 363 aa21.5■■□□□ 1.03
TPM2-201ENST00000329305 SMIM5Q71RC9 77 aa21.5■■□□□ 1.03
TPM2-201ENST00000329305 NPM2Q86SE8 214 aaKnown RBP21.5■■□□□ 1.03
TPM2-201ENST00000329305 MIER1Q8N108 512 aa21.5■■□□□ 1.03
TPM2-201ENST00000329305 CFAP44Q96MT7 982 aa21.5■■□□□ 1.03
TPM2-201ENST00000329305 PPP1R1BQ9UD71 204 aaPredicted RBP21.5■■□□□ 1.03
TPM2-201ENST00000329305 ZBTB1Q9Y2K1 713 aa21.5■■□□□ 1.03
TPM2-201ENST00000329305 SENP3-EIF4A1A0A087X0R7 540 aa21.49■■□□□ 1.03
TPM2-201ENST00000329305 CANXP27824 592 aaKnown RBP21.49■■□□□ 1.03
TPM2-201ENST00000329305 POLD1P28340 1107 aa21.49■■□□□ 1.03
TPM2-201ENST00000329305 GNAI1P63096 354 aa21.49■■□□□ 1.03
TPM2-201ENST00000329305 NGEFQ8N5V2 710 aa21.49■■□□□ 1.03
TPM2-201ENST00000329305 ARHGEF1Q92888 912 aaKnown RBP21.49■■□□□ 1.03
TPM2-201ENST00000329305 IFT57Q9NWB7 429 aa21.49■■□□□ 1.03
TPM2-201ENST00000329305 USP16Q9Y5T5 823 aa21.49■■□□□ 1.03
TPM2-201ENST00000329305 WWC1Q8IX03 1113 aa21.48■■□□□ 1.03
TPM2-201ENST00000329305 SOS1Q07889 1333 aaPredicted RBP21.48■■□□□ 1.03
TPM2-201ENST00000329305 PRAMEF22A3QJZ6 481 aa21.47■■□□□ 1.03
TPM2-201ENST00000329305 GIGYF1O75420 1035 aaPredicted RBP21.47■■□□□ 1.03
TPM2-201ENST00000329305 SALL2Q9Y467 1007 aaPredicted RBP21.47■■□□□ 1.03
TPM2-201ENST00000329305 MSL1Q68DK7 614 aa21.46■■□□□ 1.03
TPM2-201ENST00000329305 ZNF330Q9Y3S2 320 aaPredicted RBP21.46■■□□□ 1.03
TPM2-201ENST00000329305 COL15A1P39059 1388 aa21.46■■□□□ 1.03
TPM2-201ENST00000329305 MYH14Q7Z406 1995 aaKnown RBP21.45■■□□□ 1.02
TPM2-201ENST00000329305 A0A087WZG4 1122 aa21.45■■□□□ 1.02
TPM2-201ENST00000329305 A1BGP04217 495 aa21.45■■□□□ 1.02
TPM2-201ENST00000329305 IL6STP40189 918 aaPredicted RBP21.45■■□□□ 1.02
TPM2-201ENST00000329305 PTGER2P43116 358 aa21.45■■□□□ 1.02
TPM2-201ENST00000329305 ZPR1O75312 459 aa21.44■■□□□ 1.02
TPM2-201ENST00000329305 MBIPQ9NS73 344 aa21.44■■□□□ 1.02
TPM2-201ENST00000329305 ZNF853P0CG23 659 aa21.43■■□□□ 1.02
TPM2-201ENST00000329305 SGIP1Q9BQI5 828 aa21.43■■□□□ 1.02
TPM2-201ENST00000329305 EIF5P55010 431 aaKnown RBP21.42■■□□□ 1.02
TPM2-201ENST00000329305 IL16Q14005 1332 aa21.42■■□□□ 1.02
TPM2-201ENST00000329305 NLGN1Q8N2Q7 840 aa21.42■■□□□ 1.02
TPM2-201ENST00000329305 USP42Q9H9J4 1324 aaKnown RBP21.42■■□□□ 1.02
TPM2-201ENST00000329305 WDR63Q8IWG1 891 aa21.41■■□□□ 1.02
TPM2-201ENST00000329305 ARXQ96QS3 562 aa21.41■■□□□ 1.02
TPM2-201ENST00000329305 GYS1P13807 737 aa21.4■■□□□ 1.02
TPM2-201ENST00000329305 SRP68Q9UHB9 627 aaKnown RBP21.4■■□□□ 1.02
TPM2-201ENST00000329305 NARFQ9UHQ1 456 aa21.4■■□□□ 1.02
TPM2-201ENST00000329305 LAMB4A4D0S4 1761 aa21.4■■□□□ 1.02
TPM2-201ENST00000329305 ERBB4Q15303 1308 aa21.39■■□□□ 1.01
TPM2-201ENST00000329305 HOXB7P09629 217 aa21.39■■□□□ 1.01
TPM2-201ENST00000329305 EIF2S2P20042 333 aaKnown RBP21.39■■□□□ 1.01
TPM2-201ENST00000329305 PIP4K2AP48426 406 aaPredicted RBP21.39■■□□□ 1.01
TPM2-201ENST00000329305 C4AP0C0L4 1744 aa21.38■■□□□ 1.01
TPM2-201ENST00000329305 USPL1Q5W0Q7 1092 aa21.38■■□□□ 1.01
TPM2-201ENST00000329305 KRT24Q2M2I5 525 aa21.37■■□□□ 1.01
TPM2-201ENST00000329305 DZIP3Q86Y13 1208 aaKnown RBP21.37■■□□□ 1.01
TPM2-201ENST00000329305 SRCAPQ6ZRS2 3230 aa21.36■■□□□ 1.01
TPM2-201ENST00000329305 NBPF26B4DH59 902 aa21.36■■□□□ 1.01
TPM2-201ENST00000329305 DUSP27Q5VZP5 1158 aa21.36■■□□□ 1.01
TPM2-201ENST00000329305 NBPF10Q6P3W6 841 aaKnown RBP21.36■■□□□ 1.01
TPM2-201ENST00000329305 NBPF15Q8N660 670 aa21.36■■□□□ 1.01
TPM2-201ENST00000329305 TBC1D2BQ9UPU7 963 aa21.36■■□□□ 1.01
TPM2-201ENST00000329305 COL24A1Q17RW2 1714 aa21.35■■□□□ 1.01
TPM2-201ENST00000329305 MMP10P09238 476 aa21.35■■□□□ 1.01
TPM2-201ENST00000329305 MYL6BP14649 208 aa21.35■■□□□ 1.01
TPM2-201ENST00000329305 HDGFL1Q5TGJ6 251 aa21.35■■□□□ 1.01
TPM2-201ENST00000329305 TSR2Q969E8 191 aaKnown RBP21.35■■□□□ 1.01
TPM2-201ENST00000329305 CHMP4AQ9BY43 222 aa21.35■■□□□ 1.01
TPM2-201ENST00000329305 FKBP8Q14318 412 aa21.34■■□□□ 1.01
TPM2-201ENST00000329305 KLHL34Q8N239 644 aa21.34■■□□□ 1.01
TPM2-201ENST00000329305 NECTIN2Q92692 538 aa21.34■■□□□ 1.01
TPM2-201ENST00000329305 MYH16Q9H6N6 1097 aa21.34■■□□□ 1.01
TPM2-201ENST00000329305 PARP3Q9Y6F1 533 aa21.34■■□□□ 1.01
TPM2-201ENST00000329305 FHDC1Q9C0D6 1143 aaPredicted RBP21.33■■□□□ 1.01
TPM2-201ENST00000329305 ELL2O00472 640 aaPredicted RBP21.32■■□□□ 1
TPM2-201ENST00000329305 ZNF652Q9Y2D9 606 aa21.32■■□□□ 1
TPM2-201ENST00000329305 FANCIQ9NVI1 1328 aa21.31■■□□□ 1
TPM2-201ENST00000329305 CAMTA2O94983 1202 aa21.31■■□□□ 1
TPM2-201ENST00000329305 GOLGA2Q08379 1002 aa21.31■■□□□ 1
TPM2-201ENST00000329305 KIF6Q6ZMV9 814 aa21.31■■□□□ 1
TPM2-201ENST00000329305 C8orf58Q8NAV2 365 aa21.3■■□□□ 1
TPM2-201ENST00000329305 BCL2L12Q9HB09 334 aa21.3■■□□□ 1
TPM2-201ENST00000329305 DDX21Q9NR30 783 aaKnown RBP eCLIP21.3■■□□□ 1
TPM2-201ENST00000329305 DBF4Q9UBU7 674 aaPredicted RBP21.3■■□□□ 1
TPM2-201ENST00000329305 ZNF521Q96K83 1311 aa21.29■■□□□ 1
TPM2-201ENST00000329305 PDIA6Q15084 440 aa21.29■■□□□ 1
TPM2-201ENST00000329305 CLEC4GQ6UXB4 293 aa21.29■■□□□ 1
TPM2-201ENST00000329305 SYT17Q9BSW7 474 aa21.29■■□□□ 1
TPM2-201ENST00000329305 SCN7AQ01118 1682 aa21.28■■□□□ 1
TPM2-201ENST00000329305 RGL2O15211 777 aa21.28■■□□□ 1
TPM2-201ENST00000329305 TM4SF1P30408 202 aa21.28■■□□□ 1
TPM2-201ENST00000329305 NFIXQ14938 502 aa21.28■■□□□ 1
TPM2-201ENST00000329305 TWISTNBQ3B726 338 aaPredicted RBP21.28■■□□□ 1
TPM2-201ENST00000329305 CHPF2Q9P2E5 772 aa21.28■■□□□ 1
TPM2-201ENST00000329305 CCDC30Q5VVM6 783 aa21.27■■□□□ 1
TPM2-201ENST00000329305 BICDL1Q6ZP65 573 aa21.27■■□□□ 1
TPM2-201ENST00000329305 CD2APQ9Y5K6 639 aa21.27■■□□□ 1
TPM2-201ENST00000329305 MAP3K15Q6ZN16 1313 aa21.27■□□□□ 0.99
TPM2-201ENST00000329305 ERVV-1B6SEH8 477 aa21.26■□□□□ 0.99
TPM2-201ENST00000329305 E9PSI1 815 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms