RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 RFC4P35249 363 aa26.07■■□□□ 1.76
HIGD1A-201ENST00000321331 ARHGEF1Q92888 912 aaKnown RBP26.07■■□□□ 1.76
HIGD1A-201ENST00000321331 MIS18AQ9NYP9 233 aa26.06■■□□□ 1.76
HIGD1A-201ENST00000321331 SNRPA1P09661 255 aaKnown RBP26.04■■□□□ 1.76
HIGD1A-201ENST00000321331 ZBTB1Q9Y2K1 713 aa26.04■■□□□ 1.76
HIGD1A-201ENST00000321331 SOS1Q07889 1333 aaPredicted RBP26.03■■□□□ 1.76
HIGD1A-201ENST00000321331 KDM3BQ7LBC6 1761 aa26.02■■□□□ 1.76
HIGD1A-201ENST00000321331 APAF1O14727 1248 aa26.02■■□□□ 1.76
HIGD1A-201ENST00000321331 FHDC1Q9C0D6 1143 aaPredicted RBP26.02■■□□□ 1.76
HIGD1A-201ENST00000321331 C4AP0C0L4 1744 aa26.01■■□□□ 1.75
HIGD1A-201ENST00000321331 CANXP27824 592 aaKnown RBP26.01■■□□□ 1.75
HIGD1A-201ENST00000321331 NLGN1Q8N2Q7 840 aa26.01■■□□□ 1.75
HIGD1A-201ENST00000321331 BABAM1Q9NWV8 329 aa26.01■■□□□ 1.75
HIGD1A-201ENST00000321331 TRIM35Q9UPQ4 493 aa26.01■■□□□ 1.75
HIGD1A-201ENST00000321331 TSPYL4Q9UJ04 414 aa26■■□□□ 1.75
HIGD1A-201ENST00000321331 COL15A1P39059 1388 aa25.98■■□□□ 1.75
HIGD1A-201ENST00000321331 USP42Q9H9J4 1324 aaKnown RBP25.98■■□□□ 1.75
HIGD1A-201ENST00000321331 KLHL34Q8N239 644 aa25.98■■□□□ 1.75
HIGD1A-201ENST00000321331 SYT17Q9BSW7 474 aa25.98■■□□□ 1.75
HIGD1A-201ENST00000321331 USP16Q9Y5T5 823 aa25.98■■□□□ 1.75
HIGD1A-201ENST00000321331 ZPR1O75312 459 aa25.97■■□□□ 1.75
HIGD1A-201ENST00000321331 GYS1P13807 737 aa25.97■■□□□ 1.75
HIGD1A-201ENST00000321331 EIF4A1P60842 406 aaKnown RBP25.97■■□□□ 1.75
HIGD1A-201ENST00000321331 NPM2Q86SE8 214 aaKnown RBP25.97■■□□□ 1.75
HIGD1A-201ENST00000321331 A0A087WZG4 1122 aa25.96■■□□□ 1.75
HIGD1A-201ENST00000321331 PRAMEF22A3QJZ6 481 aa25.96■■□□□ 1.75
HIGD1A-201ENST00000321331 IL6STP40189 918 aaPredicted RBP25.96■■□□□ 1.75
HIGD1A-201ENST00000321331 A1BGP04217 495 aa25.95■■□□□ 1.75
HIGD1A-201ENST00000321331 EIF5P55010 431 aaKnown RBP25.95■■□□□ 1.75
HIGD1A-201ENST00000321331 SRP68Q9UHB9 627 aaKnown RBP25.95■■□□□ 1.75
HIGD1A-201ENST00000321331 ZNF330Q9Y3S2 320 aaPredicted RBP25.95■■□□□ 1.74
HIGD1A-201ENST00000321331 GIGYF1O75420 1035 aaPredicted RBP25.94■■□□□ 1.74
HIGD1A-201ENST00000321331 MMP10P09238 476 aa25.94■■□□□ 1.74
HIGD1A-201ENST00000321331 CALD1Q05682 793 aaKnown RBP25.94■■□□□ 1.74
HIGD1A-201ENST00000321331 NARFQ9UHQ1 456 aa25.94■■□□□ 1.74
HIGD1A-201ENST00000321331 LAS1LQ9Y4W2 734 aaKnown RBP25.93■■□□□ 1.74
HIGD1A-201ENST00000321331 LAMB4A4D0S4 1761 aa25.92■■□□□ 1.74
HIGD1A-201ENST00000321331 DCAF8L1A6NGE4 600 aa25.92■■□□□ 1.74
HIGD1A-201ENST00000321331 USPL1Q5W0Q7 1092 aa25.92■■□□□ 1.74
HIGD1A-201ENST00000321331 CHL1O00533 1208 aa25.91■■□□□ 1.74
HIGD1A-201ENST00000321331 FKBP8Q14318 412 aa25.9■■□□□ 1.74
HIGD1A-201ENST00000321331 CD2APQ9Y5K6 639 aa25.9■■□□□ 1.74
HIGD1A-201ENST00000321331 FAM9BQ8IZU0 186 aa25.89■■□□□ 1.74
HIGD1A-201ENST00000321331 CFAP44Q96MT7 982 aa25.89■■□□□ 1.74
HIGD1A-201ENST00000321331 PARP3Q9Y6F1 533 aa25.89■■□□□ 1.74
HIGD1A-201ENST00000321331 PIP4K2AP48426 406 aaPredicted RBP25.87■■□□□ 1.73
HIGD1A-201ENST00000321331 CCDC27Q2M243 656 aa25.86■■□□□ 1.73
HIGD1A-201ENST00000321331 TBC1D2BQ9UPU7 963 aa25.86■■□□□ 1.73
HIGD1A-201ENST00000321331 NBPF26B4DH59 902 aa25.85■■□□□ 1.73
HIGD1A-201ENST00000321331 GNAI1P63096 354 aa25.85■■□□□ 1.73
HIGD1A-201ENST00000321331 NCBP3Q53F19 620 aaKnown RBP25.85■■□□□ 1.73
HIGD1A-201ENST00000321331 NBPF10Q6P3W6 841 aaKnown RBP25.85■■□□□ 1.73
HIGD1A-201ENST00000321331 NBPF15Q8N660 670 aa25.85■■□□□ 1.73
HIGD1A-201ENST00000321331 IFT57Q9NWB7 429 aa25.85■■□□□ 1.73
HIGD1A-201ENST00000321331 DZIP3Q86Y13 1208 aaKnown RBP25.84■■□□□ 1.73
HIGD1A-201ENST00000321331 BCL2L12Q9HB09 334 aa25.84■■□□□ 1.73
HIGD1A-201ENST00000321331 NLGN2Q8NFZ4 835 aa25.83■■□□□ 1.73
HIGD1A-201ENST00000321331 ZNF853P0CG23 659 aa25.82■■□□□ 1.72
HIGD1A-201ENST00000321331 TM4SF1P30408 202 aa25.82■■□□□ 1.72
HIGD1A-201ENST00000321331 ERBB4Q15303 1308 aa25.82■■□□□ 1.72
HIGD1A-201ENST00000321331 SCN7AQ01118 1682 aa25.82■■□□□ 1.72
HIGD1A-201ENST00000321331 SENP3-EIF4A1A0A087X0R7 540 aa25.82■■□□□ 1.72
HIGD1A-201ENST00000321331 DDR1Q08345 913 aa25.82■■□□□ 1.72
HIGD1A-201ENST00000321331 MBIPQ9NS73 344 aa25.82■■□□□ 1.72
HIGD1A-201ENST00000321331 CAMTA2O94983 1202 aa25.81■■□□□ 1.72
HIGD1A-201ENST00000321331 EIF2S2P20042 333 aaKnown RBP25.81■■□□□ 1.72
HIGD1A-201ENST00000321331 NFIXQ14938 502 aa25.81■■□□□ 1.72
HIGD1A-201ENST00000321331 WWC1Q8IX03 1113 aa25.81■■□□□ 1.72
HIGD1A-201ENST00000321331 CCER2I3L3R5 266 aa25.8■■□□□ 1.72
HIGD1A-201ENST00000321331 POLRMTO00411 1230 aaKnown RBP25.8■■□□□ 1.72
HIGD1A-201ENST00000321331 ZNF652Q9Y2D9 606 aa25.79■■□□□ 1.72
HIGD1A-201ENST00000321331 HOXB7P09629 217 aa25.78■■□□□ 1.72
HIGD1A-201ENST00000321331 MYL6BP14649 208 aa25.78■■□□□ 1.72
HIGD1A-201ENST00000321331 DIEXFQ68CQ4 756 aaKnown RBP25.78■■□□□ 1.72
HIGD1A-201ENST00000321331 BICDL1Q6ZP65 573 aa25.78■■□□□ 1.72
HIGD1A-201ENST00000321331 C10orf71Q711Q0 1435 aa25.78■■□□□ 1.72
HIGD1A-201ENST00000321331 BCORQ6W2J9 1755 aa25.77■■□□□ 1.72
HIGD1A-201ENST00000321331 KRT24Q2M2I5 525 aa25.77■■□□□ 1.72
HIGD1A-201ENST00000321331 CLEC4GQ6UXB4 293 aa25.77■■□□□ 1.72
HIGD1A-201ENST00000321331 NGEFQ8N5V2 710 aa25.77■■□□□ 1.72
HIGD1A-201ENST00000321331 RGL2O15211 777 aa25.76■■□□□ 1.71
HIGD1A-201ENST00000321331 TBC1D9BQ66K14 1250 aa25.76■■□□□ 1.71
HIGD1A-201ENST00000321331 SALL2Q9Y467 1007 aaPredicted RBP25.76■■□□□ 1.71
HIGD1A-201ENST00000321331 KIF13BQ9NQT8 1826 aa25.76■■□□□ 1.71
HIGD1A-201ENST00000321331 IL16Q14005 1332 aa25.75■■□□□ 1.71
HIGD1A-201ENST00000321331 SERPINB2P05120 415 aa25.75■■□□□ 1.71
HIGD1A-201ENST00000321331 TGFB2P61812 414 aa25.75■■□□□ 1.71
HIGD1A-201ENST00000321331 GPR162Q16538 588 aa25.75■■□□□ 1.71
HIGD1A-201ENST00000321331 PELP1Q8IZL8 1130 aaKnown RBP25.75■■□□□ 1.71
HIGD1A-201ENST00000321331 DUSP27Q5VZP5 1158 aa25.74■■□□□ 1.71
HIGD1A-201ENST00000321331 KIF6Q6ZMV9 814 aa25.74■■□□□ 1.71
HIGD1A-201ENST00000321331 SETDB2Q96T68 719 aa25.74■■□□□ 1.71
HIGD1A-201ENST00000321331 HDGFL1Q5TGJ6 251 aa25.73■■□□□ 1.71
HIGD1A-201ENST00000321331 NECTIN2Q92692 538 aa25.73■■□□□ 1.71
HIGD1A-201ENST00000321331 CARMIL3Q8ND23 1372 aa25.73■■□□□ 1.71
HIGD1A-201ENST00000321331 PDIA6Q15084 440 aa25.72■■□□□ 1.71
HIGD1A-201ENST00000321331 WDR63Q8IWG1 891 aa25.72■■□□□ 1.71
HIGD1A-201ENST00000321331 AFDNP55196 1824 aaKnown RBP25.71■■□□□ 1.71
HIGD1A-201ENST00000321331 MAP3K15Q6ZN16 1313 aa25.71■■□□□ 1.71
HIGD1A-201ENST00000321331 ERVV-1B6SEH8 477 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms