RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 MRPL12P52815 198 aaKnown RBP10.91□□□□□ -0.66
BDNF-201ENST00000314915 TCP11Q8WWU5 503 aa10.91□□□□□ -0.66
BDNF-201ENST00000314915 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.91□□□□□ -0.66
BDNF-201ENST00000314915 CLCN6P51797 869 aa10.9□□□□□ -0.66
BDNF-201ENST00000314915 PDIA5Q14554 519 aa10.9□□□□□ -0.66
BDNF-201ENST00000314915 ZCRB1Q8TBF4 217 aaKnown RBP10.9□□□□□ -0.66
BDNF-201ENST00000314915 MICAL1Q8TDZ2 1067 aa10.9□□□□□ -0.66
BDNF-201ENST00000314915 KCNB2Q92953 911 aa10.9□□□□□ -0.66
BDNF-201ENST00000314915 KCNF1Q9H3M0 494 aa10.9□□□□□ -0.66
BDNF-201ENST00000314915 SUN2Q9UH99 717 aa10.9□□□□□ -0.66
BDNF-201ENST00000314915 CCDC171Q6TFL3 1326 aa10.9□□□□□ -0.66
BDNF-201ENST00000314915 ADAM21Q9UKJ8 722 aa10.9□□□□□ -0.66
BDNF-201ENST00000314915 SYNJ1O43426 1573 aa10.9□□□□□ -0.66
BDNF-201ENST00000314915 GCKP35557 465 aa10.9□□□□□ -0.66
BDNF-201ENST00000314915 RASA3Q14644 834 aa10.9□□□□□ -0.66
BDNF-201ENST00000314915 ZRANB2O95218 330 aaKnown RBP eCLIP10.9□□□□□ -0.67
BDNF-201ENST00000314915 OATP04181 439 aa10.9□□□□□ -0.67
BDNF-201ENST00000314915 CCNHP51946 323 aaPredicted RBP10.9□□□□□ -0.67
BDNF-201ENST00000314915 DDR1Q08345 913 aa10.9□□□□□ -0.67
BDNF-201ENST00000314915 NUTM2GQ5VZR2 741 aa10.9□□□□□ -0.67
BDNF-201ENST00000314915 ZNF280DQ6N043 979 aa10.9□□□□□ -0.67
BDNF-201ENST00000314915 REXO1L1PQ8IX06 675 aa10.9□□□□□ -0.67
BDNF-201ENST00000314915 JPH2Q9BR39 696 aaPredicted RBP10.9□□□□□ -0.67
BDNF-201ENST00000314915 UTP14AQ9BVJ6 771 aaKnown RBP10.9□□□□□ -0.67
BDNF-201ENST00000314915 SRRTQ9BXP5 876 aaKnown RBP10.9□□□□□ -0.67
BDNF-201ENST00000314915 ARHGAP35Q9NRY4 1499 aa10.89□□□□□ -0.67
BDNF-201ENST00000314915 AP1G2O75843 785 aa10.89□□□□□ -0.67
BDNF-201ENST00000314915 CYP2E1P05181 493 aaPredicted RBP10.89□□□□□ -0.67
BDNF-201ENST00000314915 SMC1AQ14683 1233 aaKnown RBP10.89□□□□□ -0.67
BDNF-201ENST00000314915 MYLK4Q86YV6 388 aaPredicted RBP10.89□□□□□ -0.67
BDNF-201ENST00000314915 FOXD4L1Q9NU39 408 aa10.89□□□□□ -0.67
BDNF-201ENST00000314915 PDZRN3Q9UPQ7 1066 aa10.89□□□□□ -0.67
BDNF-201ENST00000314915 RBM47A0AV96 593 aaKnown RBP10.88□□□□□ -0.67
BDNF-201ENST00000314915 RWDD1Q9H446 243 aaPredicted RBP10.88□□□□□ -0.67
BDNF-201ENST00000314915 ODF2LQ9ULJ1 636 aa10.88□□□□□ -0.67
BDNF-201ENST00000314915 GPTP24298 496 aa10.88□□□□□ -0.67
BDNF-201ENST00000314915 HOMER3Q9NSC5 361 aa10.88□□□□□ -0.67
BDNF-201ENST00000314915 ROCK1Q13464 1354 aa10.88□□□□□ -0.67
BDNF-201ENST00000314915 ANKRD30AQ9BXX3 1397 aa10.88□□□□□ -0.67
BDNF-201ENST00000314915 CHUKO15111 745 aa10.88□□□□□ -0.67
BDNF-201ENST00000314915 LRRC31Q6UY01 552 aa10.88□□□□□ -0.67
BDNF-201ENST00000314915 THUMPD2Q9BTF0 503 aaKnown RBP10.88□□□□□ -0.67
BDNF-201ENST00000314915 SCRN1Q12765 414 aa10.88□□□□□ -0.67
BDNF-201ENST00000314915 POTEDQ86YR6 584 aa10.88□□□□□ -0.67
BDNF-201ENST00000314915 YEATS2Q9ULM3 1422 aa10.88□□□□□ -0.67
BDNF-201ENST00000314915 SPATA31E1Q6ZUB1 1445 aa10.87□□□□□ -0.67
BDNF-201ENST00000314915 STK31Q9BXU1 1019 aa10.87□□□□□ -0.67
BDNF-201ENST00000314915 MYO6Q9UM54 1294 aa10.87□□□□□ -0.67
BDNF-201ENST00000314915 C17orf50Q8WW18 174 aa10.87□□□□□ -0.67
BDNF-201ENST00000314915 UBA5Q9GZZ9 404 aa10.87□□□□□ -0.67
BDNF-201ENST00000314915 RTN2O75298 545 aa10.87□□□□□ -0.67
BDNF-201ENST00000314915 CHMLP26374 656 aa10.87□□□□□ -0.67
BDNF-201ENST00000314915 DBN1Q16643 649 aa10.87□□□□□ -0.67
BDNF-201ENST00000314915 HSP90AB2PQ58FF8 381 aa10.87□□□□□ -0.67
BDNF-201ENST00000314915 PLEKHG4BQ96PX9 1271 aa10.87□□□□□ -0.67
BDNF-201ENST00000314915 EXOC6BQ9Y2D4 811 aa10.87□□□□□ -0.67
BDNF-201ENST00000314915 PTPN14Q15678 1187 aa10.86□□□□□ -0.67
BDNF-201ENST00000314915 GAS2L2Q8NHY3 880 aa10.86□□□□□ -0.67
BDNF-201ENST00000314915 MRFAP1L1Q96HT8 127 aa10.86□□□□□ -0.67
BDNF-201ENST00000314915 ACBD3Q9H3P7 528 aa10.86□□□□□ -0.67
BDNF-201ENST00000314915 FRMD4BQ9Y2L6 1034 aa10.86□□□□□ -0.67
BDNF-201ENST00000314915 CCDC178Q5BJE1 867 aa10.86□□□□□ -0.67
BDNF-201ENST00000314915 SAAL1Q96ER3 474 aa10.86□□□□□ -0.67
BDNF-201ENST00000314915 CABS1Q96KC9 395 aa10.86□□□□□ -0.67
BDNF-201ENST00000314915 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.86□□□□□ -0.67
BDNF-201ENST00000314915 SYNPO2Q9UMS6 1093 aa10.86□□□□□ -0.67
BDNF-201ENST00000314915 BLMP54132 1417 aaPredicted RBP10.86□□□□□ -0.67
BDNF-201ENST00000314915 FMN1Q68DA7 1419 aa10.86□□□□□ -0.67
BDNF-201ENST00000314915 PREPLQ4J6C6 727 aaPredicted RBP10.86□□□□□ -0.67
BDNF-201ENST00000314915 LRRC9Q6ZRR7 1453 aa10.86□□□□□ -0.67
BDNF-201ENST00000314915 CPLX2Q6PUV4 134 aaKnown RBP10.85□□□□□ -0.67
BDNF-201ENST00000314915 TDRD7Q8NHU6 1098 aaKnown RBP10.85□□□□□ -0.67
BDNF-201ENST00000314915 CXorf38Q8TB03 319 aa10.85□□□□□ -0.67
BDNF-201ENST00000314915 ARPC5LQ9BPX5 153 aa10.85□□□□□ -0.67
BDNF-201ENST00000314915 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.85□□□□□ -0.67
BDNF-201ENST00000314915 DUSP27Q5VZP5 1158 aa10.85□□□□□ -0.67
BDNF-201ENST00000314915 GET4Q7L5D6 327 aaPredicted RBP10.85□□□□□ -0.67
BDNF-201ENST00000314915 PPFIA4O75335 1185 aa10.85□□□□□ -0.67
BDNF-201ENST00000314915 CWC27Q6UX04 472 aaKnown RBP10.85□□□□□ -0.67
BDNF-201ENST00000314915 NAT1P18440 290 aa10.85□□□□□ -0.67
BDNF-201ENST00000314915 CASTP20810 708 aaKnown RBP10.85□□□□□ -0.67
BDNF-201ENST00000314915 CWC25Q9NXE8 425 aaPredicted RBP10.84□□□□□ -0.67
BDNF-201ENST00000314915 CLNS1AP54105 237 aaKnown RBP10.84□□□□□ -0.67
BDNF-201ENST00000314915 TRIM42Q8IWZ5 723 aa10.84□□□□□ -0.67
BDNF-201ENST00000314915 NECTIN2Q92692 538 aa10.84□□□□□ -0.67
BDNF-201ENST00000314915 AKAP2Q9Y2D5 859 aa10.84□□□□□ -0.67
BDNF-201ENST00000314915 RIPOR2Q9Y4F9 1068 aa10.84□□□□□ -0.67
BDNF-201ENST00000314915 POLA1P09884 1462 aaPredicted RBP10.84□□□□□ -0.67
BDNF-201ENST00000314915 THOC2Q8NI27 1593 aaKnown RBP10.84□□□□□ -0.67
BDNF-201ENST00000314915 TUBB4AP04350 444 aa10.84□□□□□ -0.67
BDNF-201ENST00000314915 FILIP1LQ4L180 1135 aa10.84□□□□□ -0.67
BDNF-201ENST00000314915 TAX1BP1Q86VP1 789 aa10.84□□□□□ -0.67
BDNF-201ENST00000314915 AGAP3Q96P47 875 aa10.84□□□□□ -0.67
BDNF-201ENST00000314915 MTA3Q9BTC8 594 aa10.84□□□□□ -0.67
BDNF-201ENST00000314915 NEXNQ0ZGT2 675 aa10.83□□□□□ -0.68
BDNF-201ENST00000314915 IQCA1Q86XH1 822 aa10.83□□□□□ -0.68
BDNF-201ENST00000314915 BICD1Q96G01 975 aa10.83□□□□□ -0.68
BDNF-201ENST00000314915 SMAPO00193 183 aa10.83□□□□□ -0.68
BDNF-201ENST00000314915 TPP2P29144 1249 aaPredicted RBP10.83□□□□□ -0.68
BDNF-201ENST00000314915 PEX19P40855 299 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms