RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 ATP6V1DQ9Y5K8 247 aa11.05□□□□□ -0.64
XCR1-201ENST00000309285 NEURL4Q96JN8 1562 aa11.05□□□□□ -0.64
XCR1-201ENST00000309285 FAM135BQ49AJ0 1406 aa11.05□□□□□ -0.64
XCR1-201ENST00000309285 ANXA1P04083 346 aa11.05□□□□□ -0.64
XCR1-201ENST00000309285 HSP90B2PQ58FF3 399 aa11.05□□□□□ -0.64
XCR1-201ENST00000309285 DEF6Q9H4E7 631 aa11.05□□□□□ -0.64
XCR1-201ENST00000309285 TBC1D9Q6ZT07 1266 aa11.04□□□□□ -0.64
XCR1-201ENST00000309285 KRT28Q7Z3Y7 464 aa11.04□□□□□ -0.64
XCR1-201ENST00000309285 LRRC59Q96AG4 307 aaKnown RBP11.04□□□□□ -0.64
XCR1-201ENST00000309285 TATP17735 454 aaPredicted RBP11.04□□□□□ -0.64
XCR1-201ENST00000309285 TSPY26PQ9H489 355 aa11.04□□□□□ -0.64
XCR1-201ENST00000309285 RRAGDQ9NQL2 400 aaPredicted RBP11.04□□□□□ -0.64
XCR1-201ENST00000309285 LEKR1Q6ZMV7 388 aa11.04□□□□□ -0.64
XCR1-201ENST00000309285 GPATCH11Q8N954 259 aa11.04□□□□□ -0.64
XCR1-201ENST00000309285 ARHGEF40Q8TER5 1519 aa11.04□□□□□ -0.64
XCR1-201ENST00000309285 XRCC6P12956 609 aaKnown RBP eCLIP11.04□□□□□ -0.64
XCR1-201ENST00000309285 AMOTL1Q8IY63 956 aa11.04□□□□□ -0.64
XCR1-201ENST00000309285 C16orf71Q8IYS4 520 aaPredicted RBP11.04□□□□□ -0.64
XCR1-201ENST00000309285 CCDC112Q8NEF3 446 aa11.04□□□□□ -0.64
XCR1-201ENST00000309285 RIMBP3CA6NJZ7 1639 aa11.04□□□□□ -0.64
XCR1-201ENST00000309285 RIMBP3BA6NNM3 1639 aa11.04□□□□□ -0.64
XCR1-201ENST00000309285 RIMBP3Q9UFD9 1639 aa11.04□□□□□ -0.64
XCR1-201ENST00000309285 HSP90AB4PQ58FF6 505 aa11.03□□□□□ -0.64
XCR1-201ENST00000309285 G2E3Q7L622 706 aa11.03□□□□□ -0.64
XCR1-201ENST00000309285 ANKRD44Q8N8A2 993 aa11.03□□□□□ -0.64
XCR1-201ENST00000309285 LRRFIP2Q9Y608 721 aaKnown RBP11.03□□□□□ -0.64
XCR1-201ENST00000309285 SBNO1A3KN83 1393 aa11.03□□□□□ -0.64
XCR1-201ENST00000309285 VGLL3A8MV65 326 aa11.03□□□□□ -0.64
XCR1-201ENST00000309285 RBM25P49756 843 aaKnown RBP11.03□□□□□ -0.64
XCR1-201ENST00000309285 CDR1P51861 262 aa11.03□□□□□ -0.64
XCR1-201ENST00000309285 TRDNQ13061 729 aa11.03□□□□□ -0.64
XCR1-201ENST00000309285 CLASRPQ8N2M8 674 aaKnown RBP11.03□□□□□ -0.64
XCR1-201ENST00000309285 ORAI2Q96SN7 254 aa11.03□□□□□ -0.64
XCR1-201ENST00000309285 PPLO60437 1756 aa11.03□□□□□ -0.64
XCR1-201ENST00000309285 MYL6BP14649 208 aa11.02□□□□□ -0.64
XCR1-201ENST00000309285 IRX3P78415 501 aaPredicted RBP11.02□□□□□ -0.64
XCR1-201ENST00000309285 IGSF3O75054 1194 aa11.02□□□□□ -0.65
XCR1-201ENST00000309285 RUFY2Q8WXA3 655 aa11.02□□□□□ -0.65
XCR1-201ENST00000309285 PNPLA6Q8IY17 1366 aa11.02□□□□□ -0.65
XCR1-201ENST00000309285 NEK4P51957 841 aa11.02□□□□□ -0.65
XCR1-201ENST00000309285 AMOTQ4VCS5 1084 aa11.02□□□□□ -0.65
XCR1-201ENST00000309285 RABEP1Q15276 862 aa11.02□□□□□ -0.65
XCR1-201ENST00000309285 LRRFIP1Q32MZ4 808 aaKnown RBP11.02□□□□□ -0.65
XCR1-201ENST00000309285 TSHZ3Q63HK5 1081 aa11.02□□□□□ -0.65
XCR1-201ENST00000309285 ANKRD24Q8TF21 1146 aa11.02□□□□□ -0.65
XCR1-201ENST00000309285 FBXO3Q9UK99 471 aa11.02□□□□□ -0.65
XCR1-201ENST00000309285 ERC2O15083 957 aa11.01□□□□□ -0.65
XCR1-201ENST00000309285 GCP02774 474 aa11.01□□□□□ -0.65
XCR1-201ENST00000309285 NFXL1Q6ZNB6 911 aa11.01□□□□□ -0.65
XCR1-201ENST00000309285 STRN4Q9NRL3 753 aa11.01□□□□□ -0.65
XCR1-201ENST00000309285 CALCOCO1Q9P1Z2 691 aa11.01□□□□□ -0.65
XCR1-201ENST00000309285 VPS37CA5D8V6 355 aaPredicted RBP11.01□□□□□ -0.65
XCR1-201ENST00000309285 KDM4AO75164 1064 aa11.01□□□□□ -0.65
XCR1-201ENST00000309285 TRIM29Q14134 588 aa11.01□□□□□ -0.65
XCR1-201ENST00000309285 TSR1Q2NL82 804 aaKnown RBP11.01□□□□□ -0.65
XCR1-201ENST00000309285 DCTPP1Q9H773 170 aa11.01□□□□□ -0.65
XCR1-201ENST00000309285 PPP1R1BQ9UD71 204 aaPredicted RBP11.01□□□□□ -0.65
XCR1-201ENST00000309285 CLTCQ00610 1675 aaKnown RBP11.01□□□□□ -0.65
XCR1-201ENST00000309285 USP6P35125 1406 aa11.01□□□□□ -0.65
XCR1-201ENST00000309285 PI4KAP2A4QPH2 592 aa11.01□□□□□ -0.65
XCR1-201ENST00000309285 PI4KAP1Q8N8J0 262 aa11.01□□□□□ -0.65
XCR1-201ENST00000309285 TRIM5Q9C035 493 aa11.01□□□□□ -0.65
XCR1-201ENST00000309285 MAP4K4O95819 1239 aaPredicted RBP11.01□□□□□ -0.65
XCR1-201ENST00000309285 WASHC4Q2M389 1173 aa11.01□□□□□ -0.65
XCR1-201ENST00000309285 CEP85Q6P2H3 762 aa11□□□□□ -0.65
XCR1-201ENST00000309285 PRDM11Q9NQV5 511 aa11□□□□□ -0.65
XCR1-201ENST00000309285 K7ELQ4 463 aaPredicted RBP11□□□□□ -0.65
XCR1-201ENST00000309285 DYNC1I1O14576 645 aa11□□□□□ -0.65
XCR1-201ENST00000309285 MBD3O95983 291 aa11□□□□□ -0.65
XCR1-201ENST00000309285 NUTM1Q86Y26 1132 aa11□□□□□ -0.65
XCR1-201ENST00000309285 TSPYL1Q9H0U9 437 aa11□□□□□ -0.65
XCR1-201ENST00000309285 NLRP1Q9C000 1473 aa11□□□□□ -0.65
XCR1-201ENST00000309285 ZNF853P0CG23 659 aa11□□□□□ -0.65
XCR1-201ENST00000309285 DNAAF4Q8WXU2 420 aa11□□□□□ -0.65
XCR1-201ENST00000309285 IP6K1Q92551 441 aa11□□□□□ -0.65
XCR1-201ENST00000309285 AK7Q96M32 723 aa11□□□□□ -0.65
XCR1-201ENST00000309285 PCMTD1Q96MG8 357 aaPredicted RBP11□□□□□ -0.65
XCR1-201ENST00000309285 SPG7Q9UQ90 795 aa11□□□□□ -0.65
XCR1-201ENST00000309285 PREX1Q8TCU6 1659 aa11□□□□□ -0.65
XCR1-201ENST00000309285 MX1P20591 662 aa11□□□□□ -0.65
XCR1-201ENST00000309285 CHRNA2Q15822 529 aa10.99□□□□□ -0.65
XCR1-201ENST00000309285 BICD2Q8TD16 824 aa10.99□□□□□ -0.65
XCR1-201ENST00000309285 IPO4Q8TEX9 1081 aaKnown RBP10.99□□□□□ -0.65
XCR1-201ENST00000309285 RBM42Q9BTD8 480 aaKnown RBP10.99□□□□□ -0.65
XCR1-201ENST00000309285 AGLP35573 1532 aa10.99□□□□□ -0.65
XCR1-201ENST00000309285 TTC22Q5TAA0 569 aa10.99□□□□□ -0.65
XCR1-201ENST00000309285 TOM1L2Q6ZVM7 507 aa10.99□□□□□ -0.65
XCR1-201ENST00000309285 SIL1Q9H173 461 aa10.99□□□□□ -0.65
XCR1-201ENST00000309285 CHPF2Q9P2E5 772 aa10.99□□□□□ -0.65
XCR1-201ENST00000309285 DBF4Q9UBU7 674 aaPredicted RBP10.99□□□□□ -0.65
XCR1-201ENST00000309285 DIP2BQ9P265 1576 aa10.99□□□□□ -0.65
XCR1-201ENST00000309285 ABCC4O15439 1325 aa10.99□□□□□ -0.65
XCR1-201ENST00000309285 PIK3R4Q99570 1358 aa10.98□□□□□ -0.65
XCR1-201ENST00000309285 CDK12Q9NYV4 1490 aaPredicted RBP10.98□□□□□ -0.65
XCR1-201ENST00000309285 TNNT1P13805 278 aa10.98□□□□□ -0.65
XCR1-201ENST00000309285 MAP3K5Q99683 1374 aa10.98□□□□□ -0.65
XCR1-201ENST00000309285 ZC3H13Q5T200 1668 aaKnown RBP10.98□□□□□ -0.65
XCR1-201ENST00000309285 ACBD3Q9H3P7 528 aa10.98□□□□□ -0.65
XCR1-201ENST00000309285 SDSP20132 328 aa10.98□□□□□ -0.65
XCR1-201ENST00000309285 CABP4P57796 275 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms