RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 PLEKHH1Q9ULM0 1364 aa23.74■■□□□ 1.39
MTCL1-201ENST00000306329 HMGB1P09429 215 aaKnown RBP23.73■■□□□ 1.39
MTCL1-201ENST00000306329 LIMCH1Q9UPQ0 1083 aa23.73■■□□□ 1.39
MTCL1-201ENST00000306329 POLR3GO15318 223 aaPredicted RBP23.73■■□□□ 1.39
MTCL1-201ENST00000306329 GIMAP7Q8NHV1 300 aa23.73■■□□□ 1.39
MTCL1-201ENST00000306329 CTNNBL1Q8WYA6 563 aaPredicted RBP23.73■■□□□ 1.39
MTCL1-201ENST00000306329 BCCIPQ9P287 314 aaKnown RBP eCLIP23.73■■□□□ 1.39
MTCL1-201ENST00000306329 CTAGE5O15320 804 aa23.73■■□□□ 1.39
MTCL1-201ENST00000306329 PAFAH1B1P43034 410 aa23.73■■□□□ 1.39
MTCL1-201ENST00000306329 ALDH1L2Q3SY69 923 aa23.73■■□□□ 1.39
MTCL1-201ENST00000306329 LARP6Q9BRS8 491 aaKnown RBP23.73■■□□□ 1.39
MTCL1-201ENST00000306329 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
MTCL1-201ENST00000306329 USO1O60763 962 aaKnown RBP23.73■■□□□ 1.39
MTCL1-201ENST00000306329 FSIP1Q8NA03 581 aa23.73■■□□□ 1.39
MTCL1-201ENST00000306329 RPGRIP1LQ68CZ1 1315 aa23.72■■□□□ 1.39
MTCL1-201ENST00000306329 ARAP1Q96P48 1450 aa23.72■■□□□ 1.39
MTCL1-201ENST00000306329 F6X3S4 739 aa23.72■■□□□ 1.39
MTCL1-201ENST00000306329 SCLT1Q96NL6 688 aa23.72■■□□□ 1.39
MTCL1-201ENST00000306329 ZNF213O14771 459 aa23.72■■□□□ 1.39
MTCL1-201ENST00000306329 TNPO1Q92973 898 aaKnown RBP23.72■■□□□ 1.39
MTCL1-201ENST00000306329 C16orf45Q96MC5 204 aaPredicted RBP23.72■■□□□ 1.39
MTCL1-201ENST00000306329 SSRP1Q08945 709 aaKnown RBP23.72■■□□□ 1.39
MTCL1-201ENST00000306329 GOLGA8BA8MQT2 603 aa23.72■■□□□ 1.39
MTCL1-201ENST00000306329 YEATS4O95619 227 aa23.72■■□□□ 1.39
MTCL1-201ENST00000306329 FGFR1OPO95684 399 aaKnown RBP23.72■■□□□ 1.39
MTCL1-201ENST00000306329 MAP3K12Q12852 859 aa23.72■■□□□ 1.39
MTCL1-201ENST00000306329 TAF7Q15545 349 aaPredicted RBP23.72■■□□□ 1.39
MTCL1-201ENST00000306329 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.72■■□□□ 1.39
MTCL1-201ENST00000306329 MACROD2A1Z1Q3 448 aa23.71■■□□□ 1.39
MTCL1-201ENST00000306329 GOLGA8AA7E2F4 631 aa23.71■■□□□ 1.39
MTCL1-201ENST00000306329 CCT2P78371 535 aaKnown RBP23.71■■□□□ 1.39
MTCL1-201ENST00000306329 DZIP1Q86YF9 867 aaKnown RBP23.71■■□□□ 1.39
MTCL1-201ENST00000306329 CGNQ9P2M7 1197 aaKnown RBP23.71■■□□□ 1.39
MTCL1-201ENST00000306329 CCDC96Q2M329 555 aa23.71■■□□□ 1.39
MTCL1-201ENST00000306329 TMEM266Q2M3C6 531 aa23.71■■□□□ 1.39
MTCL1-201ENST00000306329 RAB34Q9BZG1 259 aa23.71■■□□□ 1.39
MTCL1-201ENST00000306329 PRG4Q92954 1404 aaPredicted RBP23.71■■□□□ 1.39
MTCL1-201ENST00000306329 ANKLE2Q86XL3 938 aa23.71■■□□□ 1.39
MTCL1-201ENST00000306329 IQCA1Q86XH1 822 aa23.7■■□□□ 1.38
MTCL1-201ENST00000306329 PLEKHH2Q8IVE3 1493 aa23.7■■□□□ 1.38
MTCL1-201ENST00000306329 GDPD2Q9HCC8 539 aa23.7■■□□□ 1.38
MTCL1-201ENST00000306329 NLRP5P59047 1200 aa23.7■■□□□ 1.38
MTCL1-201ENST00000306329 PPP4R3AQ6IN85 833 aa23.7■■□□□ 1.38
MTCL1-201ENST00000306329 ZNF652Q9Y2D9 606 aa23.7■■□□□ 1.38
MTCL1-201ENST00000306329 CCDC194A0A1B0GVG4 234 aa23.69■■□□□ 1.38
MTCL1-201ENST00000306329 BIN1O00499 593 aa23.69■■□□□ 1.38
MTCL1-201ENST00000306329 CHMP4BP1P59074 171 aa23.69■■□□□ 1.38
MTCL1-201ENST00000306329 TBC1D2Q9BYX2 928 aa23.69■■□□□ 1.38
MTCL1-201ENST00000306329 EHBP1L1Q8N3D4 1523 aa23.69■■□□□ 1.38
MTCL1-201ENST00000306329 IFIT3O14879 490 aaKnown RBP23.69■■□□□ 1.38
MTCL1-201ENST00000306329 TMC6Q7Z403 805 aa23.69■■□□□ 1.38
MTCL1-201ENST00000306329 ZNF444Q8N0Y2 327 aaPredicted RBP23.69■■□□□ 1.38
MTCL1-201ENST00000306329 IFIT5Q13325 482 aaKnown RBP23.69■■□□□ 1.38
MTCL1-201ENST00000306329 RNF187Q5TA31 235 aaPredicted RBP23.69■■□□□ 1.38
MTCL1-201ENST00000306329 CCDC61Q9Y6R9 512 aa23.69■■□□□ 1.38
MTCL1-201ENST00000306329 DDX19AQ9NUU7 478 aaKnown RBP23.68■■□□□ 1.38
MTCL1-201ENST00000306329 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.68■■□□□ 1.383e-6■■■■■ 28.7
MTCL1-201ENST00000306329 TMOD3Q9NYL9 352 aa23.68■■□□□ 1.38
MTCL1-201ENST00000306329 USHBP1Q8N6Y0 703 aa23.68■■□□□ 1.38
MTCL1-201ENST00000306329 KCNH5Q8NCM2 988 aa23.68■■□□□ 1.38
MTCL1-201ENST00000306329 PRKCSHP14314 528 aaPredicted RBP23.68■■□□□ 1.38
MTCL1-201ENST00000306329 GCOM1H8Y6P7 765 aaPredicted RBP23.68■■□□□ 1.38
MTCL1-201ENST00000306329 MYZAPP0CAP1 466 aa23.68■■□□□ 1.38
MTCL1-201ENST00000306329 SMC1AQ14683 1233 aaKnown RBP23.68■■□□□ 1.38
MTCL1-201ENST00000306329 UBE4AQ14139 1066 aa23.67■■□□□ 1.38
MTCL1-201ENST00000306329 ANKIB1Q9P2G1 1089 aa23.67■■□□□ 1.38
MTCL1-201ENST00000306329 TFIP11Q9UBB9 837 aaKnown RBP23.67■■□□□ 1.38
MTCL1-201ENST00000306329 MTIF2P46199 727 aaKnown RBP23.67■■□□□ 1.38
MTCL1-201ENST00000306329 POLA1P09884 1462 aaPredicted RBP23.66■■□□□ 1.38
MTCL1-201ENST00000306329 GJB2P29033 226 aa23.66■■□□□ 1.38
MTCL1-201ENST00000306329 SPECC1Q5M775 1068 aa23.66■■□□□ 1.38
MTCL1-201ENST00000306329 DNAI2Q9GZS0 605 aa23.66■■□□□ 1.38
MTCL1-201ENST00000306329 SLC5A1P13866 664 aa23.66■■□□□ 1.38
MTCL1-201ENST00000306329 HOOK3Q86VS8 718 aa23.66■■□□□ 1.38
MTCL1-201ENST00000306329 DNAAF4Q8WXU2 420 aa23.66■■□□□ 1.38
MTCL1-201ENST00000306329 HLTFQ14527 1009 aaKnown RBP eCLIP23.66■■□□□ 1.38
MTCL1-201ENST00000306329 NEMFO60524 1076 aa23.65■■□□□ 1.38
MTCL1-201ENST00000306329 CUL5Q93034 780 aa23.65■■□□□ 1.38
MTCL1-201ENST00000306329 RNF41Q9H4P4 317 aaPredicted RBP23.65■■□□□ 1.38
MTCL1-201ENST00000306329 NKTRP30414 1462 aaKnown RBP23.65■■□□□ 1.38
MTCL1-201ENST00000306329 KIF20AO95235 890 aa23.65■■□□□ 1.38
MTCL1-201ENST00000306329 STX1AQ16623 288 aa23.65■■□□□ 1.38
MTCL1-201ENST00000306329 GRIN2BQ13224 1484 aa23.65■■□□□ 1.38
MTCL1-201ENST00000306329 GSDMDP57764 484 aa23.65■■□□□ 1.38
MTCL1-201ENST00000306329 ABCC11Q96J66 1382 aa23.64■■□□□ 1.38
MTCL1-201ENST00000306329 ZPR1O75312 459 aa23.64■■□□□ 1.37
MTCL1-201ENST00000306329 ADCY5O95622 1261 aa23.64■■□□□ 1.37
MTCL1-201ENST00000306329 TRERF1Q96PN7 1200 aa23.64■■□□□ 1.37
MTCL1-201ENST00000306329 ALS2CR12Q96Q35 445 aa23.64■■□□□ 1.37
MTCL1-201ENST00000306329 TMCO5BA8MYB1 307 aa23.64■■□□□ 1.37
MTCL1-201ENST00000306329 CATIPQ7Z7H3 387 aa23.64■■□□□ 1.37
MTCL1-201ENST00000306329 SMARCC1Q92922 1105 aaPredicted RBP23.64■■□□□ 1.37
MTCL1-201ENST00000306329 WDR97A6NE52 1622 aa23.64■■□□□ 1.37
MTCL1-201ENST00000306329 TRMT112Q9UI30 125 aaKnown RBP23.63■■□□□ 1.37
MTCL1-201ENST00000306329 STAMBPO95630 424 aa23.63■■□□□ 1.37
MTCL1-201ENST00000306329 SPTY2D1Q68D10 685 aaPredicted RBP23.63■■□□□ 1.37
MTCL1-201ENST00000306329 MICALCLQ6ZW33 695 aa23.62■■□□□ 1.37
MTCL1-201ENST00000306329 CCDC144CPQ8IYA2 1237 aa23.62■■□□□ 1.37
MTCL1-201ENST00000306329 LIG1P18858 919 aa23.62■■□□□ 1.37
MTCL1-201ENST00000306329 CTNNA2P26232 953 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms