RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ZBTB9Q96C00 473 aa15.79■□□□□ 0.12
CHRFAM7A-201ENST00000299847 ZFP91Q96JP5 570 aaPredicted RBP15.79■□□□□ 0.12
CHRFAM7A-201ENST00000299847 TRMT112Q9UI30 125 aaKnown RBP15.79■□□□□ 0.12
CHRFAM7A-201ENST00000299847 PKNOX2Q96KN3 472 aa15.79■□□□□ 0.12
CHRFAM7A-201ENST00000299847 USP25Q9UHP3 1055 aa15.79■□□□□ 0.12
CHRFAM7A-201ENST00000299847 DAPK1P53355 1430 aa15.79■□□□□ 0.12
CHRFAM7A-201ENST00000299847 PTPN14Q15678 1187 aa15.79■□□□□ 0.12
CHRFAM7A-201ENST00000299847 GOLGA6L7A0A1B0GV03 622 aa15.78■□□□□ 0.12
CHRFAM7A-201ENST00000299847 SSRP1Q08945 709 aaKnown RBP15.78■□□□□ 0.12
CHRFAM7A-201ENST00000299847 TMOD2Q9NZR1 351 aa15.78■□□□□ 0.12
CHRFAM7A-201ENST00000299847 ATP5J2-PTCD1G3V325 749 aa15.78■□□□□ 0.12
CHRFAM7A-201ENST00000299847 RARSP54136 660 aaKnown RBP15.78■□□□□ 0.12
CHRFAM7A-201ENST00000299847 NLRP5P59047 1200 aa15.78■□□□□ 0.12
CHRFAM7A-201ENST00000299847 AKAP2Q9Y2D5 859 aa15.78■□□□□ 0.12
CHRFAM7A-201ENST00000299847 GOLGA8AA7E2F4 631 aa15.78■□□□□ 0.12
CHRFAM7A-201ENST00000299847 ZNF213O14771 459 aa15.78■□□□□ 0.12
CHRFAM7A-201ENST00000299847 CCDC183Q5T5S1 534 aa15.78■□□□□ 0.12
CHRFAM7A-201ENST00000299847 TTC16Q8NEE8 873 aa15.78■□□□□ 0.12
CHRFAM7A-201ENST00000299847 MMRN2Q9H8L6 949 aa15.78■□□□□ 0.12
CHRFAM7A-201ENST00000299847 TOP1P11387 765 aaKnown RBP15.78■□□□□ 0.12
CHRFAM7A-201ENST00000299847 GLRX3O76003 335 aaKnown RBP15.78■□□□□ 0.12
CHRFAM7A-201ENST00000299847 PPM1FP49593 454 aaPredicted RBP15.78■□□□□ 0.12
CHRFAM7A-201ENST00000299847 GOLGA6L10A0A0M3HER8 536 aa15.77■□□□□ 0.12
CHRFAM7A-201ENST00000299847 SFPQP23246 707 aaKnown RBP eCLIP15.77■□□□□ 0.12
CHRFAM7A-201ENST00000299847 TTLL12Q14166 644 aaPredicted RBP15.77■□□□□ 0.12
CHRFAM7A-201ENST00000299847 TSG101Q99816 390 aa15.77■□□□□ 0.12
CHRFAM7A-201ENST00000299847 CDK13Q14004 1512 aaKnown RBP15.77■□□□□ 0.12
CHRFAM7A-201ENST00000299847 GRIN2BQ13224 1484 aa15.77■□□□□ 0.12
CHRFAM7A-201ENST00000299847 GJB2P29033 226 aa15.77■□□□□ 0.12
CHRFAM7A-201ENST00000299847 IFIT5Q13325 482 aaKnown RBP15.77■□□□□ 0.12
CHRFAM7A-201ENST00000299847 KIF4BQ2VIQ3 1234 aa15.77■□□□□ 0.12
CHRFAM7A-201ENST00000299847 ZNF444Q8N0Y2 327 aaPredicted RBP15.77■□□□□ 0.12
CHRFAM7A-201ENST00000299847 IFIT3O14879 490 aaKnown RBP15.77■□□□□ 0.11
CHRFAM7A-201ENST00000299847 NESP48681 1621 aa15.77■□□□□ 0.11
CHRFAM7A-201ENST00000299847 GOLIM4O00461 696 aa15.77■□□□□ 0.11
CHRFAM7A-201ENST00000299847 FKBP15Q5T1M5 1219 aa15.77■□□□□ 0.11
CHRFAM7A-201ENST00000299847 C16orf45Q96MC5 204 aaPredicted RBP15.77■□□□□ 0.11
CHRFAM7A-201ENST00000299847 FAM83GA6ND36 823 aa15.76■□□□□ 0.11
CHRFAM7A-201ENST00000299847 MAP2K1Q02750 393 aaPredicted RBP15.76■□□□□ 0.11
CHRFAM7A-201ENST00000299847 TDRD12Q587J7 1177 aaKnown RBP15.76■□□□□ 0.11
CHRFAM7A-201ENST00000299847 PSMD1Q99460 953 aa15.76■□□□□ 0.11
CHRFAM7A-201ENST00000299847 MAP3K2Q9Y2U5 619 aa15.76■□□□□ 0.11
CHRFAM7A-201ENST00000299847 FBLN1P23142 703 aa15.76■□□□□ 0.11
CHRFAM7A-201ENST00000299847 CNNM3Q8NE01 707 aa15.76■□□□□ 0.11
CHRFAM7A-201ENST00000299847 EZRP15311 586 aaKnown RBP15.76■□□□□ 0.11
CHRFAM7A-201ENST00000299847 TMCO3Q6UWJ1 677 aa15.76■□□□□ 0.11
CHRFAM7A-201ENST00000299847 ATAD2Q6PL18 1390 aa15.76■□□□□ 0.11
CHRFAM7A-201ENST00000299847 UBE4AQ14139 1066 aa15.76■□□□□ 0.11
CHRFAM7A-201ENST00000299847 TNPO1Q92973 898 aaKnown RBP15.76■□□□□ 0.11
CHRFAM7A-201ENST00000299847 LARP1Q6PKG0 1096 aaKnown RBP15.76■□□□□ 0.11
CHRFAM7A-201ENST00000299847 FSIP1Q8NA03 581 aa15.76■□□□□ 0.11
CHRFAM7A-201ENST00000299847 CRACR2AQ9BSW2 395 aa15.76■□□□□ 0.11
CHRFAM7A-201ENST00000299847 ANAPC15P60006 121 aa15.75■□□□□ 0.11
CHRFAM7A-201ENST00000299847 KIF5CO60282 957 aa15.75■□□□□ 0.11
CHRFAM7A-201ENST00000299847 ANO10Q9NW15 660 aa15.75■□□□□ 0.11
CHRFAM7A-201ENST00000299847 SYNJ1O43426 1573 aa15.75■□□□□ 0.11
CHRFAM7A-201ENST00000299847 DESP17661 470 aa15.75■□□□□ 0.11
CHRFAM7A-201ENST00000299847 TMC6Q7Z403 805 aa15.75■□□□□ 0.11
CHRFAM7A-201ENST00000299847 TNIP1Q15025 636 aa15.75■□□□□ 0.11
CHRFAM7A-201ENST00000299847 PPP1R12BO60237 982 aaPredicted RBP15.75■□□□□ 0.11
CHRFAM7A-201ENST00000299847 PAXIP1Q6ZW49 1069 aaPredicted RBP15.75■□□□□ 0.11
CHRFAM7A-201ENST00000299847 CTCFLQ8NI51 663 aaPredicted RBP15.75■□□□□ 0.11
CHRFAM7A-201ENST00000299847 ANXA1P04083 346 aa15.74■□□□□ 0.11
CHRFAM7A-201ENST00000299847 SLC5A1P13866 664 aa15.74■□□□□ 0.11
CHRFAM7A-201ENST00000299847 USP8P40818 1118 aa15.74■□□□□ 0.11
CHRFAM7A-201ENST00000299847 CIZ1Q9ULV3 898 aaPredicted RBP15.74■□□□□ 0.11
CHRFAM7A-201ENST00000299847 HSP90AA4PQ58FG1 418 aa15.74■□□□□ 0.11
CHRFAM7A-201ENST00000299847 MAP3K12Q12852 859 aa15.74■□□□□ 0.11
CHRFAM7A-201ENST00000299847 LUZP1Q86V48 1076 aa15.74■□□□□ 0.11
CHRFAM7A-201ENST00000299847 ZNF652Q9Y2D9 606 aa15.74■□□□□ 0.11
CHRFAM7A-201ENST00000299847 A0A087WZG4 1122 aa15.74■□□□□ 0.11
CHRFAM7A-201ENST00000299847 RPGRQ92834 1020 aaKnown RBP15.74■□□□□ 0.11
CHRFAM7A-201ENST00000299847 POTEJP0CG39 1038 aa15.73■□□□□ 0.11
CHRFAM7A-201ENST00000299847 IFFO1Q0D2I5 559 aa15.73■□□□□ 0.11
CHRFAM7A-201ENST00000299847 TBC1D2Q9BYX2 928 aa15.73■□□□□ 0.11
CHRFAM7A-201ENST00000299847 GSTTP1A0A1W2PQM5 241 aa15.73■□□□□ 0.11
CHRFAM7A-201ENST00000299847 DNAAF4Q8WXU2 420 aa15.73■□□□□ 0.11
CHRFAM7A-201ENST00000299847 ZSCAN30Q86W11 494 aa15.73■□□□□ 0.11
CHRFAM7A-201ENST00000299847 HECW1Q76N89 1606 aa15.73■□□□□ 0.11
CHRFAM7A-201ENST00000299847 ZSWIM4Q9H7M6 989 aa15.73■□□□□ 0.11
CHRFAM7A-201ENST00000299847 SLC52A1Q9NWF4 448 aa15.73■□□□□ 0.11
CHRFAM7A-201ENST00000299847 FOXO3O43524 673 aa15.73■□□□□ 0.11
CHRFAM7A-201ENST00000299847 SUPT6HQ7KZ85 1726 aaKnown RBP15.72■□□□□ 0.11
CHRFAM7A-201ENST00000299847 PRPF4BQ13523 1007 aaKnown RBP15.72■□□□□ 0.11
CHRFAM7A-201ENST00000299847 LRRC2Q9BYS8 371 aa15.72■□□□□ 0.11
CHRFAM7A-201ENST00000299847 ANKRD18BA2A2Z9 1011 aa15.72■□□□□ 0.11
CHRFAM7A-201ENST00000299847 SPDYE4A6NLX3 237 aa15.72■□□□□ 0.11
CHRFAM7A-201ENST00000299847 RNF187Q5TA31 235 aaPredicted RBP15.72■□□□□ 0.11
CHRFAM7A-201ENST00000299847 MICU3Q86XE3 530 aa15.72■□□□□ 0.11
CHRFAM7A-201ENST00000299847 CCDC61Q9Y6R9 512 aa15.72■□□□□ 0.11
CHRFAM7A-201ENST00000299847 TCERG1LQ5VWI1 586 aa15.72■□□□□ 0.11
CHRFAM7A-201ENST00000299847 CCDC194A0A1B0GVG4 234 aa15.71■□□□□ 0.11
CHRFAM7A-201ENST00000299847 CUL5Q93034 780 aa15.71■□□□□ 0.11
CHRFAM7A-201ENST00000299847 MTIF2P46199 727 aaKnown RBP15.71■□□□□ 0.11
CHRFAM7A-201ENST00000299847 TERF1P54274 439 aa15.71■□□□□ 0.11
CHRFAM7A-201ENST00000299847 TICAM2Q86XR7 235 aa15.71■□□□□ 0.11
CHRFAM7A-201ENST00000299847 NKTRP30414 1462 aaKnown RBP15.71■□□□□ 0.11
CHRFAM7A-201ENST00000299847 ECM2O94769 699 aaPredicted RBP15.71■□□□□ 0.11
CHRFAM7A-201ENST00000299847 TRIM27P14373 513 aa15.71■□□□□ 0.11
CHRFAM7A-201ENST00000299847 PPP4R3AQ6IN85 833 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms