RNA–Protein interactions for RNA: ENST00000299540.6

AMD1P4-201, Transcript of adenosylmethionine decarboxylase 1 pseudogene 4, humanhuman

BASIC

Gene AMD1P4, Length 1,345 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMD1P4-201ENST00000299540 LINC00116Q8NCU8 138 aa16.19■□□□□ 0.18
AMD1P4-201ENST00000299540 CCNL1Q9UK58 526 aaPredicted RBP16.19■□□□□ 0.18
AMD1P4-201ENST00000299540 USP16Q9Y5T5 823 aa16.19■□□□□ 0.18
AMD1P4-201ENST00000299540 SNRPA1P09661 255 aaKnown RBP16.19■□□□□ 0.18
AMD1P4-201ENST00000299540 CYP19A1P11511 503 aaPredicted RBP16.19■□□□□ 0.18
AMD1P4-201ENST00000299540 ATP6V1AP38606 617 aa16.19■□□□□ 0.18
AMD1P4-201ENST00000299540 MYH16Q9H6N6 1097 aa16.19■□□□□ 0.18
AMD1P4-201ENST00000299540 HOXB7P09629 217 aa16.17■□□□□ 0.18
AMD1P4-201ENST00000299540 EXOSC9Q06265 439 aaKnown RBP16.17■□□□□ 0.18
AMD1P4-201ENST00000299540 INTS5Q6P9B9 1019 aaKnown RBP16.17■□□□□ 0.18
AMD1P4-201ENST00000299540 AKT1S1Q96B36 256 aa16.17■□□□□ 0.18
AMD1P4-201ENST00000299540 LAMB4A4D0S4 1761 aa16.16■□□□□ 0.18
AMD1P4-201ENST00000299540 C4BP0C0L5 1744 aa16.16■□□□□ 0.18
AMD1P4-201ENST00000299540 CNTNAP4Q9C0A0 1308 aa16.16■□□□□ 0.18
AMD1P4-201ENST00000299540 VAMP4O75379 141 aa16.16■□□□□ 0.18
AMD1P4-201ENST00000299540 RC3H1Q5TC82 1133 aaKnown RBP16.16■□□□□ 0.18
AMD1P4-201ENST00000299540 TEX13AQ9BXU3 409 aaPredicted RBP16.16■□□□□ 0.18
AMD1P4-201ENST00000299540 ANO8Q9HCE9 1232 aaPredicted RBP16.16■□□□□ 0.18
AMD1P4-201ENST00000299540 SOS1Q07889 1333 aaPredicted RBP16.15■□□□□ 0.18
AMD1P4-201ENST00000299540 PDIA6Q15084 440 aa16.15■□□□□ 0.18
AMD1P4-201ENST00000299540 LRP10Q7Z4F1 713 aa16.15■□□□□ 0.18
AMD1P4-201ENST00000299540 AMIGO3Q86WK7 504 aa16.15■□□□□ 0.18
AMD1P4-201ENST00000299540 NBPF26B4DH59 902 aa16.14■□□□□ 0.17
AMD1P4-201ENST00000299540 CRKLP46109 303 aaKnown RBP16.14■□□□□ 0.17
AMD1P4-201ENST00000299540 ZNF827Q17R98 1081 aa16.14■□□□□ 0.17
AMD1P4-201ENST00000299540 NBPF14Q5TI25 921 aa16.14■□□□□ 0.17
AMD1P4-201ENST00000299540 NBPF10Q6P3W6 841 aaKnown RBP16.14■□□□□ 0.17
AMD1P4-201ENST00000299540 NBPF15Q8N660 670 aa16.14■□□□□ 0.17
AMD1P4-201ENST00000299540 ELL2O00472 640 aaPredicted RBP16.13■□□□□ 0.17
AMD1P4-201ENST00000299540 YTHDC1Q96MU7 727 aaKnown RBP16.13■□□□□ 0.17
AMD1P4-201ENST00000299540 UBR3Q6ZT12 1888 aa16.12■□□□□ 0.17
AMD1P4-201ENST00000299540 A1BGP04217 495 aa16.12■□□□□ 0.17
AMD1P4-201ENST00000299540 TWISTNBQ3B726 338 aaPredicted RBP16.12■□□□□ 0.17
AMD1P4-201ENST00000299540 ZBTB1Q9Y2K1 713 aa16.12■□□□□ 0.17
AMD1P4-201ENST00000299540 STARD3NLO95772 234 aa16.11■□□□□ 0.17
AMD1P4-201ENST00000299540 CCDC87Q9NVE4 849 aa16.11■□□□□ 0.17
AMD1P4-201ENST00000299540 TUBGCP6Q96RT7 1819 aa16.11■□□□□ 0.17
AMD1P4-201ENST00000299540 ERBB4Q15303 1308 aa16.1■□□□□ 0.17
AMD1P4-201ENST00000299540 RPS6KA4O75676 772 aa16.1■□□□□ 0.17
AMD1P4-201ENST00000299540 EIF5P55010 431 aaKnown RBP16.1■□□□□ 0.17
AMD1P4-201ENST00000299540 SLC15A2Q16348 729 aa16.1■□□□□ 0.17
AMD1P4-201ENST00000299540 QSER1Q2KHR3 1735 aa16.1■□□□□ 0.17
AMD1P4-201ENST00000299540 HMGB2P26583 209 aaKnown RBP16.09■□□□□ 0.17
AMD1P4-201ENST00000299540 PROSER3Q2NL68 480 aa16.09■□□□□ 0.17
AMD1P4-201ENST00000299540 SMIM5Q71RC9 77 aa16.09■□□□□ 0.17
AMD1P4-201ENST00000299540 CT47B1P0C2W7 299 aaPredicted RBP16.08■□□□□ 0.16
AMD1P4-201ENST00000299540 EIF2S2P20042 333 aaKnown RBP16.08■□□□□ 0.16
AMD1P4-201ENST00000299540 PIP4K2AP48426 406 aaPredicted RBP16.08■□□□□ 0.16
AMD1P4-201ENST00000299540 HDGFL1Q5TGJ6 251 aa16.08■□□□□ 0.16
AMD1P4-201ENST00000299540 DDX21Q9NR30 783 aaKnown RBP eCLIP16.08■□□□□ 0.16
AMD1P4-201ENST00000299540 IL6STP40189 918 aaPredicted RBP16.07■□□□□ 0.16
AMD1P4-201ENST00000299540 PNPLA7Q6ZV29 1317 aa16.07■□□□□ 0.16
AMD1P4-201ENST00000299540 GNPATO15228 680 aa16.06■□□□□ 0.16
AMD1P4-201ENST00000299540 NECTIN2Q92692 538 aa16.06■□□□□ 0.16
AMD1P4-201ENST00000299540 CHPF2Q9P2E5 772 aa16.06■□□□□ 0.16
AMD1P4-201ENST00000299540 CACNA1FO60840 1977 aa16.06■□□□□ 0.16
AMD1P4-201ENST00000299540 ANXA1P04083 346 aa16.05■□□□□ 0.16
AMD1P4-201ENST00000299540 CANXP27824 592 aaKnown RBP16.05■□□□□ 0.16
AMD1P4-201ENST00000299540 SSFA2P28290 1259 aa16.05■□□□□ 0.16
AMD1P4-201ENST00000299540 CCDC30Q5VVM6 783 aa16.05■□□□□ 0.16
AMD1P4-201ENST00000299540 ZNF428Q96B54 188 aa16.05■□□□□ 0.16
AMD1P4-201ENST00000299540 STK32BQ9NY57 414 aa16.05■□□□□ 0.16
AMD1P4-201ENST00000299540 DBF4Q9UBU7 674 aaPredicted RBP16.05■□□□□ 0.16
AMD1P4-201ENST00000299540 RARSP54136 660 aaKnown RBP16.04■□□□□ 0.16
AMD1P4-201ENST00000299540 BRPF1P55201 1214 aaPredicted RBP16.04■□□□□ 0.16
AMD1P4-201ENST00000299540 COL23A1Q86Y22 540 aaPredicted RBP16.04■□□□□ 0.16
AMD1P4-201ENST00000299540 SSH1Q8WYL5 1049 aa16.04■□□□□ 0.16
AMD1P4-201ENST00000299540 ARHGEF1Q92888 912 aaKnown RBP16.04■□□□□ 0.16
AMD1P4-201ENST00000299540 AK7Q96M32 723 aa16.04■□□□□ 0.16
AMD1P4-201ENST00000299540 RTCBQ9Y3I0 505 aaKnown RBP16.04■□□□□ 0.16
AMD1P4-201ENST00000299540 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.03■□□□□ 0.16
AMD1P4-201ENST00000299540 TCERG1O14776 1098 aaKnown RBP16.03■□□□□ 0.16
AMD1P4-201ENST00000299540 C4AP0C0L4 1744 aa16.03■□□□□ 0.16
AMD1P4-201ENST00000299540 ALDH1L2Q3SY69 923 aa16.03■□□□□ 0.16
AMD1P4-201ENST00000299540 G2E3Q7L622 706 aa16.03■□□□□ 0.16
AMD1P4-201ENST00000299540 MRPL50Q8N5N7 158 aaKnown RBP16.03■□□□□ 0.16
AMD1P4-201ENST00000299540 COL15A1P39059 1388 aa16.03■□□□□ 0.16
AMD1P4-201ENST00000299540 CASZ1Q86V15 1759 aa16.02■□□□□ 0.16
AMD1P4-201ENST00000299540 CHMP4AQ9BY43 222 aa16.02■□□□□ 0.16
AMD1P4-201ENST00000299540 PDGFDQ9GZP0 370 aaPredicted RBP16.02■□□□□ 0.16
AMD1P4-201ENST00000299540 PHAXQ9H814 394 aaKnown RBP16.02■□□□□ 0.16
AMD1P4-201ENST00000299540 MYL6BP14649 208 aa16.01■□□□□ 0.15
AMD1P4-201ENST00000299540 TTLL7Q6ZT98 887 aa16.01■□□□□ 0.15
AMD1P4-201ENST00000299540 BCL2L12Q9HB09 334 aa16.01■□□□□ 0.15
AMD1P4-201ENST00000299540 HYPKQ9NX55 129 aa16.01■□□□□ 0.15
AMD1P4-201ENST00000299540 TFCP2L1Q9NZI6 479 aa16.01■□□□□ 0.15
AMD1P4-201ENST00000299540 CAMTA2O94983 1202 aa16■□□□□ 0.15
AMD1P4-201ENST00000299540 SLC4A2P04920 1241 aa16■□□□□ 0.15
AMD1P4-201ENST00000299540 TRAPPC3LQ5T215 181 aa16■□□□□ 0.15
AMD1P4-201ENST00000299540 COPS6Q7L5N1 327 aa16■□□□□ 0.15
AMD1P4-201ENST00000299540 FLAD1Q8NFF5 587 aa16■□□□□ 0.15
AMD1P4-201ENST00000299540 NARFQ9UHQ1 456 aa16■□□□□ 0.15
AMD1P4-201ENST00000299540 R3HDM1Q15032 1099 aaKnown RBP15.99■□□□□ 0.15
AMD1P4-201ENST00000299540 XAGE3Q8WTP9 111 aa15.99■□□□□ 0.15
AMD1P4-201ENST00000299540 USP42Q9H9J4 1324 aaKnown RBP15.99■□□□□ 0.15
AMD1P4-201ENST00000299540 COL24A1Q17RW2 1714 aa15.99■□□□□ 0.15
AMD1P4-201ENST00000299540 BCORQ6W2J9 1755 aa15.99■□□□□ 0.15
AMD1P4-201ENST00000299540 A0A087WZG4 1122 aa15.98■□□□□ 0.15
AMD1P4-201ENST00000299540 RGL2O15211 777 aa15.98■□□□□ 0.15
AMD1P4-201ENST00000299540 PHF14O94880 888 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms