RNA–Protein interactions for RNA: ENST00000274787.2

HIGD2A-201, Transcript of HIG1 hypoxia inducible domain family member 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD2A, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD2A-201ENST00000274787 APAF1O14727 1248 aa17.47■□□□□ 0.39
HIGD2A-201ENST00000274787 PHF14O94880 888 aa17.47■□□□□ 0.39
HIGD2A-201ENST00000274787 MSH5O43196 834 aa17.46■□□□□ 0.39
HIGD2A-201ENST00000274787 POLD1P28340 1107 aa17.46■□□□□ 0.39
HIGD2A-201ENST00000274787 CCDC27Q2M243 656 aa17.46■□□□□ 0.39
HIGD2A-201ENST00000274787 ARHGEF1Q92888 912 aaKnown RBP17.46■□□□□ 0.39
HIGD2A-201ENST00000274787 EIF4A1P60842 406 aaKnown RBP17.45■□□□□ 0.38
HIGD2A-201ENST00000274787 NEUROD2Q15784 382 aa17.45■□□□□ 0.38
HIGD2A-201ENST00000274787 PPP1R1BQ9UD71 204 aaPredicted RBP17.45■□□□□ 0.38
HIGD2A-201ENST00000274787 ZBTB1Q9Y2K1 713 aa17.45■□□□□ 0.38
HIGD2A-201ENST00000274787 COL15A1P39059 1388 aa17.44■□□□□ 0.38
HIGD2A-201ENST00000274787 CHL1O00533 1208 aa17.44■□□□□ 0.38
HIGD2A-201ENST00000274787 RFC4P35249 363 aa17.44■□□□□ 0.38
HIGD2A-201ENST00000274787 CALD1Q05682 793 aaKnown RBP17.44■□□□□ 0.38
HIGD2A-201ENST00000274787 ARXQ96QS3 562 aa17.44■□□□□ 0.38
HIGD2A-201ENST00000274787 MIS18AQ9NYP9 233 aa17.44■□□□□ 0.38
HIGD2A-201ENST00000274787 USP42Q9H9J4 1324 aaKnown RBP17.44■□□□□ 0.38
HIGD2A-201ENST00000274787 CCER2I3L3R5 266 aa17.43■□□□□ 0.38
HIGD2A-201ENST00000274787 IL6STP40189 918 aaPredicted RBP17.43■□□□□ 0.38
HIGD2A-201ENST00000274787 EIF5P55010 431 aaKnown RBP17.43■□□□□ 0.38
HIGD2A-201ENST00000274787 SMIM5Q71RC9 77 aa17.43■□□□□ 0.38
HIGD2A-201ENST00000274787 NLGN1Q8N2Q7 840 aa17.43■□□□□ 0.38
HIGD2A-201ENST00000274787 TSPYL4Q9UJ04 414 aa17.43■□□□□ 0.38
HIGD2A-201ENST00000274787 SCN7AQ01118 1682 aa17.42■□□□□ 0.38
HIGD2A-201ENST00000274787 A0A087WZG4 1122 aa17.42■□□□□ 0.38
HIGD2A-201ENST00000274787 GIGYF1O75420 1035 aaPredicted RBP17.42■□□□□ 0.38
HIGD2A-201ENST00000274787 NGEFQ8N5V2 710 aa17.42■□□□□ 0.38
HIGD2A-201ENST00000274787 CFAP44Q96MT7 982 aa17.42■□□□□ 0.38
HIGD2A-201ENST00000274787 USP16Q9Y5T5 823 aa17.42■□□□□ 0.38
HIGD2A-201ENST00000274787 ZNF853P0CG23 659 aa17.41■□□□□ 0.38
HIGD2A-201ENST00000274787 GYS1P13807 737 aa17.41■□□□□ 0.38
HIGD2A-201ENST00000274787 NARFQ9UHQ1 456 aa17.41■□□□□ 0.38
HIGD2A-201ENST00000274787 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
HIGD2A-201ENST00000274787 KIF13BQ9NQT8 1826 aa17.4■□□□□ 0.38
HIGD2A-201ENST00000274787 MSL1Q68DK7 614 aa17.4■□□□□ 0.38
HIGD2A-201ENST00000274787 IFT57Q9NWB7 429 aa17.4■□□□□ 0.38
HIGD2A-201ENST00000274787 ERBB4Q15303 1308 aa17.4■□□□□ 0.38
HIGD2A-201ENST00000274787 PRAMEF22A3QJZ6 481 aa17.39■□□□□ 0.37
HIGD2A-201ENST00000274787 CANXP27824 592 aaKnown RBP17.39■□□□□ 0.37
HIGD2A-201ENST00000274787 RGL2O15211 777 aa17.38■□□□□ 0.37
HIGD2A-201ENST00000274787 ZPR1O75312 459 aa17.38■□□□□ 0.37
HIGD2A-201ENST00000274787 A1BGP04217 495 aa17.38■□□□□ 0.37
HIGD2A-201ENST00000274787 GNAI1P63096 354 aa17.38■□□□□ 0.37
HIGD2A-201ENST00000274787 FHDC1Q9C0D6 1143 aaPredicted RBP17.38■□□□□ 0.37
HIGD2A-201ENST00000274787 HOXB7P09629 217 aa17.37■□□□□ 0.37
HIGD2A-201ENST00000274787 WWC1Q8IX03 1113 aa17.37■□□□□ 0.37
HIGD2A-201ENST00000274787 SYT17Q9BSW7 474 aa17.37■□□□□ 0.37
HIGD2A-201ENST00000274787 IL16Q14005 1332 aa17.37■□□□□ 0.37
HIGD2A-201ENST00000274787 NBPF26B4DH59 902 aa17.36■□□□□ 0.37
HIGD2A-201ENST00000274787 DIEXFQ68CQ4 756 aaKnown RBP17.36■□□□□ 0.37
HIGD2A-201ENST00000274787 NBPF10Q6P3W6 841 aaKnown RBP17.36■□□□□ 0.37
HIGD2A-201ENST00000274787 FAM9BQ8IZU0 186 aa17.36■□□□□ 0.37
HIGD2A-201ENST00000274787 NBPF15Q8N660 670 aa17.36■□□□□ 0.37
HIGD2A-201ENST00000274787 SRP68Q9UHB9 627 aaKnown RBP17.36■□□□□ 0.37
HIGD2A-201ENST00000274787 CD2APQ9Y5K6 639 aa17.36■□□□□ 0.37
HIGD2A-201ENST00000274787 NRXN2Q9P2S2 1712 aa17.35■□□□□ 0.37
HIGD2A-201ENST00000274787 MMP10P09238 476 aa17.35■□□□□ 0.37
HIGD2A-201ENST00000274787 USPL1Q5W0Q7 1092 aa17.35■□□□□ 0.37
HIGD2A-201ENST00000274787 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
HIGD2A-201ENST00000274787 MBIPQ9NS73 344 aa17.35■□□□□ 0.37
HIGD2A-201ENST00000274787 TM4SF1P30408 202 aa17.34■□□□□ 0.37
HIGD2A-201ENST00000274787 FKBP8Q14318 412 aa17.34■□□□□ 0.37
HIGD2A-201ENST00000274787 BCL2L12Q9HB09 334 aa17.34■□□□□ 0.37
HIGD2A-201ENST00000274787 WDR63Q8IWG1 891 aa17.33■□□□□ 0.36
HIGD2A-201ENST00000274787 LAS1LQ9Y4W2 734 aaKnown RBP17.33■□□□□ 0.36
HIGD2A-201ENST00000274787 AFDNP55196 1824 aaKnown RBP17.33■□□□□ 0.36
HIGD2A-201ENST00000274787 C10orf71Q711Q0 1435 aa17.32■□□□□ 0.36
HIGD2A-201ENST00000274787 CAMTA2O94983 1202 aa17.32■□□□□ 0.36
HIGD2A-201ENST00000274787 CLEC4GQ6UXB4 293 aa17.32■□□□□ 0.36
HIGD2A-201ENST00000274787 KIAA1551Q9HCM1 1747 aa17.31■□□□□ 0.36
HIGD2A-201ENST00000274787 DZIP3Q86Y13 1208 aaKnown RBP17.31■□□□□ 0.36
HIGD2A-201ENST00000274787 PARP3Q9Y6F1 533 aa17.31■□□□□ 0.36
HIGD2A-201ENST00000274787 DDR1Q08345 913 aa17.3■□□□□ 0.36
HIGD2A-201ENST00000274787 PDIA6Q15084 440 aa17.3■□□□□ 0.36
HIGD2A-201ENST00000274787 LRP10Q7Z4F1 713 aa17.3■□□□□ 0.36
HIGD2A-201ENST00000274787 CHMP4AQ9BY43 222 aa17.3■□□□□ 0.36
HIGD2A-201ENST00000274787 TBC1D2BQ9UPU7 963 aa17.3■□□□□ 0.36
HIGD2A-201ENST00000274787 NUP98P52948 1817 aa17.3■□□□□ 0.36
HIGD2A-201ENST00000274787 ERVV-1B6SEH8 477 aa17.29■□□□□ 0.36
HIGD2A-201ENST00000274787 POLRMTO00411 1230 aaKnown RBP17.29■□□□□ 0.36
HIGD2A-201ENST00000274787 PIP4K2AP48426 406 aaPredicted RBP17.29■□□□□ 0.36
HIGD2A-201ENST00000274787 NFIXQ14938 502 aa17.29■□□□□ 0.36
HIGD2A-201ENST00000274787 ZNF652Q9Y2D9 606 aa17.29■□□□□ 0.36
HIGD2A-201ENST00000274787 ZNF330Q9Y3S2 320 aaPredicted RBP17.29■□□□□ 0.36
HIGD2A-201ENST00000274787 ZNF521Q96K83 1311 aa17.28■□□□□ 0.36
HIGD2A-201ENST00000274787 KRT24Q2M2I5 525 aa17.28■□□□□ 0.36
HIGD2A-201ENST00000274787 DUSP27Q5VZP5 1158 aa17.28■□□□□ 0.36
HIGD2A-201ENST00000274787 CARMIL3Q8ND23 1372 aa17.28■□□□□ 0.36
HIGD2A-201ENST00000274787 BRCA1P38398 1863 aaKnown RBP17.27■□□□□ 0.36
HIGD2A-201ENST00000274787 EIF2S2P20042 333 aaKnown RBP17.27■□□□□ 0.36
HIGD2A-201ENST00000274787 DDX21Q9NR30 783 aaKnown RBP eCLIP17.27■□□□□ 0.36
HIGD2A-201ENST00000274787 CACNA1FO60840 1977 aa17.27■□□□□ 0.36
HIGD2A-201ENST00000274787 TGFB2P61812 414 aa17.26■□□□□ 0.35
HIGD2A-201ENST00000274787 HDGFL1Q5TGJ6 251 aa17.26■□□□□ 0.35
HIGD2A-201ENST00000274787 MAP3K15Q6ZN16 1313 aa17.25■□□□□ 0.35
HIGD2A-201ENST00000274787 ATP10DQ9P241 1426 aa17.25■□□□□ 0.35
HIGD2A-201ENST00000274787 TBC1D9BQ66K14 1250 aa17.25■□□□□ 0.35
HIGD2A-201ENST00000274787 KIF6Q6ZMV9 814 aa17.25■□□□□ 0.35
HIGD2A-201ENST00000274787 MIER1Q8N108 512 aa17.25■□□□□ 0.35
HIGD2A-201ENST00000274787 KLHL34Q8N239 644 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms