RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 GOLGA6L7A0A1B0GV03 622 aa11.89□□□□□ -0.51
LAMA3-201ENST00000269217 TOP1P11387 765 aaKnown RBP11.89□□□□□ -0.51
LAMA3-201ENST00000269217 MAP3K12Q12852 859 aa11.89□□□□□ -0.51
LAMA3-201ENST00000269217 IFIT5Q13325 482 aaKnown RBP11.89□□□□□ -0.51
LAMA3-201ENST00000269217 TMOD3Q9NYL9 352 aa11.89□□□□□ -0.51
LAMA3-201ENST00000269217 ZNF213O14771 459 aa11.89□□□□□ -0.51
LAMA3-201ENST00000269217 RBM5P52756 815 aaKnown RBP eCLIP11.89□□□□□ -0.51
LAMA3-201ENST00000269217 USHBP1Q8N6Y0 703 aa11.89□□□□□ -0.51
LAMA3-201ENST00000269217 ARHGAP45Q92619 1136 aa11.89□□□□□ -0.51
LAMA3-201ENST00000269217 STX6O43752 255 aa11.89□□□□□ -0.51
LAMA3-201ENST00000269217 BAG4O95429 457 aaKnown RBP11.89□□□□□ -0.51
LAMA3-201ENST00000269217 MCM5P33992 734 aa11.89□□□□□ -0.51
LAMA3-201ENST00000269217 SEPT7Q16181 437 aaKnown RBP11.89□□□□□ -0.51
LAMA3-201ENST00000269217 CAVIN4Q5BKX8 364 aa11.89□□□□□ -0.51
LAMA3-201ENST00000269217 PIBF1Q8WXW3 757 aa11.89□□□□□ -0.51
LAMA3-201ENST00000269217 MBIPQ9NS73 344 aa11.89□□□□□ -0.51
LAMA3-201ENST00000269217 USP25Q9UHP3 1055 aa11.89□□□□□ -0.51
LAMA3-201ENST00000269217 PTCD1O75127 700 aaKnown RBP11.89□□□□□ -0.51
LAMA3-201ENST00000269217 HSP90AB3PQ58FF7 597 aa11.89□□□□□ -0.51
LAMA3-201ENST00000269217 PIK3R4Q99570 1358 aa11.88□□□□□ -0.51
LAMA3-201ENST00000269217 ZRSR2Q15696 482 aaKnown RBP11.88□□□□□ -0.51
LAMA3-201ENST00000269217 ANKRD18AQ8IVF6 992 aa11.88□□□□□ -0.51
LAMA3-201ENST00000269217 ZNF76P36508 570 aa11.88□□□□□ -0.51
LAMA3-201ENST00000269217 FAM193AP78312 1265 aa11.88□□□□□ -0.51
LAMA3-201ENST00000269217 CENPHQ9H3R5 247 aa11.88□□□□□ -0.51
LAMA3-201ENST00000269217 SEPT11Q9NVA2 429 aaKnown RBP11.88□□□□□ -0.51
LAMA3-201ENST00000269217 PHF8Q9UPP1 1060 aa11.88□□□□□ -0.51
LAMA3-201ENST00000269217 MINDY4BA8MYZ0 360 aa11.88□□□□□ -0.51
LAMA3-201ENST00000269217 KIF5CO60282 957 aa11.88□□□□□ -0.51
LAMA3-201ENST00000269217 GJB2P29033 226 aa11.88□□□□□ -0.51
LAMA3-201ENST00000269217 SPA17Q15506 151 aa11.88□□□□□ -0.51
LAMA3-201ENST00000269217 KLHL40Q2TBA0 621 aa11.88□□□□□ -0.51
LAMA3-201ENST00000269217 CTCFLQ8NI51 663 aaPredicted RBP11.88□□□□□ -0.51
LAMA3-201ENST00000269217 RNF41Q9H4P4 317 aaPredicted RBP11.88□□□□□ -0.51
LAMA3-201ENST00000269217 SEC63Q9UGP8 760 aaKnown RBP11.88□□□□□ -0.51
LAMA3-201ENST00000269217 SLC12A7Q9Y666 1083 aa11.88□□□□□ -0.51
LAMA3-201ENST00000269217 NUCB1Q02818 461 aa11.88□□□□□ -0.51
LAMA3-201ENST00000269217 IDI1Q13907 227 aa11.88□□□□□ -0.51
LAMA3-201ENST00000269217 MPRIPQ6WCQ1 1025 aa11.88□□□□□ -0.51
LAMA3-201ENST00000269217 ZSCAN29Q8IWY8 852 aaPredicted RBP11.88□□□□□ -0.51
LAMA3-201ENST00000269217 JAKMIP3Q5VZ66 844 aa11.87□□□□□ -0.51
LAMA3-201ENST00000269217 FKBP15Q5T1M5 1219 aa11.87□□□□□ -0.51
LAMA3-201ENST00000269217 USP5P45974 858 aa11.87□□□□□ -0.51
LAMA3-201ENST00000269217 GSDMDP57764 484 aa11.87□□□□□ -0.51
LAMA3-201ENST00000269217 GUCY1B3Q02153 619 aa11.87□□□□□ -0.51
LAMA3-201ENST00000269217 UVSSAQ2YD98 709 aa11.87□□□□□ -0.51
LAMA3-201ENST00000269217 CKAP2LQ8IYA6 745 aa11.87□□□□□ -0.51
LAMA3-201ENST00000269217 FSIP1Q8NA03 581 aa11.87□□□□□ -0.51
LAMA3-201ENST00000269217 NUTM2BA6NNL0 878 aaPredicted RBP11.87□□□□□ -0.51
LAMA3-201ENST00000269217 GOLGA8BA8MQT2 603 aa11.87□□□□□ -0.51
LAMA3-201ENST00000269217 NUTM2EB1AL46 878 aaPredicted RBP11.87□□□□□ -0.51
LAMA3-201ENST00000269217 SLC5A1P13866 664 aa11.87□□□□□ -0.51
LAMA3-201ENST00000269217 CASQ1P31415 396 aa11.87□□□□□ -0.51
LAMA3-201ENST00000269217 IQCA1Q86XH1 822 aa11.87□□□□□ -0.51
LAMA3-201ENST00000269217 NUTM2AQ8IVF1 878 aaPredicted RBP11.87□□□□□ -0.51
LAMA3-201ENST00000269217 HMG20BQ9P0W2 317 aa11.87□□□□□ -0.51
LAMA3-201ENST00000269217 PPP1R12BO60237 982 aaPredicted RBP11.86□□□□□ -0.51
LAMA3-201ENST00000269217 SSRP1Q08945 709 aaKnown RBP11.86□□□□□ -0.51
LAMA3-201ENST00000269217 CRACR2AQ9BSW2 395 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 A0A087WZG4 1122 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 STX1AQ16623 288 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 KLHL10Q6JEL2 608 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 BICDL1Q6ZP65 573 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 ASXL1Q8IXJ9 1541 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 GOLGA8AA7E2F4 631 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 CAVIN2O95810 425 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 UBE2HP62256 183 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 MAP9Q49MG5 647 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 CNNM3Q8NE01 707 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 URI1O94763 535 aaPredicted RBP11.86□□□□□ -0.51
LAMA3-201ENST00000269217 MCM3P25205 808 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 USP8P40818 1118 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 TSG101Q99816 390 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 MKNK2Q9HBH9 465 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 AMOTL2Q9Y2J4 779 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 MAP3K2Q9Y2U5 619 aa11.86□□□□□ -0.51
LAMA3-201ENST00000269217 ANKRD18BA2A2Z9 1011 aa11.85□□□□□ -0.51
LAMA3-201ENST00000269217 TNNT1P13805 278 aa11.85□□□□□ -0.51
LAMA3-201ENST00000269217 HMGB2P26583 209 aaKnown RBP11.85□□□□□ -0.51
LAMA3-201ENST00000269217 ENOX2Q16206 610 aaKnown RBP11.85□□□□□ -0.51
LAMA3-201ENST00000269217 CGNQ9P2M7 1197 aaKnown RBP11.85□□□□□ -0.51
LAMA3-201ENST00000269217 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
LAMA3-201ENST00000269217 POLR3DP05423 398 aaPredicted RBP11.85□□□□□ -0.51
LAMA3-201ENST00000269217 PKNOX2Q96KN3 472 aa11.85□□□□□ -0.51
LAMA3-201ENST00000269217 FGFR1OPO95684 399 aaKnown RBP11.85□□□□□ -0.51
LAMA3-201ENST00000269217 KIF4BQ2VIQ3 1234 aa11.85□□□□□ -0.51
LAMA3-201ENST00000269217 PPP1R42Q7Z4L9 355 aa11.85□□□□□ -0.51
LAMA3-201ENST00000269217 TAX1BP1Q86VP1 789 aa11.85□□□□□ -0.51
LAMA3-201ENST00000269217 GDPD2Q9HCC8 539 aa11.85□□□□□ -0.51
LAMA3-201ENST00000269217 IFIT3O14879 490 aaKnown RBP11.85□□□□□ -0.51
LAMA3-201ENST00000269217 RAB34Q9BZG1 259 aa11.85□□□□□ -0.51
LAMA3-201ENST00000269217 THOC2Q8NI27 1593 aaKnown RBP11.85□□□□□ -0.51
LAMA3-201ENST00000269217 CCT2P78371 535 aaKnown RBP11.84□□□□□ -0.51
LAMA3-201ENST00000269217 ADCY5O95622 1261 aa11.84□□□□□ -0.51
LAMA3-201ENST00000269217 NUP160Q12769 1436 aa11.84□□□□□ -0.51
LAMA3-201ENST00000269217 TTF1Q15361 905 aaPredicted RBP11.84□□□□□ -0.51
LAMA3-201ENST00000269217 TAF3Q5VWG9 929 aa11.84□□□□□ -0.51
LAMA3-201ENST00000269217 CALRP27797 417 aaKnown RBP11.84□□□□□ -0.51
LAMA3-201ENST00000269217 NEK1Q96PY6 1258 aa11.84□□□□□ -0.51
LAMA3-201ENST00000269217 TRMT112Q9UI30 125 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms