RNA–Protein interactions for RNA: ENST00000265085.9

CPEB4-201, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPEB4, Length 9,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-201ENST00000265085 PANK3Q9H999 370 aa9.48□□□□□ -0.89
CPEB4-201ENST00000265085 LACTBP83111 547 aaPredicted RBP9.48□□□□□ -0.89
CPEB4-201ENST00000265085 PPFIBP2Q8ND30 876 aa9.48□□□□□ -0.89
CPEB4-201ENST00000265085 NUP62CLQ9H1M0 184 aa9.48□□□□□ -0.89
CPEB4-201ENST00000265085 DYTNA2CJ06 578 aa9.48□□□□□ -0.89
CPEB4-201ENST00000265085 OLFM4Q6UX06 510 aa9.48□□□□□ -0.89
CPEB4-201ENST00000265085 CCDC150Q8NCX0 1101 aa9.48□□□□□ -0.89
CPEB4-201ENST00000265085 TBC1D32Q96NH3 1257 aa9.48□□□□□ -0.89
CPEB4-201ENST00000265085 SEPT11Q9NVA2 429 aaKnown RBP9.48□□□□□ -0.89
CPEB4-201ENST00000265085 OPA1O60313 960 aa9.48□□□□□ -0.89
CPEB4-201ENST00000265085 ATP11AP98196 1134 aa9.48□□□□□ -0.89
CPEB4-201ENST00000265085 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.48□□□□□ -0.89
CPEB4-201ENST00000265085 CXorf38Q8TB03 319 aa9.48□□□□□ -0.89
CPEB4-201ENST00000265085 IQCA1Q86XH1 822 aa9.48□□□□□ -0.89
CPEB4-201ENST00000265085 DDX19BQ9UMR2 479 aa9.48□□□□□ -0.89
CPEB4-201ENST00000265085 KCTD17Q8N5Z5 321 aa9.48□□□□□ -0.89
CPEB4-201ENST00000265085 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.48□□□□□ -0.89
CPEB4-201ENST00000265085 DDX41Q9UJV9 622 aaKnown RBP9.48□□□□□ -0.89
CPEB4-201ENST00000265085 FILIP1LQ4L180 1135 aa9.47□□□□□ -0.89
CPEB4-201ENST00000265085 PDCP20941 246 aa9.47□□□□□ -0.89
CPEB4-201ENST00000265085 LIG3P49916 1009 aa9.47□□□□□ -0.89
CPEB4-201ENST00000265085 ITGB1BP2Q9UKP3 347 aa9.47□□□□□ -0.89
CPEB4-201ENST00000265085 NAP1L3Q99457 506 aaPredicted RBP9.47□□□□□ -0.89
CPEB4-201ENST00000265085 CA8P35219 290 aa9.47□□□□□ -0.89
CPEB4-201ENST00000265085 FKBP5Q13451 457 aaPredicted RBP9.47□□□□□ -0.89
CPEB4-201ENST00000265085 PPFIA2O75334 1257 aa9.47□□□□□ -0.89
CPEB4-201ENST00000265085 PRIM1P49642 420 aaKnown RBP9.47□□□□□ -0.89
CPEB4-201ENST00000265085 TSC1Q92574 1164 aa9.47□□□□□ -0.89
CPEB4-201ENST00000265085 GBP5Q96PP8 586 aa9.47□□□□□ -0.89
CPEB4-201ENST00000265085 COG6Q9Y2V7 657 aa9.47□□□□□ -0.89
CPEB4-201ENST00000265085 RABGAP1Q9Y3P9 1069 aa9.47□□□□□ -0.89
CPEB4-201ENST00000265085 NDUFAB1O14561 156 aa9.47□□□□□ -0.89
CPEB4-201ENST00000265085 DDX46Q7L014 1031 aaKnown RBP9.47□□□□□ -0.89
CPEB4-201ENST00000265085 ZNF280CQ8ND82 737 aa9.47□□□□□ -0.89
CPEB4-201ENST00000265085 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.47□□□□□ -0.89
CPEB4-201ENST00000265085 ATP8B1O43520 1251 aa9.47□□□□□ -0.89
CPEB4-201ENST00000265085 LAMB3Q13751 1172 aa9.47□□□□□ -0.89
CPEB4-201ENST00000265085 TTC19Q6DKK2 380 aaPredicted RBP9.47□□□□□ -0.89
CPEB4-201ENST00000265085 IBTKQ9P2D0 1353 aaPredicted RBP9.46□□□□□ -0.89
CPEB4-201ENST00000265085 EP400NLQ6ZTU2 488 aa9.46□□□□□ -0.89
CPEB4-201ENST00000265085 ZNF445P59923 1031 aa9.46□□□□□ -0.9
CPEB4-201ENST00000265085 CCDC47Q96A33 483 aaKnown RBP9.46□□□□□ -0.9
CPEB4-201ENST00000265085 GBP1P32455 592 aa9.46□□□□□ -0.9
CPEB4-201ENST00000265085 CCDC80Q76M96 950 aa9.46□□□□□ -0.9
CPEB4-201ENST00000265085 CFAP57Q96MR6 1250 aa9.46□□□□□ -0.9
CPEB4-201ENST00000265085 SSBP05455 408 aaKnown RBP eCLIP9.46□□□□□ -0.9
CPEB4-201ENST00000265085 NSRP1Q9H0G5 558 aaKnown RBP9.46□□□□□ -0.9
CPEB4-201ENST00000265085 CCDC6Q16204 474 aa9.46□□□□□ -0.9
CPEB4-201ENST00000265085 LIMCH1Q9UPQ0 1083 aa9.46□□□□□ -0.9
CPEB4-201ENST00000265085 CCDC160A6NGH7 325 aa9.45□□□□□ -0.9
CPEB4-201ENST00000265085 TMED1Q13445 227 aa9.45□□□□□ -0.9
CPEB4-201ENST00000265085 SSFA2P28290 1259 aa9.45□□□□□ -0.9
CPEB4-201ENST00000265085 CHUKO15111 745 aa9.45□□□□□ -0.9
CPEB4-201ENST00000265085 ELF1P32519 619 aa9.45□□□□□ -0.9
CPEB4-201ENST00000265085 RAB3GAP1Q15042 981 aa9.45□□□□□ -0.9
CPEB4-201ENST00000265085 ZKSCAN2Q63HK3 967 aa9.45□□□□□ -0.9
CPEB4-201ENST00000265085 SLC30A9Q6PML9 568 aa9.45□□□□□ -0.9
CPEB4-201ENST00000265085 IFT74Q96LB3 600 aa9.45□□□□□ -0.9
CPEB4-201ENST00000265085 RPAP2Q8IXW5 612 aaPredicted RBP9.45□□□□□ -0.9
CPEB4-201ENST00000265085 SPDL1Q96EA4 605 aa9.45□□□□□ -0.9
CPEB4-201ENST00000265085 BRD4O60885 1362 aaPredicted RBP9.45□□□□□ -0.9
CPEB4-201ENST00000265085 TRMT1Q9NXH9 659 aaKnown RBP9.45□□□□□ -0.9
CPEB4-201ENST00000265085 CACNA2D3Q8IZS8 1091 aa9.45□□□□□ -0.9
CPEB4-201ENST00000265085 C17orf50Q8WW18 174 aa9.45□□□□□ -0.9
CPEB4-201ENST00000265085 UBAP1Q9NZ09 502 aa9.45□□□□□ -0.9
CPEB4-201ENST00000265085 EIF3CLB5ME19 914 aaKnown RBP9.44□□□□□ -0.9
CPEB4-201ENST00000265085 CAPRIN2Q6IMN6 1127 aaKnown RBP9.44□□□□□ -0.9
CPEB4-201ENST00000265085 EIF3CQ99613 913 aaKnown RBP9.44□□□□□ -0.9
CPEB4-201ENST00000265085 SDF4Q9BRK5 362 aa9.44□□□□□ -0.9
CPEB4-201ENST00000265085 VIMP08670 466 aaKnown RBP9.44□□□□□ -0.9
CPEB4-201ENST00000265085 ATAD2Q6PL18 1390 aa9.44□□□□□ -0.9
CPEB4-201ENST00000265085 SERPINC1P01008 464 aa9.44□□□□□ -0.9
CPEB4-201ENST00000265085 CRYMQ14894 314 aa9.44□□□□□ -0.9
CPEB4-201ENST00000265085 ATRIPQ8WXE1 791 aa9.44□□□□□ -0.9
CPEB4-201ENST00000265085 ERBB4Q15303 1308 aa9.44□□□□□ -0.9
CPEB4-201ENST00000265085 MUM1L1Q5H9M0 696 aa9.44□□□□□ -0.9
CPEB4-201ENST00000265085 ANKRD45Q5TZF3 282 aa9.44□□□□□ -0.9
CPEB4-201ENST00000265085 SRLQ86TD4 932 aa9.44□□□□□ -0.9
CPEB4-201ENST00000265085 TRIML1Q8N9V2 468 aa9.44□□□□□ -0.9
CPEB4-201ENST00000265085 PHACTR2O75167 634 aa9.44□□□□□ -0.9
CPEB4-201ENST00000265085 NAIF1Q69YI7 327 aaPredicted RBP9.44□□□□□ -0.9
CPEB4-201ENST00000265085 CCDC110Q8TBZ0 833 aa9.44□□□□□ -0.9
CPEB4-201ENST00000265085 ATG3Q9NT62 314 aa9.44□□□□□ -0.9
CPEB4-201ENST00000265085 PPP1R12BO60237 982 aaPredicted RBP9.43□□□□□ -0.9
CPEB4-201ENST00000265085 TROVE2P10155 538 aaKnown RBP eCLIP9.43□□□□□ -0.9
CPEB4-201ENST00000265085 SFSWAPQ12872 951 aaKnown RBP9.43□□□□□ -0.9
CPEB4-201ENST00000265085 C6orf163Q5TEZ5 329 aa9.43□□□□□ -0.9
CPEB4-201ENST00000265085 CCDC174Q6PII3 467 aa9.43□□□□□ -0.9
CPEB4-201ENST00000265085 LCA5Q86VQ0 697 aa9.43□□□□□ -0.9
CPEB4-201ENST00000265085 CCDC83Q8IWF9 413 aa9.43□□□□□ -0.9
CPEB4-201ENST00000265085 UPF3BQ9BZI7 483 aaKnown RBP9.43□□□□□ -0.9
CPEB4-201ENST00000265085 KAT6BQ8WYB5 2073 aa9.43□□□□□ -0.9
CPEB4-201ENST00000265085 CYP2C19P33261 490 aa9.43□□□□□ -0.9
CPEB4-201ENST00000265085 PROCA1Q8NCQ7 364 aaPredicted RBP9.43□□□□□ -0.9
CPEB4-201ENST00000265085 HSF2BPO75031 334 aa9.43□□□□□ -0.9
CPEB4-201ENST00000265085 MYLK4Q86YV6 388 aaPredicted RBP9.43□□□□□ -0.9
CPEB4-201ENST00000265085 FAM200AQ8TCP9 573 aa9.43□□□□□ -0.9
CPEB4-201ENST00000265085 CEP63Q96MT8 703 aa9.43□□□□□ -0.9
CPEB4-201ENST00000265085 PRDM16Q9HAZ2 1276 aa9.43□□□□□ -0.9
CPEB4-201ENST00000265085 SPECC1Q5M775 1068 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms