RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 RFC4P35249 363 aa11.07□□□□□ -0.64
ERCC8-201ENST00000265038 EIF4A1P60842 406 aaKnown RBP11.07□□□□□ -0.64
ERCC8-201ENST00000265038 GYS1P13807 737 aa11.06□□□□□ -0.64
ERCC8-201ENST00000265038 CANXP27824 592 aaKnown RBP11.06□□□□□ -0.64
ERCC8-201ENST00000265038 FHDC1Q9C0D6 1143 aaPredicted RBP11.06□□□□□ -0.64
ERCC8-201ENST00000265038 SRP68Q9UHB9 627 aaKnown RBP11.06□□□□□ -0.64
ERCC8-201ENST00000265038 TJP1Q07157 1748 aa11.06□□□□□ -0.64
ERCC8-201ENST00000265038 QSER1Q2KHR3 1735 aa11.06□□□□□ -0.64
ERCC8-201ENST00000265038 TUBGCP6Q96RT7 1819 aa11.06□□□□□ -0.64
ERCC8-201ENST00000265038 BABAM1Q9NWV8 329 aa11.06□□□□□ -0.64
ERCC8-201ENST00000265038 TSPYL4Q9UJ04 414 aa11.06□□□□□ -0.64
ERCC8-201ENST00000265038 CICQ96RK0 1608 aaPredicted RBP11.06□□□□□ -0.64
ERCC8-201ENST00000265038 SIPA1L3O60292 1781 aaPredicted RBP11.05□□□□□ -0.64
ERCC8-201ENST00000265038 CHL1O00533 1208 aa11.05□□□□□ -0.64
ERCC8-201ENST00000265038 GIGYF1O75420 1035 aaPredicted RBP11.05□□□□□ -0.64
ERCC8-201ENST00000265038 EIF5P55010 431 aaKnown RBP11.05□□□□□ -0.64
ERCC8-201ENST00000265038 SYT17Q9BSW7 474 aa11.05□□□□□ -0.64
ERCC8-201ENST00000265038 USP42Q9H9J4 1324 aaKnown RBP11.05□□□□□ -0.64
ERCC8-201ENST00000265038 SENP3-EIF4A1A0A087X0R7 540 aa11.04□□□□□ -0.64
ERCC8-201ENST00000265038 NLGN1Q8N2Q7 840 aa11.04□□□□□ -0.64
ERCC8-201ENST00000265038 COL5A3P25940 1745 aaPredicted RBP11.04□□□□□ -0.64
ERCC8-201ENST00000265038 UBR3Q6ZT12 1888 aa11.04□□□□□ -0.64
ERCC8-201ENST00000265038 UBR2Q8IWV8 1755 aa11.04□□□□□ -0.64
ERCC8-201ENST00000265038 PIP4K2AP48426 406 aaPredicted RBP11.04□□□□□ -0.64
ERCC8-201ENST00000265038 MMP10P09238 476 aa11.03□□□□□ -0.64
ERCC8-201ENST00000265038 IL6STP40189 918 aaPredicted RBP11.03□□□□□ -0.64
ERCC8-201ENST00000265038 FKBP8Q14318 412 aa11.03□□□□□ -0.64
ERCC8-201ENST00000265038 USPL1Q5W0Q7 1092 aa11.03□□□□□ -0.64
ERCC8-201ENST00000265038 FAM9BQ8IZU0 186 aa11.03□□□□□ -0.64
ERCC8-201ENST00000265038 NARFQ9UHQ1 456 aa11.03□□□□□ -0.64
ERCC8-201ENST00000265038 LAS1LQ9Y4W2 734 aaKnown RBP11.03□□□□□ -0.64
ERCC8-201ENST00000265038 COL15A1P39059 1388 aa11.03□□□□□ -0.64
ERCC8-201ENST00000265038 MYH14Q7Z406 1995 aaKnown RBP11.03□□□□□ -0.64
ERCC8-201ENST00000265038 NBPF26B4DH59 902 aa11.02□□□□□ -0.64
ERCC8-201ENST00000265038 ZNF853P0CG23 659 aa11.02□□□□□ -0.64
ERCC8-201ENST00000265038 NBPF10Q6P3W6 841 aaKnown RBP11.02□□□□□ -0.64
ERCC8-201ENST00000265038 NBPF15Q8N660 670 aa11.02□□□□□ -0.64
ERCC8-201ENST00000265038 BCL2L12Q9HB09 334 aa11.02□□□□□ -0.64
ERCC8-201ENST00000265038 ZPR1O75312 459 aa11.02□□□□□ -0.65
ERCC8-201ENST00000265038 CFAP44Q96MT7 982 aa11.02□□□□□ -0.65
ERCC8-201ENST00000265038 VIRMAQ69YN4 1812 aaKnown RBP11.01□□□□□ -0.65
ERCC8-201ENST00000265038 A0A087WZG4 1122 aa11.01□□□□□ -0.65
ERCC8-201ENST00000265038 TM4SF1P30408 202 aa11.01□□□□□ -0.65
ERCC8-201ENST00000265038 CCDC27Q2M243 656 aa11.01□□□□□ -0.65
ERCC8-201ENST00000265038 KRT24Q2M2I5 525 aa11.01□□□□□ -0.65
ERCC8-201ENST00000265038 KLHL34Q8N239 644 aa11.01□□□□□ -0.65
ERCC8-201ENST00000265038 TBC1D2BQ9UPU7 963 aa11.01□□□□□ -0.65
ERCC8-201ENST00000265038 ZNF330Q9Y3S2 320 aaPredicted RBP11.01□□□□□ -0.65
ERCC8-201ENST00000265038 DLG5Q8TDM6 1919 aa11.01□□□□□ -0.65
ERCC8-201ENST00000265038 COL24A1Q17RW2 1714 aa11.01□□□□□ -0.65
ERCC8-201ENST00000265038 NCBP3Q53F19 620 aaKnown RBP11.01□□□□□ -0.65
ERCC8-201ENST00000265038 WWC1Q8IX03 1113 aa11.01□□□□□ -0.65
ERCC8-201ENST00000265038 NLGN2Q8NFZ4 835 aa11.01□□□□□ -0.65
ERCC8-201ENST00000265038 MBIPQ9NS73 344 aa11.01□□□□□ -0.65
ERCC8-201ENST00000265038 DDR1Q08345 913 aa11□□□□□ -0.65
ERCC8-201ENST00000265038 IFT57Q9NWB7 429 aa11□□□□□ -0.65
ERCC8-201ENST00000265038 CAMTA2O94983 1202 aa10.99□□□□□ -0.65
ERCC8-201ENST00000265038 DZIP3Q86Y13 1208 aaKnown RBP10.99□□□□□ -0.65
ERCC8-201ENST00000265038 CD2APQ9Y5K6 639 aa10.99□□□□□ -0.65
ERCC8-201ENST00000265038 CCER2I3L3R5 266 aa10.99□□□□□ -0.65
ERCC8-201ENST00000265038 EIF2S2P20042 333 aaKnown RBP10.99□□□□□ -0.65
ERCC8-201ENST00000265038 GNAI1P63096 354 aa10.99□□□□□ -0.65
ERCC8-201ENST00000265038 CALD1Q05682 793 aaKnown RBP10.99□□□□□ -0.65
ERCC8-201ENST00000265038 NFIXQ14938 502 aa10.99□□□□□ -0.65
ERCC8-201ENST00000265038 PDIA6Q15084 440 aa10.99□□□□□ -0.65
ERCC8-201ENST00000265038 DIEXFQ68CQ4 756 aaKnown RBP10.99□□□□□ -0.65
ERCC8-201ENST00000265038 SALL2Q9Y467 1007 aaPredicted RBP10.99□□□□□ -0.65
ERCC8-201ENST00000265038 PARP3Q9Y6F1 533 aa10.99□□□□□ -0.65
ERCC8-201ENST00000265038 POLRMTO00411 1230 aaKnown RBP10.98□□□□□ -0.65
ERCC8-201ENST00000265038 NPM2Q86SE8 214 aaKnown RBP10.98□□□□□ -0.65
ERCC8-201ENST00000265038 KDM3BQ7LBC6 1761 aa10.98□□□□□ -0.65
ERCC8-201ENST00000265038 TBC1D9BQ66K14 1250 aa10.97□□□□□ -0.65
ERCC8-201ENST00000265038 LRP10Q7Z4F1 713 aa10.97□□□□□ -0.65
ERCC8-201ENST00000265038 MYL6BP14649 208 aa10.97□□□□□ -0.65
ERCC8-201ENST00000265038 NGEFQ8N5V2 710 aa10.97□□□□□ -0.65
ERCC8-201ENST00000265038 NECTIN2Q92692 538 aa10.97□□□□□ -0.65
ERCC8-201ENST00000265038 PROSER3Q2NL68 480 aa10.96□□□□□ -0.65
ERCC8-201ENST00000265038 DUSP27Q5VZP5 1158 aa10.96□□□□□ -0.65
ERCC8-201ENST00000265038 BICDL1Q6ZP65 573 aa10.96□□□□□ -0.65
ERCC8-201ENST00000265038 MIER1Q8N108 512 aa10.96□□□□□ -0.65
ERCC8-201ENST00000265038 ERBB4Q15303 1308 aa10.96□□□□□ -0.65
ERCC8-201ENST00000265038 ANXA1P04083 346 aa10.96□□□□□ -0.66
ERCC8-201ENST00000265038 SERPINB2P05120 415 aa10.96□□□□□ -0.66
ERCC8-201ENST00000265038 HOXB7P09629 217 aa10.96□□□□□ -0.66
ERCC8-201ENST00000265038 TTLL7Q6ZT98 887 aa10.96□□□□□ -0.66
ERCC8-201ENST00000265038 C8orf58Q8NAV2 365 aa10.96□□□□□ -0.66
ERCC8-201ENST00000265038 C4AP0C0L4 1744 aa10.96□□□□□ -0.66
ERCC8-201ENST00000265038 ELL2O00472 640 aaPredicted RBP10.95□□□□□ -0.66
ERCC8-201ENST00000265038 HLFQ16534 295 aa10.95□□□□□ -0.66
ERCC8-201ENST00000265038 CLEC4GQ6UXB4 293 aa10.95□□□□□ -0.66
ERCC8-201ENST00000265038 WDR63Q8IWG1 891 aa10.95□□□□□ -0.66
ERCC8-201ENST00000265038 TSR2Q969E8 191 aaKnown RBP10.95□□□□□ -0.66
ERCC8-201ENST00000265038 IL16Q14005 1332 aa10.95□□□□□ -0.66
ERCC8-201ENST00000265038 C10orf71Q711Q0 1435 aa10.94□□□□□ -0.66
ERCC8-201ENST00000265038 ERVV-1B6SEH8 477 aa10.94□□□□□ -0.66
ERCC8-201ENST00000265038 RGL2O15211 777 aa10.94□□□□□ -0.66
ERCC8-201ENST00000265038 TGFB2P61812 414 aa10.94□□□□□ -0.66
ERCC8-201ENST00000265038 HDGFL1Q5TGJ6 251 aa10.94□□□□□ -0.66
ERCC8-201ENST00000265038 TSPYL6Q8N831 410 aa10.94□□□□□ -0.66
ERCC8-201ENST00000265038 SPINK5Q9NQ38 1064 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms