RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CYP19A1P11511 503 aaPredicted RBP23.86■■□□□ 1.41
SDF4-201ENST00000263741 BABAM1Q9NWV8 329 aa23.86■■□□□ 1.41
SDF4-201ENST00000263741 USP16Q9Y5T5 823 aa23.86■■□□□ 1.41
SDF4-201ENST00000263741 PHF14O94880 888 aa23.85■■□□□ 1.41
SDF4-201ENST00000263741 PIP4K2AP48426 406 aaPredicted RBP23.85■■□□□ 1.41
SDF4-201ENST00000263741 WDR63Q8IWG1 891 aa23.85■■□□□ 1.41
SDF4-201ENST00000263741 TFCP2L1Q9NZI6 479 aa23.85■■□□□ 1.41
SDF4-201ENST00000263741 GIGYF1O75420 1035 aaPredicted RBP23.85■■□□□ 1.41
SDF4-201ENST00000263741 SNRPA1P09661 255 aaKnown RBP23.85■■□□□ 1.41
SDF4-201ENST00000263741 NGEFQ8N5V2 710 aa23.85■■□□□ 1.41
SDF4-201ENST00000263741 YTHDC1Q96MU7 727 aaKnown RBP23.85■■□□□ 1.41
SDF4-201ENST00000263741 FANCIQ9NVI1 1328 aa23.85■■□□□ 1.41
SDF4-201ENST00000263741 IL16Q14005 1332 aa23.84■■□□□ 1.41
SDF4-201ENST00000263741 CNTNAP4Q9C0A0 1308 aa23.84■■□□□ 1.41
SDF4-201ENST00000263741 ZBTB1Q9Y2K1 713 aa23.83■■□□□ 1.41
SDF4-201ENST00000263741 INTS5Q6P9B9 1019 aaKnown RBP23.83■■□□□ 1.41
SDF4-201ENST00000263741 PNPLA7Q6ZV29 1317 aa23.83■■□□□ 1.41
SDF4-201ENST00000263741 CDCA7LQ96GN5 454 aa23.82■■□□□ 1.4
SDF4-201ENST00000263741 CCDC87Q9NVE4 849 aa23.82■■□□□ 1.4
SDF4-201ENST00000263741 ELL2O00472 640 aaPredicted RBP23.82■■□□□ 1.4
SDF4-201ENST00000263741 A1BGP04217 495 aa23.82■■□□□ 1.4
SDF4-201ENST00000263741 NECTIN2Q92692 538 aa23.82■■□□□ 1.4
SDF4-201ENST00000263741 STARD3NLO95772 234 aa23.8■■□□□ 1.4
SDF4-201ENST00000263741 CANXP27824 592 aaKnown RBP23.8■■□□□ 1.4
SDF4-201ENST00000263741 C8orf58Q8NAV2 365 aa23.8■■□□□ 1.4
SDF4-201ENST00000263741 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.79■■□□□ 1.4
SDF4-201ENST00000263741 EIF2S2P20042 333 aaKnown RBP23.79■■□□□ 1.4
SDF4-201ENST00000263741 GOLGA2Q08379 1002 aa23.79■■□□□ 1.4
SDF4-201ENST00000263741 RC3H1Q5TC82 1133 aaKnown RBP23.79■■□□□ 1.4
SDF4-201ENST00000263741 TSPYL6Q8N831 410 aa23.79■■□□□ 1.4
SDF4-201ENST00000263741 TEX13AQ9BXU3 409 aaPredicted RBP23.79■■□□□ 1.4
SDF4-201ENST00000263741 ZNF330Q9Y3S2 320 aaPredicted RBP23.79■■□□□ 1.4
SDF4-201ENST00000263741 DUSP27Q5VZP5 1158 aa23.78■■□□□ 1.4
SDF4-201ENST00000263741 COL23A1Q86Y22 540 aaPredicted RBP23.78■■□□□ 1.4
SDF4-201ENST00000263741 MSH5O43196 834 aa23.77■■□□□ 1.4
SDF4-201ENST00000263741 RTCBQ9Y3I0 505 aaKnown RBP23.77■■□□□ 1.4
SDF4-201ENST00000263741 SOS1Q07889 1333 aaPredicted RBP23.76■■□□□ 1.39
SDF4-201ENST00000263741 NBPF26B4DH59 902 aa23.75■■□□□ 1.39
SDF4-201ENST00000263741 RPS6KA4O75676 772 aa23.75■■□□□ 1.39
SDF4-201ENST00000263741 NBPF10Q6P3W6 841 aaKnown RBP23.75■■□□□ 1.39
SDF4-201ENST00000263741 NBPF15Q8N660 670 aa23.75■■□□□ 1.39
SDF4-201ENST00000263741 SRCAPQ6ZRS2 3230 aa23.75■■□□□ 1.39
SDF4-201ENST00000263741 EXOSC9Q06265 439 aaKnown RBP23.75■■□□□ 1.39
SDF4-201ENST00000263741 MYH16Q9H6N6 1097 aa23.75■■□□□ 1.39
SDF4-201ENST00000263741 COL15A1P39059 1388 aa23.75■■□□□ 1.39
SDF4-201ENST00000263741 ANXA1P04083 346 aa23.74■■□□□ 1.39
SDF4-201ENST00000263741 SSFA2P28290 1259 aa23.74■■□□□ 1.39
SDF4-201ENST00000263741 SLFN5Q08AF3 891 aa23.74■■□□□ 1.39
SDF4-201ENST00000263741 BCORQ6W2J9 1755 aa23.73■■□□□ 1.39
SDF4-201ENST00000263741 SCN7AQ01118 1682 aa23.73■■□□□ 1.39
SDF4-201ENST00000263741 E9PSI1 815 aa23.72■■□□□ 1.39
SDF4-201ENST00000263741 ZBTB7AO95365 584 aa23.72■■□□□ 1.39
SDF4-201ENST00000263741 MYL6BP14649 208 aa23.72■■□□□ 1.39
SDF4-201ENST00000263741 PROSER3Q2NL68 480 aa23.72■■□□□ 1.39
SDF4-201ENST00000263741 HDGFL1Q5TGJ6 251 aa23.72■■□□□ 1.39
SDF4-201ENST00000263741 ZBED9Q6R2W3 1325 aa23.72■■□□□ 1.39
SDF4-201ENST00000263741 HMGB2P26583 209 aaKnown RBP23.72■■□□□ 1.39
SDF4-201ENST00000263741 ARHGEF1Q92888 912 aaKnown RBP23.72■■□□□ 1.39
SDF4-201ENST00000263741 TCERG1O14776 1098 aaKnown RBP23.71■■□□□ 1.39
SDF4-201ENST00000263741 TWISTNBQ3B726 338 aaPredicted RBP23.71■■□□□ 1.39
SDF4-201ENST00000263741 SRP68Q9UHB9 627 aaKnown RBP23.71■■□□□ 1.39
SDF4-201ENST00000263741 TRAPPC3LQ5T215 181 aa23.71■■□□□ 1.39
SDF4-201ENST00000263741 MSL1Q68DK7 614 aa23.71■■□□□ 1.39
SDF4-201ENST00000263741 EIF5P55010 431 aaKnown RBP23.7■■□□□ 1.38
SDF4-201ENST00000263741 CHPF2Q9P2E5 772 aa23.7■■□□□ 1.38
SDF4-201ENST00000263741 HOXB7P09629 217 aa23.69■■□□□ 1.38
SDF4-201ENST00000263741 ARXQ96QS3 562 aa23.69■■□□□ 1.38
SDF4-201ENST00000263741 IL6STP40189 918 aaPredicted RBP23.68■■□□□ 1.38
SDF4-201ENST00000263741 PDIA6Q15084 440 aa23.68■■□□□ 1.38
SDF4-201ENST00000263741 COL24A1Q17RW2 1714 aa23.68■■□□□ 1.38
SDF4-201ENST00000263741 RFC4P35249 363 aa23.68■■□□□ 1.38
SDF4-201ENST00000263741 TBC1D2BQ9UPU7 963 aa23.68■■□□□ 1.38
SDF4-201ENST00000263741 ADRA2BP18089 450 aa23.67■■□□□ 1.38
SDF4-201ENST00000263741 FLAD1Q8NFF5 587 aa23.67■■□□□ 1.38
SDF4-201ENST00000263741 ATF5Q9Y2D1 282 aaPredicted RBP23.67■■□□□ 1.38
SDF4-201ENST00000263741 NUP98P52948 1817 aa23.67■■□□□ 1.38
SDF4-201ENST00000263741 USP42Q9H9J4 1324 aaKnown RBP23.66■■□□□ 1.38
SDF4-201ENST00000263741 TRMT2AQ8IZ69 625 aaKnown RBP23.66■■□□□ 1.38
SDF4-201ENST00000263741 CACNA1FO60840 1977 aa23.65■■□□□ 1.38
SDF4-201ENST00000263741 USPL1Q5W0Q7 1092 aa23.64■■□□□ 1.38
SDF4-201ENST00000263741 LRP10Q7Z4F1 713 aa23.64■■□□□ 1.38
SDF4-201ENST00000263741 ERBB4Q15303 1308 aa23.64■■□□□ 1.37
SDF4-201ENST00000263741 VAMP4O75379 141 aa23.64■■□□□ 1.37
SDF4-201ENST00000263741 TTLL7Q6ZT98 887 aa23.63■■□□□ 1.37
SDF4-201ENST00000263741 NPM2Q86SE8 214 aaKnown RBP23.63■■□□□ 1.37
SDF4-201ENST00000263741 DZIP3Q86Y13 1208 aaKnown RBP23.63■■□□□ 1.37
SDF4-201ENST00000263741 ARFGEF2Q9Y6D5 1785 aa23.63■■□□□ 1.37
SDF4-201ENST00000263741 DDX21Q9NR30 783 aaKnown RBP eCLIP23.63■■□□□ 1.37
SDF4-201ENST00000263741 GYS1P13807 737 aa23.62■■□□□ 1.37
SDF4-201ENST00000263741 MTFR1LQ9H019 292 aa23.62■■□□□ 1.37
SDF4-201ENST00000263741 ZPR1O75312 459 aa23.61■■□□□ 1.37
SDF4-201ENST00000263741 AIMP1Q12904 312 aaKnown RBP23.61■■□□□ 1.37
SDF4-201ENST00000263741 DBF4Q9UBU7 674 aaPredicted RBP23.61■■□□□ 1.37
SDF4-201ENST00000263741 NARFQ9UHQ1 456 aa23.61■■□□□ 1.37
SDF4-201ENST00000263741 FKBP8Q14318 412 aa23.61■■□□□ 1.37
SDF4-201ENST00000263741 CCDC30Q5VVM6 783 aa23.61■■□□□ 1.37
SDF4-201ENST00000263741 BCL2L12Q9HB09 334 aa23.61■■□□□ 1.37
SDF4-201ENST00000263741 ANKRD36CQ5JPF3 1778 aa23.6■■□□□ 1.37
SDF4-201ENST00000263741 XAGE3Q8WTP9 111 aa23.6■■□□□ 1.37
SDF4-201ENST00000263741 A0A087WZG4 1122 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms