RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 INTS5Q6P9B9 1019 aaKnown RBP24.5■■□□□ 1.51
UPK3B-201ENST00000257632 KDM3BQ7LBC6 1761 aa24.49■■□□□ 1.51
UPK3B-201ENST00000257632 RFC4P35249 363 aa24.48■■□□□ 1.51
UPK3B-201ENST00000257632 ARHGEF1Q92888 912 aaKnown RBP24.48■■□□□ 1.51
UPK3B-201ENST00000257632 TSPYL4Q9UJ04 414 aa24.48■■□□□ 1.51
UPK3B-201ENST00000257632 TRIM35Q9UPQ4 493 aa24.48■■□□□ 1.51
UPK3B-201ENST00000257632 SNRPA1P09661 255 aaKnown RBP24.47■■□□□ 1.51
UPK3B-201ENST00000257632 SGIP1Q9BQI5 828 aa24.47■■□□□ 1.51
UPK3B-201ENST00000257632 ZBTB1Q9Y2K1 713 aa24.47■■□□□ 1.51
UPK3B-201ENST00000257632 CANXP27824 592 aaKnown RBP24.46■■□□□ 1.51
UPK3B-201ENST00000257632 ARXQ96QS3 562 aa24.46■■□□□ 1.51
UPK3B-201ENST00000257632 COL24A1Q17RW2 1714 aa24.46■■□□□ 1.51
UPK3B-201ENST00000257632 C4AP0C0L4 1744 aa24.45■■□□□ 1.5
UPK3B-201ENST00000257632 SOS1Q07889 1333 aaPredicted RBP24.44■■□□□ 1.5
UPK3B-201ENST00000257632 FAM9BQ8IZU0 186 aa24.44■■□□□ 1.5
UPK3B-201ENST00000257632 FHDC1Q9C0D6 1143 aaPredicted RBP24.44■■□□□ 1.5
UPK3B-201ENST00000257632 LAS1LQ9Y4W2 734 aaKnown RBP24.44■■□□□ 1.5
UPK3B-201ENST00000257632 BABAM1Q9NWV8 329 aa24.43■■□□□ 1.5
UPK3B-201ENST00000257632 USP16Q9Y5T5 823 aa24.43■■□□□ 1.5
UPK3B-201ENST00000257632 PRAMEF22A3QJZ6 481 aa24.42■■□□□ 1.5
UPK3B-201ENST00000257632 EIF4A1P60842 406 aaKnown RBP24.42■■□□□ 1.5
UPK3B-201ENST00000257632 NPM2Q86SE8 214 aaKnown RBP24.42■■□□□ 1.5
UPK3B-201ENST00000257632 KLHL34Q8N239 644 aa24.42■■□□□ 1.5
UPK3B-201ENST00000257632 ZNF330Q9Y3S2 320 aaPredicted RBP24.42■■□□□ 1.5
UPK3B-201ENST00000257632 COL15A1P39059 1388 aa24.42■■□□□ 1.5
UPK3B-201ENST00000257632 LAMB4A4D0S4 1761 aa24.4■■□□□ 1.5
UPK3B-201ENST00000257632 SENP3-EIF4A1A0A087X0R7 540 aa24.4■■□□□ 1.5
UPK3B-201ENST00000257632 ZPR1O75312 459 aa24.4■■□□□ 1.5
UPK3B-201ENST00000257632 A1BGP04217 495 aa24.4■■□□□ 1.5
UPK3B-201ENST00000257632 CALD1Q05682 793 aaKnown RBP24.4■■□□□ 1.5
UPK3B-201ENST00000257632 SYT17Q9BSW7 474 aa24.4■■□□□ 1.5
UPK3B-201ENST00000257632 NLGN1Q8N2Q7 840 aa24.39■■□□□ 1.49
UPK3B-201ENST00000257632 SRP68Q9UHB9 627 aaKnown RBP24.39■■□□□ 1.49
UPK3B-201ENST00000257632 USP42Q9H9J4 1324 aaKnown RBP24.38■■□□□ 1.49
UPK3B-201ENST00000257632 A0A087WZG4 1122 aa24.38■■□□□ 1.49
UPK3B-201ENST00000257632 GIGYF1O75420 1035 aaPredicted RBP24.38■■□□□ 1.49
UPK3B-201ENST00000257632 GYS1P13807 737 aa24.38■■□□□ 1.49
UPK3B-201ENST00000257632 DIEXFQ68CQ4 756 aaKnown RBP24.38■■□□□ 1.49
UPK3B-201ENST00000257632 IL6STP40189 918 aaPredicted RBP24.37■■□□□ 1.49
UPK3B-201ENST00000257632 EIF5P55010 431 aaKnown RBP24.37■■□□□ 1.49
UPK3B-201ENST00000257632 CHL1O00533 1208 aa24.36■■□□□ 1.49
UPK3B-201ENST00000257632 MMP10P09238 476 aa24.35■■□□□ 1.49
UPK3B-201ENST00000257632 PIP4K2AP48426 406 aaPredicted RBP24.35■■□□□ 1.49
UPK3B-201ENST00000257632 USPL1Q5W0Q7 1092 aa24.35■■□□□ 1.49
UPK3B-201ENST00000257632 CFAP44Q96MT7 982 aa24.35■■□□□ 1.49
UPK3B-201ENST00000257632 NARFQ9UHQ1 456 aa24.35■■□□□ 1.49
UPK3B-201ENST00000257632 CCER2I3L3R5 266 aa24.33■■□□□ 1.49
UPK3B-201ENST00000257632 GNAI1P63096 354 aa24.33■■□□□ 1.49
UPK3B-201ENST00000257632 CCDC27Q2M243 656 aa24.33■■□□□ 1.49
UPK3B-201ENST00000257632 IFT57Q9NWB7 429 aa24.33■■□□□ 1.49
UPK3B-201ENST00000257632 SALL2Q9Y467 1007 aaPredicted RBP24.33■■□□□ 1.49
UPK3B-201ENST00000257632 FKBP8Q14318 412 aa24.32■■□□□ 1.48
UPK3B-201ENST00000257632 TBC1D2BQ9UPU7 963 aa24.31■■□□□ 1.48
UPK3B-201ENST00000257632 PARP3Q9Y6F1 533 aa24.31■■□□□ 1.48
UPK3B-201ENST00000257632 EIF2S2P20042 333 aaKnown RBP24.3■■□□□ 1.48
UPK3B-201ENST00000257632 DZIP3Q86Y13 1208 aaKnown RBP24.3■■□□□ 1.48
UPK3B-201ENST00000257632 WWC1Q8IX03 1113 aa24.3■■□□□ 1.48
UPK3B-201ENST00000257632 MBIPQ9NS73 344 aa24.3■■□□□ 1.48
UPK3B-201ENST00000257632 NBPF26B4DH59 902 aa24.29■■□□□ 1.48
UPK3B-201ENST00000257632 NCBP3Q53F19 620 aaKnown RBP24.29■■□□□ 1.48
UPK3B-201ENST00000257632 NBPF10Q6P3W6 841 aaKnown RBP24.29■■□□□ 1.48
UPK3B-201ENST00000257632 NBPF15Q8N660 670 aa24.29■■□□□ 1.48
UPK3B-201ENST00000257632 ZNF853P0CG23 659 aa24.28■■□□□ 1.48
UPK3B-201ENST00000257632 SCN7AQ01118 1682 aa24.27■■□□□ 1.48
UPK3B-201ENST00000257632 KRT24Q2M2I5 525 aa24.27■■□□□ 1.48
UPK3B-201ENST00000257632 NGEFQ8N5V2 710 aa24.27■■□□□ 1.48
UPK3B-201ENST00000257632 CHD4Q14839 1912 aa24.27■■□□□ 1.48
UPK3B-201ENST00000257632 MYL6BP14649 208 aa24.26■■□□□ 1.47
UPK3B-201ENST00000257632 BCL2L12Q9HB09 334 aa24.26■■□□□ 1.47
UPK3B-201ENST00000257632 CD2APQ9Y5K6 639 aa24.26■■□□□ 1.47
UPK3B-201ENST00000257632 ERBB4Q15303 1308 aa24.26■■□□□ 1.47
UPK3B-201ENST00000257632 NECTIN2Q92692 538 aa24.25■■□□□ 1.47
UPK3B-201ENST00000257632 BCORQ6W2J9 1755 aa24.24■■□□□ 1.47
UPK3B-201ENST00000257632 CAMTA2O94983 1202 aa24.24■■□□□ 1.47
UPK3B-201ENST00000257632 NFIXQ14938 502 aa24.24■■□□□ 1.47
UPK3B-201ENST00000257632 BICDL1Q6ZP65 573 aa24.24■■□□□ 1.47
UPK3B-201ENST00000257632 ZNF784Q8NCA9 323 aaPredicted RBP24.24■■□□□ 1.47
UPK3B-201ENST00000257632 HOXB7P09629 217 aa24.23■■□□□ 1.47
UPK3B-201ENST00000257632 TM4SF1P30408 202 aa24.23■■□□□ 1.47
UPK3B-201ENST00000257632 DDR1Q08345 913 aa24.23■■□□□ 1.47
UPK3B-201ENST00000257632 GPR162Q16538 588 aa24.23■■□□□ 1.47
UPK3B-201ENST00000257632 DUSP27Q5VZP5 1158 aa24.23■■□□□ 1.47
UPK3B-201ENST00000257632 PELP1Q8IZL8 1130 aaKnown RBP24.23■■□□□ 1.47
UPK3B-201ENST00000257632 MIER1Q8N108 512 aa24.23■■□□□ 1.47
UPK3B-201ENST00000257632 NLGN2Q8NFZ4 835 aa24.23■■□□□ 1.47
UPK3B-201ENST00000257632 ZNF652Q9Y2D9 606 aa24.23■■□□□ 1.47
UPK3B-201ENST00000257632 IL16Q14005 1332 aa24.22■■□□□ 1.47
UPK3B-201ENST00000257632 POLRMTO00411 1230 aaKnown RBP24.21■■□□□ 1.47
UPK3B-201ENST00000257632 HDGFL1Q5TGJ6 251 aa24.21■■□□□ 1.47
UPK3B-201ENST00000257632 TBC1D9BQ66K14 1250 aa24.21■■□□□ 1.47
UPK3B-201ENST00000257632 KIF6Q6ZMV9 814 aa24.21■■□□□ 1.47
UPK3B-201ENST00000257632 WDR63Q8IWG1 891 aa24.21■■□□□ 1.47
UPK3B-201ENST00000257632 TSR2Q969E8 191 aaKnown RBP24.2■■□□□ 1.46
UPK3B-201ENST00000257632 UTRNP46939 3433 aa24.19■■□□□ 1.46
UPK3B-201ENST00000257632 ELL2O00472 640 aaPredicted RBP24.19■■□□□ 1.46
UPK3B-201ENST00000257632 C10orf71Q711Q0 1435 aa24.18■■□□□ 1.46
UPK3B-201ENST00000257632 ANXA1P04083 346 aa24.18■■□□□ 1.46
UPK3B-201ENST00000257632 SERPINB2P05120 415 aa24.18■■□□□ 1.46
UPK3B-201ENST00000257632 CLEC4GQ6UXB4 293 aa24.18■■□□□ 1.46
UPK3B-201ENST00000257632 SETDB2Q96T68 719 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms