RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 GOLIM4O00461 696 aa7.8□□□□□ -1.16
CSMD2-201ENST00000241312 UBE4AQ14139 1066 aa7.8□□□□□ -1.16
CSMD2-201ENST00000241312 A0A087WZG4 1122 aa7.8□□□□□ -1.16
CSMD2-201ENST00000241312 MPHOSPH10O00566 681 aaKnown RBP7.8□□□□□ -1.16
CSMD2-201ENST00000241312 ALDH1L2Q3SY69 923 aa7.8□□□□□ -1.16
CSMD2-201ENST00000241312 NSD3Q9BZ95 1437 aa7.8□□□□□ -1.16
CSMD2-201ENST00000241312 KIF14Q15058 1648 aa7.8□□□□□ -1.16
CSMD2-201ENST00000241312 IVLP07476 585 aa7.79□□□□□ -1.16
CSMD2-201ENST00000241312 KRT222Q8N1A0 295 aa7.79□□□□□ -1.16
CSMD2-201ENST00000241312 ZHX1Q9UKY1 873 aaPredicted RBP7.79□□□□□ -1.16
CSMD2-201ENST00000241312 TMOD2Q9NZR1 351 aa7.79□□□□□ -1.16
CSMD2-201ENST00000241312 AKAP2Q9Y2D5 859 aa7.79□□□□□ -1.16
CSMD2-201ENST00000241312 LIMCH1Q9UPQ0 1083 aa7.79□□□□□ -1.16
CSMD2-201ENST00000241312 HLTFQ14527 1009 aaKnown RBP eCLIP7.79□□□□□ -1.16
CSMD2-201ENST00000241312 RBM5P52756 815 aaKnown RBP eCLIP7.79□□□□□ -1.16
CSMD2-201ENST00000241312 SREK1Q8WXA9 508 aaKnown RBP7.79□□□□□ -1.16
CSMD2-201ENST00000241312 CCDC97Q96F63 343 aaPredicted RBP7.79□□□□□ -1.16
CSMD2-201ENST00000241312 NSRP1Q9H0G5 558 aaKnown RBP7.79□□□□□ -1.16
CSMD2-201ENST00000241312 IKBKGQ9Y6K9 419 aa7.79□□□□□ -1.16
CSMD2-201ENST00000241312 PPP4R3BQ5MIZ7 849 aa7.79□□□□□ -1.16
CSMD2-201ENST00000241312 MAATS1Q7Z4T9 603 aa7.79□□□□□ -1.16
CSMD2-201ENST00000241312 RNF41Q9H4P4 317 aaPredicted RBP7.79□□□□□ -1.16
CSMD2-201ENST00000241312 CCDC12Q8WUD4 166 aaPredicted RBP7.79□□□□□ -1.16
CSMD2-201ENST00000241312 GTF2F1P35269 517 aaKnown RBP eCLIP7.79□□□□□ -1.16
CSMD2-201ENST00000241312 TICAM2Q86XR7 235 aa7.79□□□□□ -1.16
CSMD2-201ENST00000241312 CTCFLQ8NI51 663 aaPredicted RBP7.79□□□□□ -1.16
CSMD2-201ENST00000241312 LRPPRCP42704 1394 aaKnown RBP7.79□□□□□ -1.16
CSMD2-201ENST00000241312 TNNT1P13805 278 aa7.79□□□□□ -1.16
CSMD2-201ENST00000241312 ARAP1Q96P48 1450 aa7.79□□□□□ -1.16
CSMD2-201ENST00000241312 BTBD11A6QL63 1104 aa7.79□□□□□ -1.16
CSMD2-201ENST00000241312 IDH1O75874 414 aaKnown RBP7.79□□□□□ -1.16
CSMD2-201ENST00000241312 DDX54Q8TDD1 881 aaKnown RBP7.79□□□□□ -1.16
CSMD2-201ENST00000241312 FERMT1Q9BQL6 677 aa7.79□□□□□ -1.16
CSMD2-201ENST00000241312 NCAPD3P42695 1498 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 HSPA4P34932 840 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.78□□□□□ -1.16
CSMD2-201ENST00000241312 SLC12A7Q9Y666 1083 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 RAD54L2Q9Y4B4 1467 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 URI1O94763 535 aaPredicted RBP7.78□□□□□ -1.16
CSMD2-201ENST00000241312 GRIN2BQ13224 1484 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 CCDC194A0A1B0GVG4 234 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 ESCO1Q5FWF5 840 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 TNPO1Q92973 898 aaKnown RBP7.78□□□□□ -1.16
CSMD2-201ENST00000241312 TIGD1Q96MW7 591 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 SYNJ1O43426 1573 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 RASAL2Q9UJF2 1139 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 EPRSP07814 1512 aaKnown RBP7.78□□□□□ -1.16
CSMD2-201ENST00000241312 LARP1Q6PKG0 1096 aaKnown RBP7.78□□□□□ -1.16
CSMD2-201ENST00000241312 STMN4Q9H169 189 aaPredicted RBP7.78□□□□□ -1.16
CSMD2-201ENST00000241312 SNW1Q13573 536 aaKnown RBP7.78□□□□□ -1.16
CSMD2-201ENST00000241312 TMEM57Q8N5G2 664 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 IGF1RP08069 1367 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 RBM25P49756 843 aaKnown RBP7.78□□□□□ -1.16
CSMD2-201ENST00000241312 NBPF1Q3BBV0 1214 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 PLVAPQ9BX97 442 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 TTC21AQ8NDW8 1320 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 FERP16591 822 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 KIF5BP33176 963 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 SPECC1Q5M775 1068 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 CUL5Q93034 780 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 ZNF692Q9BU19 519 aaPredicted RBP7.78□□□□□ -1.16
CSMD2-201ENST00000241312 TMC6Q7Z403 805 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 CTNNA2P26232 953 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 LMAN1P49257 510 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 MNAT1P51948 309 aa7.78□□□□□ -1.16
CSMD2-201ENST00000241312 UBA5Q9GZZ9 404 aa7.77□□□□□ -1.16
CSMD2-201ENST00000241312 SMARCA5O60264 1052 aaPredicted RBP7.77□□□□□ -1.17
CSMD2-201ENST00000241312 NAPBQ9H115 298 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 USP25Q9UHP3 1055 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 TDRD12Q587J7 1177 aaKnown RBP7.77□□□□□ -1.17
CSMD2-201ENST00000241312 CKAP4Q07065 602 aaKnown RBP7.77□□□□□ -1.17
CSMD2-201ENST00000241312 CFAP70Q5T0N1 1121 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 CKAP2LQ8IYA6 745 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 FSIP1Q8NA03 581 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 EHMT1Q9H9B1 1298 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 MYL6BP14649 208 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 HMG20BQ9P0W2 317 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 RPGRIP1LQ68CZ1 1315 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 ADCY5O95622 1261 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 NFE2L2Q16236 605 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 IFI16Q16666 785 aaKnown RBP7.77□□□□□ -1.17
CSMD2-201ENST00000241312 CUL7Q14999 1698 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 CDK19Q9BWU1 502 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 CFAP57Q96MR6 1250 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 CCDC172P0C7W6 258 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 ACTN2P35609 894 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 BMS1Q14692 1282 aaKnown RBP7.77□□□□□ -1.17
CSMD2-201ENST00000241312 STRN4Q9NRL3 753 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 UBE2HP62256 183 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 CEP135Q66GS9 1140 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 MSL1Q68DK7 614 aa7.77□□□□□ -1.17
CSMD2-201ENST00000241312 GRIPAP1Q4V328 841 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 KANK3Q6NY19 840 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 STXBP4Q6ZWJ1 553 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 TUBB4AP04350 444 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 USP5P45974 858 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 CAMSAP2Q08AD1 1489 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 SPDYE4A6NLX3 237 aa7.76□□□□□ -1.17
CSMD2-201ENST00000241312 SRRTQ9BXP5 876 aaKnown RBP7.76□□□□□ -1.17
CSMD2-201ENST00000241312 EXOC6BQ9Y2D4 811 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms