RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 PPP1R1BQ9UD71 204 aaPredicted RBP25.11■■□□□ 1.61
CENPA-201ENST00000233505 QSER1Q2KHR3 1735 aa25.11■■□□□ 1.61
CENPA-201ENST00000233505 RPS6KA4O75676 772 aa25.1■■□□□ 1.61
CENPA-201ENST00000233505 WDR63Q8IWG1 891 aa25.1■■□□□ 1.61
CENPA-201ENST00000233505 SLC16A10Q8TF71 515 aa25.1■■□□□ 1.61
CENPA-201ENST00000233505 RTCBQ9Y3I0 505 aaKnown RBP25.1■■□□□ 1.61
CENPA-201ENST00000233505 GIGYF1O75420 1035 aaPredicted RBP25.09■■□□□ 1.61
CENPA-201ENST00000233505 ATF5Q9Y2D1 282 aaPredicted RBP25.09■■□□□ 1.61
CENPA-201ENST00000233505 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.08■■□□□ 1.61
CENPA-201ENST00000233505 AMIGO3Q86WK7 504 aa25.08■■□□□ 1.61
CENPA-201ENST00000233505 COL23A1Q86Y22 540 aaPredicted RBP25.07■■□□□ 1.6
CENPA-201ENST00000233505 MBIPQ9NS73 344 aa25.07■■□□□ 1.6
CENPA-201ENST00000233505 LAS1LQ9Y4W2 734 aaKnown RBP25.07■■□□□ 1.6
CENPA-201ENST00000233505 SOS1Q07889 1333 aaPredicted RBP25.07■■□□□ 1.6
CENPA-201ENST00000233505 ZNF521Q96K83 1311 aa25.07■■□□□ 1.6
CENPA-201ENST00000233505 ZBTB1Q9Y2K1 713 aa25.06■■□□□ 1.6
CENPA-201ENST00000233505 HOXB7P09629 217 aa25.05■■□□□ 1.6
CENPA-201ENST00000233505 USP16Q9Y5T5 823 aa25.05■■□□□ 1.6
CENPA-201ENST00000233505 SENP3-EIF4A1A0A087X0R7 540 aa25.04■■□□□ 1.6
CENPA-201ENST00000233505 PRAMEF22A3QJZ6 481 aa25.04■■□□□ 1.6
CENPA-201ENST00000233505 PTGER2P43116 358 aa25.04■■□□□ 1.6
CENPA-201ENST00000233505 MTFR1LQ9H019 292 aa25.04■■□□□ 1.6
CENPA-201ENST00000233505 UBR3Q6ZT12 1888 aa25.04■■□□□ 1.6
CENPA-201ENST00000233505 PHF14O94880 888 aa25.03■■□□□ 1.6
CENPA-201ENST00000233505 TRAPPC3LQ5T215 181 aa25.03■■□□□ 1.6
CENPA-201ENST00000233505 SALL2Q9Y467 1007 aaPredicted RBP25.03■■□□□ 1.6
CENPA-201ENST00000233505 TUBGCP6Q96RT7 1819 aa25.02■■□□□ 1.6
CENPA-201ENST00000233505 IL6STP40189 918 aaPredicted RBP25.02■■□□□ 1.6
CENPA-201ENST00000233505 ERBB4Q15303 1308 aa25.02■■□□□ 1.6
CENPA-201ENST00000233505 EIF5P55010 431 aaKnown RBP25.01■■□□□ 1.59
CENPA-201ENST00000233505 MYH14Q7Z406 1995 aaKnown RBP25■■□□□ 1.59
CENPA-201ENST00000233505 ARHGEF1Q92888 912 aaKnown RBP25■■□□□ 1.59
CENPA-201ENST00000233505 COL15A1P39059 1388 aa25■■□□□ 1.59
CENPA-201ENST00000233505 A1BGP04217 495 aa24.99■■□□□ 1.59
CENPA-201ENST00000233505 LAMB4A4D0S4 1761 aa24.98■■□□□ 1.59
CENPA-201ENST00000233505 A0A087WZG4 1122 aa24.98■■□□□ 1.59
CENPA-201ENST00000233505 MSH5O43196 834 aa24.98■■□□□ 1.59
CENPA-201ENST00000233505 CANXP27824 592 aaKnown RBP24.98■■□□□ 1.59
CENPA-201ENST00000233505 SMIM5Q71RC9 77 aa24.98■■□□□ 1.59
CENPA-201ENST00000233505 FANCIQ9NVI1 1328 aa24.97■■□□□ 1.59
CENPA-201ENST00000233505 RFC4P35249 363 aa24.97■■□□□ 1.59
CENPA-201ENST00000233505 KRT24Q2M2I5 525 aa24.97■■□□□ 1.59
CENPA-201ENST00000233505 MYH16Q9H6N6 1097 aa24.97■■□□□ 1.59
CENPA-201ENST00000233505 USP42Q9H9J4 1324 aaKnown RBP24.96■■□□□ 1.59
CENPA-201ENST00000233505 NBPF26B4DH59 902 aa24.96■■□□□ 1.59
CENPA-201ENST00000233505 NBPF10Q6P3W6 841 aaKnown RBP24.96■■□□□ 1.59
CENPA-201ENST00000233505 NBPF15Q8N660 670 aa24.96■■□□□ 1.59
CENPA-201ENST00000233505 SGIP1Q9BQI5 828 aa24.96■■□□□ 1.59
CENPA-201ENST00000233505 DUSP27Q5VZP5 1158 aa24.95■■□□□ 1.58
CENPA-201ENST00000233505 TSR2Q969E8 191 aaKnown RBP24.95■■□□□ 1.58
CENPA-201ENST00000233505 CHMP4AQ9BY43 222 aa24.95■■□□□ 1.58
CENPA-201ENST00000233505 GOLGA2Q08379 1002 aa24.94■■□□□ 1.58
CENPA-201ENST00000233505 NARFQ9UHQ1 456 aa24.94■■□□□ 1.58
CENPA-201ENST00000233505 NPM2Q86SE8 214 aaKnown RBP24.93■■□□□ 1.58
CENPA-201ENST00000233505 SPINK5Q9NQ38 1064 aaPredicted RBP24.93■■□□□ 1.58
CENPA-201ENST00000233505 E9PSI1 815 aa24.92■■□□□ 1.58
CENPA-201ENST00000233505 RGL2O15211 777 aa24.92■■□□□ 1.58
CENPA-201ENST00000233505 GYS1P13807 737 aa24.92■■□□□ 1.58
CENPA-201ENST00000233505 C8orf58Q8NAV2 365 aa24.92■■□□□ 1.58
CENPA-201ENST00000233505 ZPR1O75312 459 aa24.91■■□□□ 1.58
CENPA-201ENST00000233505 EIF2S2P20042 333 aaKnown RBP24.91■■□□□ 1.58
CENPA-201ENST00000233505 HDGFL1Q5TGJ6 251 aa24.91■■□□□ 1.58
CENPA-201ENST00000233505 NLGN1Q8N2Q7 840 aa24.91■■□□□ 1.58
CENPA-201ENST00000233505 FHDC1Q9C0D6 1143 aaPredicted RBP24.91■■□□□ 1.58
CENPA-201ENST00000233505 COL24A1Q17RW2 1714 aa24.9■■□□□ 1.58
CENPA-201ENST00000233505 PDIA6Q15084 440 aa24.9■■□□□ 1.58
CENPA-201ENST00000233505 C4AP0C0L4 1744 aa24.89■■□□□ 1.58
CENPA-201ENST00000233505 POLD1P28340 1107 aa24.89■■□□□ 1.58
CENPA-201ENST00000233505 PIP4K2AP48426 406 aaPredicted RBP24.89■■□□□ 1.58
CENPA-201ENST00000233505 LRP10Q7Z4F1 713 aa24.89■■□□□ 1.58
CENPA-201ENST00000233505 ARXQ96QS3 562 aa24.89■■□□□ 1.58
CENPA-201ENST00000233505 DDX21Q9NR30 783 aaKnown RBP eCLIP24.89■■□□□ 1.58
CENPA-201ENST00000233505 SRP68Q9UHB9 627 aaKnown RBP24.89■■□□□ 1.58
CENPA-201ENST00000233505 MSL1Q68DK7 614 aa24.88■■□□□ 1.57
CENPA-201ENST00000233505 ZNF330Q9Y3S2 320 aaPredicted RBP24.88■■□□□ 1.57
CENPA-201ENST00000233505 HNRNPUQ00839 825 aaKnown RBP eCLIP24.87■■□□□ 1.57
CENPA-201ENST00000233505 SLFN5Q08AF3 891 aa24.87■■□□□ 1.57
CENPA-201ENST00000233505 TWISTNBQ3B726 338 aaPredicted RBP24.87■■□□□ 1.57
CENPA-201ENST00000233505 USPL1Q5W0Q7 1092 aa24.87■■□□□ 1.57
CENPA-201ENST00000233505 DZIP3Q86Y13 1208 aaKnown RBP24.87■■□□□ 1.57
CENPA-201ENST00000233505 TSPYL6Q8N831 410 aa24.87■■□□□ 1.57
CENPA-201ENST00000233505 DBF4Q9UBU7 674 aaPredicted RBP24.87■■□□□ 1.57
CENPA-201ENST00000233505 CAMTA2O94983 1202 aa24.86■■□□□ 1.57
CENPA-201ENST00000233505 SYT17Q9BSW7 474 aa24.86■■□□□ 1.57
CENPA-201ENST00000233505 ELL2O00472 640 aaPredicted RBP24.85■■□□□ 1.57
CENPA-201ENST00000233505 BCL2L12Q9HB09 334 aa24.85■■□□□ 1.57
CENPA-201ENST00000233505 CHPF2Q9P2E5 772 aa24.85■■□□□ 1.57
CENPA-201ENST00000233505 TBC1D2BQ9UPU7 963 aa24.85■■□□□ 1.57
CENPA-201ENST00000233505 MYL6BP14649 208 aa24.84■■□□□ 1.57
CENPA-201ENST00000233505 EXOSC9Q06265 439 aaKnown RBP24.84■■□□□ 1.57
CENPA-201ENST00000233505 FKBP8Q14318 412 aa24.84■■□□□ 1.57
CENPA-201ENST00000233505 PROSER3Q2NL68 480 aa24.84■■□□□ 1.57
CENPA-201ENST00000233505 CCDC30Q5VVM6 783 aa24.84■■□□□ 1.57
CENPA-201ENST00000233505 TRMT2AQ8IZ69 625 aaKnown RBP24.84■■□□□ 1.57
CENPA-201ENST00000233505 SCN7AQ01118 1682 aa24.83■■□□□ 1.57
CENPA-201ENST00000233505 CLEC4GQ6UXB4 293 aa24.83■■□□□ 1.57
CENPA-201ENST00000233505 KLHL34Q8N239 644 aa24.83■■□□□ 1.57
CENPA-201ENST00000233505 NECTIN2Q92692 538 aa24.83■■□□□ 1.57
CENPA-201ENST00000233505 HYPKQ9NX55 129 aa24.83■■□□□ 1.57
CENPA-201ENST00000233505 ZBED9Q6R2W3 1325 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms