RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 PREX1Q8TCU6 1659 aa18.83■□□□□ 0.61
PXN-201ENST00000228307 CCT4P50991 539 aaKnown RBP18.83■□□□□ 0.6
PXN-201ENST00000228307 PLEKHO1Q53GL0 409 aaPredicted RBP18.83■□□□□ 0.6
PXN-201ENST00000228307 KIF2CQ99661 725 aa18.83■□□□□ 0.6
PXN-201ENST00000228307 USP48Q86UV5 1035 aa18.83■□□□□ 0.6
PXN-201ENST00000228307 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.83■□□□□ 0.61e-6■■□□□ 13.6
PXN-201ENST00000228307 CAMK4Q16566 473 aa18.82■□□□□ 0.6
PXN-201ENST00000228307 SPDYE4A6NLX3 237 aa18.82■□□□□ 0.6
PXN-201ENST00000228307 TOM1L2Q6ZVM7 507 aa18.82■□□□□ 0.6
PXN-201ENST00000228307 HS1BP3Q53T59 392 aa18.82■□□□□ 0.6
PXN-201ENST00000228307 GIMAP6Q6P9H5 292 aa18.82■□□□□ 0.6
PXN-201ENST00000228307 ARHGEF40Q8TER5 1519 aa18.82■□□□□ 0.6
PXN-201ENST00000228307 PPLO60437 1756 aa18.81■□□□□ 0.6
PXN-201ENST00000228307 PLEKHG1Q9ULL1 1385 aa18.81■□□□□ 0.6
PXN-201ENST00000228307 GOLGA6L19H0YKK7 550 aa18.81■□□□□ 0.6
PXN-201ENST00000228307 KCNQ3O43525 872 aa18.81■□□□□ 0.6
PXN-201ENST00000228307 PTCD1O75127 700 aaKnown RBP18.81■□□□□ 0.6
PXN-201ENST00000228307 MCM5P33992 734 aa18.81■□□□□ 0.6
PXN-201ENST00000228307 TAF7Q15545 349 aaPredicted RBP18.81■□□□□ 0.6
PXN-201ENST00000228307 TTC5Q8N0Z6 440 aa18.81■□□□□ 0.6
PXN-201ENST00000228307 FAM184AQ8NB25 1140 aa18.81■□□□□ 0.6
PXN-201ENST00000228307 PHAXQ9H814 394 aaKnown RBP18.81■□□□□ 0.6
PXN-201ENST00000228307 FLT4P35916 1363 aa18.81■□□□□ 0.6
PXN-201ENST00000228307 CCDC83Q8IWF9 413 aa18.81■□□□□ 0.6
PXN-201ENST00000228307 GPATCH3Q96I76 525 aa18.81■□□□□ 0.6
PXN-201ENST00000228307 CNPY2Q9Y2B0 182 aa18.81■□□□□ 0.6
PXN-201ENST00000228307 SETBP1Q9Y6X0 1596 aa18.81■□□□□ 0.6
PXN-201ENST00000228307 BECN2A8MW95 431 aa18.8■□□□□ 0.6
PXN-201ENST00000228307 TTC21AQ8NDW8 1320 aa18.8■□□□□ 0.6
PXN-201ENST00000228307 NPHP1O15259 732 aa18.8■□□□□ 0.6
PXN-201ENST00000228307 IFIT2P09913 472 aaKnown RBP18.8■□□□□ 0.6
PXN-201ENST00000228307 FLIIQ13045 1269 aa18.8■□□□□ 0.6
PXN-201ENST00000228307 NOLC1Q14978 699 aaKnown RBP eCLIP18.8■□□□□ 0.6
PXN-201ENST00000228307 RUFY2Q8WXA3 655 aa18.8■□□□□ 0.6
PXN-201ENST00000228307 NSFL1CQ9UNZ2 370 aaKnown RBP18.8■□□□□ 0.6
PXN-201ENST00000228307 H3BQV1 296 aa18.79■□□□□ 0.6
PXN-201ENST00000228307 IFFO2Q5TF58 517 aa18.79■□□□□ 0.6
PXN-201ENST00000228307 SPG7Q9UQ90 795 aa18.79■□□□□ 0.6
PXN-201ENST00000228307 TMEM131LA2VDJ0 1609 aa18.79■□□□□ 0.6
PXN-201ENST00000228307 CCDC183Q5T5S1 534 aa18.79■□□□□ 0.6
PXN-201ENST00000228307 CNTROBQ8N137 903 aa18.79■□□□□ 0.6
PXN-201ENST00000228307 SIL1Q9H173 461 aa18.79■□□□□ 0.6
PXN-201ENST00000228307 ESYT1Q9BSJ8 1104 aa18.79■□□□□ 0.6
PXN-201ENST00000228307 LRRFIP2Q9Y608 721 aaKnown RBP18.79■□□□□ 0.6
PXN-201ENST00000228307 GADD45BO75293 160 aaPredicted RBP18.78■□□□□ 0.6
PXN-201ENST00000228307 CASTP20810 708 aaKnown RBP18.78■□□□□ 0.6
PXN-201ENST00000228307 PDCL2Q8N4E4 241 aa18.78■□□□□ 0.6
PXN-201ENST00000228307 NLRP1Q9C000 1473 aa18.78■□□□□ 0.6
PXN-201ENST00000228307 SRGAP3O43295 1099 aa18.78■□□□□ 0.6
PXN-201ENST00000228307 CEBPZQ03701 1054 aaKnown RBP18.78■□□□□ 0.6
PXN-201ENST00000228307 PPP4R3BQ5MIZ7 849 aa18.78■□□□□ 0.6
PXN-201ENST00000228307 IGSF3O75054 1194 aa18.78■□□□□ 0.6
PXN-201ENST00000228307 STK3Q13188 491 aa18.78■□□□□ 0.6
PXN-201ENST00000228307 KCNH5Q8NCM2 988 aa18.78■□□□□ 0.6
PXN-201ENST00000228307 JAKMIP1Q96N16 626 aaKnown RBP18.78■□□□□ 0.6
PXN-201ENST00000228307 CPS1P31327 1500 aa18.77■□□□□ 0.6
PXN-201ENST00000228307 LETM1O95202 739 aaPredicted RBP18.77■□□□□ 0.6
PXN-201ENST00000228307 CCDC192P0DO97 292 aa18.77■□□□□ 0.6
PXN-201ENST00000228307 RIC3Q7Z5B4 369 aa18.77■□□□□ 0.6
PXN-201ENST00000228307 USP6P35125 1406 aa18.76■□□□□ 0.59
PXN-201ENST00000228307 LARP1BQ659C4 914 aaKnown RBP18.76■□□□□ 0.59
PXN-201ENST00000228307 IL17REQ8NFR9 667 aa18.76■□□□□ 0.59
PXN-201ENST00000228307 CHPF2Q9P2E5 772 aa18.76■□□□□ 0.59
PXN-201ENST00000228307 ADAMTS13Q76LX8 1427 aa18.76■□□□□ 0.59
PXN-201ENST00000228307 PI4KAP2A4QPH2 592 aa18.76■□□□□ 0.59
PXN-201ENST00000228307 TPD52L1Q16890 204 aaPredicted RBP18.76■□□□□ 0.59
PXN-201ENST00000228307 CKAP2LQ8IYA6 745 aa18.76■□□□□ 0.59
PXN-201ENST00000228307 PI4KAP1Q8N8J0 262 aa18.76■□□□□ 0.59
PXN-201ENST00000228307 NRDCO43847 1150 aa18.75■□□□□ 0.59
PXN-201ENST00000228307 PTPRUQ92729 1446 aa18.75■□□□□ 0.59
PXN-201ENST00000228307 NUTM2BA6NNL0 878 aaPredicted RBP18.75■□□□□ 0.59
PXN-201ENST00000228307 NUTM2EB1AL46 878 aaPredicted RBP18.75■□□□□ 0.59
PXN-201ENST00000228307 TATP17735 454 aaPredicted RBP18.75■□□□□ 0.59
PXN-201ENST00000228307 NUTM2AQ8IVF1 878 aaPredicted RBP18.75■□□□□ 0.59
PXN-201ENST00000228307 CLASRPQ8N2M8 674 aaKnown RBP18.75■□□□□ 0.59
PXN-201ENST00000228307 CCDC85AQ96PX6 553 aaPredicted RBP18.75■□□□□ 0.59
PXN-201ENST00000228307 CHL1O00533 1208 aa18.74■□□□□ 0.59
PXN-201ENST00000228307 HTATSF1O43719 755 aaKnown RBP18.74■□□□□ 0.59
PXN-201ENST00000228307 STX6O43752 255 aa18.74■□□□□ 0.59
PXN-201ENST00000228307 C19orf44Q9H6X5 657 aa18.74■□□□□ 0.59
PXN-201ENST00000228307 MYOM1P52179 1685 aa18.73■□□□□ 0.59
PXN-201ENST00000228307 CD163L1Q9NR16 1453 aa18.73■□□□□ 0.59
PXN-201ENST00000228307 C16orf45Q96MC5 204 aaPredicted RBP18.73■□□□□ 0.59
PXN-201ENST00000228307 PALD1Q9ULE6 856 aa18.73■□□□□ 0.59
PXN-201ENST00000228307 MSH6P52701 1360 aa18.73■□□□□ 0.59
PXN-201ENST00000228307 ZNF500O60304 480 aaPredicted RBP18.73■□□□□ 0.59
PXN-201ENST00000228307 CPA1P15085 419 aa18.73■□□□□ 0.59
PXN-201ENST00000228307 TNMDQ9H2S6 317 aa18.73■□□□□ 0.59
PXN-201ENST00000228307 CYP46A1Q9Y6A2 500 aa18.73■□□□□ 0.59
PXN-201ENST00000228307 PIP4K2BP78356 416 aa18.72■□□□□ 0.59
PXN-201ENST00000228307 PRPF40BQ6NWY9 871 aaKnown RBP18.72■□□□□ 0.59
PXN-201ENST00000228307 ABCC4O15439 1325 aa18.72■□□□□ 0.59
PXN-201ENST00000228307 SRCIN1Q9C0H9 1055 aa18.72■□□□□ 0.59
PXN-201ENST00000228307 PDRG1Q9NUG6 133 aa18.72■□□□□ 0.59
PXN-201ENST00000228307 TFIP11Q9UBB9 837 aaKnown RBP18.72■□□□□ 0.59
PXN-201ENST00000228307 ZC3H13Q5T200 1668 aaKnown RBP18.72■□□□□ 0.59
PXN-201ENST00000228307 NCBP3Q53F19 620 aaKnown RBP18.72■□□□□ 0.59
PXN-201ENST00000228307 SIRT1Q96EB6 747 aa18.71■□□□□ 0.59
PXN-201ENST00000228307 PTPRCP08575 1304 aa18.71■□□□□ 0.59
PXN-201ENST00000228307 PRAMEF22A3QJZ6 481 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms