RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 CALD1Q05682 793 aaKnown RBP19.17■□□□□ 0.66
PCOLCE-201ENST00000223061 SPON1Q9HCB6 807 aa19.17■□□□□ 0.66
PCOLCE-201ENST00000223061 ZBTB1Q9Y2K1 713 aa19.17■□□□□ 0.66
PCOLCE-201ENST00000223061 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
PCOLCE-201ENST00000223061 CCDC27Q2M243 656 aa19.17■□□□□ 0.66
PCOLCE-201ENST00000223061 TRAPPC3LQ5T215 181 aa19.17■□□□□ 0.66
PCOLCE-201ENST00000223061 WWC1Q8IX03 1113 aa19.17■□□□□ 0.66
PCOLCE-201ENST00000223061 MTFR1LQ9H019 292 aa19.17■□□□□ 0.66
PCOLCE-201ENST00000223061 USP16Q9Y5T5 823 aa19.17■□□□□ 0.66
PCOLCE-201ENST00000223061 KDM3BQ7LBC6 1761 aa19.16■□□□□ 0.66
PCOLCE-201ENST00000223061 CFAP44Q96MT7 982 aa19.16■□□□□ 0.66
PCOLCE-201ENST00000223061 QSER1Q2KHR3 1735 aa19.15■□□□□ 0.66
PCOLCE-201ENST00000223061 A1BGP04217 495 aa19.15■□□□□ 0.66
PCOLCE-201ENST00000223061 MSL1Q68DK7 614 aa19.15■□□□□ 0.66
PCOLCE-201ENST00000223061 SLC16A10Q8TF71 515 aa19.15■□□□□ 0.66
PCOLCE-201ENST00000223061 UBR3Q6ZT12 1888 aa19.14■□□□□ 0.66
PCOLCE-201ENST00000223061 GIGYF1O75420 1035 aaPredicted RBP19.14■□□□□ 0.66
PCOLCE-201ENST00000223061 ARHGEF1Q92888 912 aaKnown RBP19.14■□□□□ 0.66
PCOLCE-201ENST00000223061 MBIPQ9NS73 344 aa19.14■□□□□ 0.66
PCOLCE-201ENST00000223061 IFT57Q9NWB7 429 aa19.14■□□□□ 0.66
PCOLCE-201ENST00000223061 SOS1Q07889 1333 aaPredicted RBP19.14■□□□□ 0.65
PCOLCE-201ENST00000223061 ADRA2BP18089 450 aa19.14■□□□□ 0.65
PCOLCE-201ENST00000223061 GNAI1P63096 354 aa19.14■□□□□ 0.65
PCOLCE-201ENST00000223061 ZNF330Q9Y3S2 320 aaPredicted RBP19.14■□□□□ 0.65
PCOLCE-201ENST00000223061 MYH14Q7Z406 1995 aaKnown RBP19.13■□□□□ 0.65
PCOLCE-201ENST00000223061 ZNF853P0CG23 659 aa19.13■□□□□ 0.65
PCOLCE-201ENST00000223061 RFC4P35249 363 aa19.13■□□□□ 0.65
PCOLCE-201ENST00000223061 PIP4K2AP48426 406 aaPredicted RBP19.13■□□□□ 0.65
PCOLCE-201ENST00000223061 NCBP3Q53F19 620 aaKnown RBP19.13■□□□□ 0.65
PCOLCE-201ENST00000223061 KRT24Q2M2I5 525 aa19.12■□□□□ 0.65
PCOLCE-201ENST00000223061 PTGER2P43116 358 aa19.11■□□□□ 0.65
PCOLCE-201ENST00000223061 COL15A1P39059 1388 aa19.1■□□□□ 0.65
PCOLCE-201ENST00000223061 SRP68Q9UHB9 627 aaKnown RBP19.1■□□□□ 0.65
PCOLCE-201ENST00000223061 NGEFQ8N5V2 710 aa19.09■□□□□ 0.65
PCOLCE-201ENST00000223061 TSR2Q969E8 191 aaKnown RBP19.09■□□□□ 0.65
PCOLCE-201ENST00000223061 PPP1R1BQ9UD71 204 aaPredicted RBP19.09■□□□□ 0.65
PCOLCE-201ENST00000223061 LRP5O75197 1615 aa19.09■□□□□ 0.65
PCOLCE-201ENST00000223061 EIF2S2P20042 333 aaKnown RBP19.08■□□□□ 0.65
PCOLCE-201ENST00000223061 IL6STP40189 918 aaPredicted RBP19.08■□□□□ 0.65
PCOLCE-201ENST00000223061 EIF5P55010 431 aaKnown RBP19.08■□□□□ 0.65
PCOLCE-201ENST00000223061 NPM2Q86SE8 214 aaKnown RBP19.08■□□□□ 0.65
PCOLCE-201ENST00000223061 ARXQ96QS3 562 aa19.08■□□□□ 0.65
PCOLCE-201ENST00000223061 NBPF26B4DH59 902 aa19.08■□□□□ 0.64
PCOLCE-201ENST00000223061 POLD1P28340 1107 aa19.08■□□□□ 0.64
PCOLCE-201ENST00000223061 NBPF10Q6P3W6 841 aaKnown RBP19.08■□□□□ 0.64
PCOLCE-201ENST00000223061 WDR63Q8IWG1 891 aa19.08■□□□□ 0.64
PCOLCE-201ENST00000223061 NBPF15Q8N660 670 aa19.08■□□□□ 0.64
PCOLCE-201ENST00000223061 SGIP1Q9BQI5 828 aa19.08■□□□□ 0.64
PCOLCE-201ENST00000223061 IL16Q14005 1332 aa19.08■□□□□ 0.64
PCOLCE-201ENST00000223061 USP42Q9H9J4 1324 aaKnown RBP19.08■□□□□ 0.64
PCOLCE-201ENST00000223061 ZPR1O75312 459 aa19.07■□□□□ 0.64
PCOLCE-201ENST00000223061 NECTIN2Q92692 538 aa19.07■□□□□ 0.64
PCOLCE-201ENST00000223061 A0A087WZG4 1122 aa19.06■□□□□ 0.64
PCOLCE-201ENST00000223061 GYS1P13807 737 aa19.06■□□□□ 0.64
PCOLCE-201ENST00000223061 DUSP27Q5VZP5 1158 aa19.05■□□□□ 0.64
PCOLCE-201ENST00000223061 USPL1Q5W0Q7 1092 aa19.05■□□□□ 0.64
PCOLCE-201ENST00000223061 NARFQ9UHQ1 456 aa19.05■□□□□ 0.64
PCOLCE-201ENST00000223061 TBC1D2BQ9UPU7 963 aa19.05■□□□□ 0.64
PCOLCE-201ENST00000223061 ELL2O00472 640 aaPredicted RBP19.05■□□□□ 0.64
PCOLCE-201ENST00000223061 MYL6BP14649 208 aa19.05■□□□□ 0.64
PCOLCE-201ENST00000223061 C4AP0C0L4 1744 aa19.04■□□□□ 0.64
PCOLCE-201ENST00000223061 LAMB4A4D0S4 1761 aa19.04■□□□□ 0.64
PCOLCE-201ENST00000223061 FKBP8Q14318 412 aa19.04■□□□□ 0.64
PCOLCE-201ENST00000223061 NLGN1Q8N2Q7 840 aa19.04■□□□□ 0.64
PCOLCE-201ENST00000223061 C8orf58Q8NAV2 365 aa19.04■□□□□ 0.64
PCOLCE-201ENST00000223061 SPINK5Q9NQ38 1064 aaPredicted RBP19.03■□□□□ 0.64
PCOLCE-201ENST00000223061 ZNF521Q96K83 1311 aa19.03■□□□□ 0.64
PCOLCE-201ENST00000223061 FANCIQ9NVI1 1328 aa19.03■□□□□ 0.64
PCOLCE-201ENST00000223061 MMP10P09238 476 aa19.03■□□□□ 0.64
PCOLCE-201ENST00000223061 HOXB7P09629 217 aa19.03■□□□□ 0.64
PCOLCE-201ENST00000223061 HDGFL1Q5TGJ6 251 aa19.03■□□□□ 0.64
PCOLCE-201ENST00000223061 DZIP3Q86Y13 1208 aaKnown RBP19.03■□□□□ 0.64
PCOLCE-201ENST00000223061 ANXA1P04083 346 aa19.02■□□□□ 0.63
PCOLCE-201ENST00000223061 KLHL34Q8N239 644 aa19.02■□□□□ 0.63
PCOLCE-201ENST00000223061 ERBB4Q15303 1308 aa19.01■□□□□ 0.63
PCOLCE-201ENST00000223061 PROSER3Q2NL68 480 aa19.01■□□□□ 0.63
PCOLCE-201ENST00000223061 BCL2L12Q9HB09 334 aa19.01■□□□□ 0.63
PCOLCE-201ENST00000223061 PDIA6Q15084 440 aa19■□□□□ 0.63
PCOLCE-201ENST00000223061 TSPYL6Q8N831 410 aa19■□□□□ 0.63
PCOLCE-201ENST00000223061 MYH16Q9H6N6 1097 aa19■□□□□ 0.63
PCOLCE-201ENST00000223061 CAMTA2O94983 1202 aa19■□□□□ 0.63
PCOLCE-201ENST00000223061 GOLGA2Q08379 1002 aa19■□□□□ 0.63
PCOLCE-201ENST00000223061 CHPF2Q9P2E5 772 aa19■□□□□ 0.63
PCOLCE-201ENST00000223061 FHDC1Q9C0D6 1143 aaPredicted RBP18.99■□□□□ 0.63
PCOLCE-201ENST00000223061 BICDL1Q6ZP65 573 aa18.98■□□□□ 0.63
PCOLCE-201ENST00000223061 COL24A1Q17RW2 1714 aa18.98■□□□□ 0.63
PCOLCE-201ENST00000223061 KIF6Q6ZMV9 814 aa18.97■□□□□ 0.63
PCOLCE-201ENST00000223061 TTLL7Q6ZT98 887 aa18.97■□□□□ 0.63
PCOLCE-201ENST00000223061 DDX21Q9NR30 783 aaKnown RBP eCLIP18.97■□□□□ 0.63
PCOLCE-201ENST00000223061 PARP3Q9Y6F1 533 aa18.97■□□□□ 0.63
PCOLCE-201ENST00000223061 HNRNPUQ00839 825 aaKnown RBP eCLIP18.97■□□□□ 0.63
PCOLCE-201ENST00000223061 EXOSC9Q06265 439 aaKnown RBP18.97■□□□□ 0.63
PCOLCE-201ENST00000223061 DDR1Q08345 913 aa18.97■□□□□ 0.63
PCOLCE-201ENST00000223061 NFIXQ14938 502 aa18.97■□□□□ 0.63
PCOLCE-201ENST00000223061 TWISTNBQ3B726 338 aaPredicted RBP18.97■□□□□ 0.63
PCOLCE-201ENST00000223061 LRP10Q7Z4F1 713 aa18.97■□□□□ 0.63
PCOLCE-201ENST00000223061 TBC1D9BQ66K14 1250 aa18.96■□□□□ 0.63
PCOLCE-201ENST00000223061 DBF4Q9UBU7 674 aaPredicted RBP18.96■□□□□ 0.63
PCOLCE-201ENST00000223061 TM4SF1P30408 202 aa18.95■□□□□ 0.62
PCOLCE-201ENST00000223061 AIMP1Q12904 312 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms