RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 GIGYF1O75420 1035 aaPredicted RBP30.69■■■□□ 2.5
HOMER3-201ENST00000221222 GOLGA2Q08379 1002 aa30.69■■■□□ 2.5
HOMER3-201ENST00000221222 SPINK5Q9NQ38 1064 aaPredicted RBP30.69■■■□□ 2.5
HOMER3-201ENST00000221222 QSER1Q2KHR3 1735 aa30.69■■■□□ 2.5
HOMER3-201ENST00000221222 TUBGCP6Q96RT7 1819 aa30.69■■■□□ 2.5
HOMER3-201ENST00000221222 DCAF8L1A6NGE4 600 aa30.68■■■□□ 2.5
HOMER3-201ENST00000221222 CYP19A1P11511 503 aaPredicted RBP30.68■■■□□ 2.5
HOMER3-201ENST00000221222 RC3H1Q5TC82 1133 aaKnown RBP30.68■■■□□ 2.5
HOMER3-201ENST00000221222 UBR3Q6ZT12 1888 aa30.68■■■□□ 2.5
HOMER3-201ENST00000221222 TSR2Q969E8 191 aaKnown RBP30.67■■■□□ 2.5
HOMER3-201ENST00000221222 PRAMEF22A3QJZ6 481 aa30.66■■■□□ 2.5
HOMER3-201ENST00000221222 STARD3NLO95772 234 aa30.66■■■□□ 2.5
HOMER3-201ENST00000221222 FANCIQ9NVI1 1328 aa30.66■■■□□ 2.5
HOMER3-201ENST00000221222 SGIP1Q9BQI5 828 aa30.66■■■□□ 2.5
HOMER3-201ENST00000221222 FHDC1Q9C0D6 1143 aaPredicted RBP30.66■■■□□ 2.5
HOMER3-201ENST00000221222 MYH16Q9H6N6 1097 aa30.66■■■□□ 2.5
HOMER3-201ENST00000221222 USP16Q9Y5T5 823 aa30.66■■■□□ 2.5
HOMER3-201ENST00000221222 YY1P25490 414 aa30.65■■■□□ 2.5
HOMER3-201ENST00000221222 CRKLP46109 303 aaKnown RBP30.65■■■□□ 2.5
HOMER3-201ENST00000221222 KRT24Q2M2I5 525 aa30.64■■■□□ 2.5
HOMER3-201ENST00000221222 AK7Q96M32 723 aa30.64■■■□□ 2.5
HOMER3-201ENST00000221222 ZBED9Q6R2W3 1325 aa30.63■■■□□ 2.49
HOMER3-201ENST00000221222 E9PSI1 815 aa30.63■■■□□ 2.49
HOMER3-201ENST00000221222 HOXB7P09629 217 aa30.63■■■□□ 2.49
HOMER3-201ENST00000221222 INTS5Q6P9B9 1019 aaKnown RBP30.63■■■□□ 2.49
HOMER3-201ENST00000221222 TFCP2L1Q9NZI6 479 aa30.63■■■□□ 2.49
HOMER3-201ENST00000221222 SLFN5Q08AF3 891 aa30.62■■■□□ 2.49
HOMER3-201ENST00000221222 CCDC87Q9NVE4 849 aa30.62■■■□□ 2.49
HOMER3-201ENST00000221222 PNPLA7Q6ZV29 1317 aa30.61■■■□□ 2.49
HOMER3-201ENST00000221222 ARXQ96QS3 562 aa30.61■■■□□ 2.49
HOMER3-201ENST00000221222 SYT17Q9BSW7 474 aa30.6■■■□□ 2.49
HOMER3-201ENST00000221222 GNPATO15228 680 aa30.59■■■□□ 2.49
HOMER3-201ENST00000221222 DUSP27Q5VZP5 1158 aa30.59■■■□□ 2.49
HOMER3-201ENST00000221222 SOS1Q07889 1333 aaPredicted RBP30.59■■■□□ 2.49
HOMER3-201ENST00000221222 RPS6KA4O75676 772 aa30.58■■■□□ 2.49
HOMER3-201ENST00000221222 TRMT2AQ8IZ69 625 aaKnown RBP30.58■■■□□ 2.49
HOMER3-201ENST00000221222 C8orf58Q8NAV2 365 aa30.58■■■□□ 2.49
HOMER3-201ENST00000221222 CDCA7LQ96GN5 454 aa30.58■■■□□ 2.49
HOMER3-201ENST00000221222 ZBTB1Q9Y2K1 713 aa30.57■■■□□ 2.48
HOMER3-201ENST00000221222 A1BGP04217 495 aa30.56■■■□□ 2.48
HOMER3-201ENST00000221222 RTCBQ9Y3I0 505 aaKnown RBP30.56■■■□□ 2.48
HOMER3-201ENST00000221222 SSFA2P28290 1259 aa30.55■■■□□ 2.48
HOMER3-201ENST00000221222 AMIGO3Q86WK7 504 aa30.55■■■□□ 2.48
HOMER3-201ENST00000221222 KLHL34Q8N239 644 aa30.55■■■□□ 2.48
HOMER3-201ENST00000221222 TSPYL6Q8N831 410 aa30.54■■■□□ 2.48
HOMER3-201ENST00000221222 FLAD1Q8NFF5 587 aa30.54■■■□□ 2.48
HOMER3-201ENST00000221222 ERBB4Q15303 1308 aa30.54■■■□□ 2.48
HOMER3-201ENST00000221222 EXOSC9Q06265 439 aaKnown RBP30.54■■■□□ 2.48
HOMER3-201ENST00000221222 C4AP0C0L4 1744 aa30.53■■■□□ 2.48
HOMER3-201ENST00000221222 ELL2O00472 640 aaPredicted RBP30.53■■■□□ 2.48
HOMER3-201ENST00000221222 MSH5O43196 834 aa30.53■■■□□ 2.48
HOMER3-201ENST00000221222 ADRA2BP18089 450 aa30.53■■■□□ 2.48
HOMER3-201ENST00000221222 SLC16A10Q8TF71 515 aa30.53■■■□□ 2.48
HOMER3-201ENST00000221222 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.52■■■□□ 2.48
HOMER3-201ENST00000221222 EIF2S2P20042 333 aaKnown RBP30.52■■■□□ 2.48
HOMER3-201ENST00000221222 CANXP27824 592 aaKnown RBP30.52■■■□□ 2.48
HOMER3-201ENST00000221222 IL6STP40189 918 aaPredicted RBP30.52■■■□□ 2.48
HOMER3-201ENST00000221222 TWISTNBQ3B726 338 aaPredicted RBP30.52■■■□□ 2.48
HOMER3-201ENST00000221222 NBPF26B4DH59 902 aa30.51■■■□□ 2.47
HOMER3-201ENST00000221222 EIF5P55010 431 aaKnown RBP30.51■■■□□ 2.47
HOMER3-201ENST00000221222 NBPF10Q6P3W6 841 aaKnown RBP30.51■■■□□ 2.47
HOMER3-201ENST00000221222 NBPF15Q8N660 670 aa30.51■■■□□ 2.47
HOMER3-201ENST00000221222 POLD1P28340 1107 aa30.5■■■□□ 2.47
HOMER3-201ENST00000221222 HDGFL1Q5TGJ6 251 aa30.5■■■□□ 2.47
HOMER3-201ENST00000221222 CHMP4AQ9BY43 222 aa30.5■■■□□ 2.47
HOMER3-201ENST00000221222 PHF14O94880 888 aa30.49■■■□□ 2.47
HOMER3-201ENST00000221222 TRAPPC3LQ5T215 181 aa30.49■■■□□ 2.47
HOMER3-201ENST00000221222 SMIM5Q71RC9 77 aa30.49■■■□□ 2.47
HOMER3-201ENST00000221222 COL23A1Q86Y22 540 aaPredicted RBP30.49■■■□□ 2.47
HOMER3-201ENST00000221222 COL15A1P39059 1388 aa30.48■■■□□ 2.47
HOMER3-201ENST00000221222 PIP4K2AP48426 406 aaPredicted RBP30.47■■■□□ 2.47
HOMER3-201ENST00000221222 PDIA6Q15084 440 aa30.47■■■□□ 2.47
HOMER3-201ENST00000221222 ARHGEF1Q92888 912 aaKnown RBP30.47■■■□□ 2.47
HOMER3-201ENST00000221222 VAMP4O75379 141 aa30.46■■■□□ 2.47
HOMER3-201ENST00000221222 NECTIN2Q92692 538 aa30.46■■■□□ 2.47
HOMER3-201ENST00000221222 COL24A1Q17RW2 1714 aa30.46■■■□□ 2.47
HOMER3-201ENST00000221222 DDX21Q9NR30 783 aaKnown RBP eCLIP30.45■■■□□ 2.47
HOMER3-201ENST00000221222 MSL1Q68DK7 614 aa30.44■■■□□ 2.46
HOMER3-201ENST00000221222 DBF4Q9UBU7 674 aaPredicted RBP30.44■■■□□ 2.46
HOMER3-201ENST00000221222 A0A087WZG4 1122 aa30.43■■■□□ 2.46
HOMER3-201ENST00000221222 CCDC30Q5VVM6 783 aa30.43■■■□□ 2.46
HOMER3-201ENST00000221222 LRP10Q7Z4F1 713 aa30.43■■■□□ 2.46
HOMER3-201ENST00000221222 CHPF2Q9P2E5 772 aa30.43■■■□□ 2.46
HOMER3-201ENST00000221222 CACNA1FO60840 1977 aa30.42■■■□□ 2.46
HOMER3-201ENST00000221222 MYL6BP14649 208 aa30.41■■■□□ 2.46
HOMER3-201ENST00000221222 RFC4P35249 363 aa30.41■■■□□ 2.46
HOMER3-201ENST00000221222 PROSER3Q2NL68 480 aa30.41■■■□□ 2.46
HOMER3-201ENST00000221222 NPM2Q86SE8 214 aaKnown RBP30.41■■■□□ 2.46
HOMER3-201ENST00000221222 SCN7AQ01118 1682 aa30.41■■■□□ 2.46
HOMER3-201ENST00000221222 ZNF330Q9Y3S2 320 aaPredicted RBP30.41■■■□□ 2.46
HOMER3-201ENST00000221222 BCORQ6W2J9 1755 aa30.4■■■□□ 2.46
HOMER3-201ENST00000221222 NARFQ9UHQ1 456 aa30.4■■■□□ 2.46
HOMER3-201ENST00000221222 USP42Q9H9J4 1324 aaKnown RBP30.39■■■□□ 2.46
HOMER3-201ENST00000221222 ANXA1P04083 346 aa30.39■■■□□ 2.45
HOMER3-201ENST00000221222 CT47B1P0C2W7 299 aaPredicted RBP30.39■■■□□ 2.45
HOMER3-201ENST00000221222 YTHDC1Q96MU7 727 aaKnown RBP30.39■■■□□ 2.45
HOMER3-201ENST00000221222 PELP1Q8IZL8 1130 aaKnown RBP30.38■■■□□ 2.45
HOMER3-201ENST00000221222 HYPKQ9NX55 129 aa30.38■■■□□ 2.45
HOMER3-201ENST00000221222 GPR162Q16538 588 aa30.37■■■□□ 2.45
HOMER3-201ENST00000221222 NLGN2Q8NFZ4 835 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms