RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 HellsQ60848 821 aa17.79■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Irf9Q61179 399 aa17.79■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Ankrd23Q812A3 306 aa17.79■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Flad1Q8R123 492 aa17.79■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Triml2E9PW10 424 aa17.78■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Sptbn5F6UCX4 1208 aa17.78■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Gnai2P08752 355 aaKnown RBP17.78■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Fgd1P52734 960 aa17.78■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Fam13aQ8BGI4 693 aa17.78■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Ddx60E9PZQ1 1711 aa17.78■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Bcl2l13P59017 434 aa17.77■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Emilin2Q8K482 1074 aa17.77■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Nav1Q8CH77 1875 aa17.77■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Exoc5Q3TPX4 708 aa17.76■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Prkab2Q6PAM0 271 aa17.76■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Cetn4Q8K4K1 168 aa17.76■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Mylk2Q8VCR8 613 aa17.76■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Brd1E9PZ26 1189 aaKnown RBP17.76■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Ccnl1Q52KE7 532 aaKnown RBP17.76■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Trim52Q8CDV4 233 aa17.76■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Kndc1Q0KK55 1742 aa17.75■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Map3k2Q61083 619 aa17.75■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Aldh8a1Q8BH00 487 aa17.75■□□□□ 0.43
Ssr1-204ENSMUST00000225319 ApobrQ8VBT6 942 aa17.75■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Cntnap1O54991 1385 aa17.75■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Eif3aP23116 1344 aaKnown RBP17.74■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Ppm1mQ8BU27 406 aa17.74■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Pdlim2Q8R1G6 349 aa17.74■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Psrc1Q9D0P7 329 aa17.74■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Igfbp6P47880 238 aa17.73■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Cgnl1Q6AW69 1298 aa17.73■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Ggt6Q6PDE7 497 aa17.73■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Htatsf1Q8BGC0 757 aa17.73■□□□□ 0.43
Ssr1-204ENSMUST00000225319 CarsQ9ER72 831 aaKnown RBP17.73■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Sipa1l3G3X9J0 1776 aa17.73■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Hdac6Q9Z2V5 1149 aa17.72■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Exoc6bA6H5Z3 810 aa17.72■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Zap70P43404 618 aa17.72■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Atp8b2P98199 1209 aa17.72■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Eif4g2Q62448 906 aaKnown RBP17.72■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Ankle2Q6P1H6 964 aa17.72■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Col4a1P02463 1669 aa17.71■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Pnmal2G3X9N3 661 aa17.71■□□□□ 0.43
Ssr1-204ENSMUST00000225319 InhbeO08717 350 aa17.71■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Bicc1Q99MQ1 977 aaKnown RBP17.71■□□□□ 0.43
Ssr1-204ENSMUST00000225319 Ddb1Q3U1J4 1140 aaKnown RBP17.7■□□□□ 0.42
Ssr1-204ENSMUST00000225319 4933416C03RikQ3V063 378 aa17.7■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Mum1Q6DID5 682 aa17.7■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Mphosph10Q810V0 681 aaKnown RBP17.7■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Gcc1Q9D4H2 778 aa17.7■□□□□ 0.42
Ssr1-204ENSMUST00000225319 KnstrnQ9D9Z1 312 aaKnown RBP17.7■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Abca3Q8R420 1704 aa17.7■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Ltbp1Q8CG19 1712 aa17.69■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Sema6bO54951 886 aa17.69■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Kif18aQ91WD7 886 aa17.69■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Casz1Q9CWL2 1761 aa17.69■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Ttll7A4Q9F0 912 aa17.69■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Tnpo1Q8BFY9 898 aaKnown RBP17.69■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Slc39a6Q8C145 765 aa17.69■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Ppp1r42Q8R1Z4 357 aa17.69■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Cap2Q9CYT6 476 aa17.69■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Mmp8O70138 465 aa17.68■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Cfdp1O88271 295 aaKnown RBP17.68■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Mcm2P97310 904 aa17.68■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Sf3b2Q3UJB0 878 aaKnown RBP17.68■□□□□ 0.42
Ssr1-204ENSMUST00000225319 MypnQ5DTJ9 1315 aa17.67■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Ank1Q02357 1862 aa17.67■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Ric1Q69ZJ7 1422 aa17.67■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Hoxa7P02830 229 aa17.67■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Smg7Q5RJH6 1138 aaKnown RBP17.67■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Srgap3Q812A2 1099 aa17.67■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Mfap1aC0HKD8 439 aaKnown RBP17.66■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Mfap1bC0HKD9 439 aaKnown RBP17.66■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Ier5O89113 308 aa17.66■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Gm12185Q5NCB2 835 aa17.66■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Zbtb40Q6PCS8 1258 aa17.66■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Jmjd4Q8BFT6 427 aa17.66■□□□□ 0.42
Ssr1-204ENSMUST00000225319 MypopQ8R4U1 393 aa17.66■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Nphp1Q9QY53 687 aa17.66■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Mrc1Q61830 1456 aa17.66■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Grm8P47743 908 aa17.65■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Pde4dQ01063 747 aa17.65■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Dcaf5Q80T85 946 aa17.65■□□□□ 0.42
Ssr1-204ENSMUST00000225319 MetP16056 1379 aa17.65■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Nyap1Q6PFX7 833 aa17.65■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Ddx58Q6Q899 926 aa17.65■□□□□ 0.42
Ssr1-204ENSMUST00000225319 FanclQ9CR14 375 aa17.65■□□□□ 0.42
Ssr1-204ENSMUST00000225319 Syde2E9PUP1 1314 aa17.64■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Atg4a-psA0A0G2JFS9 396 aa17.63■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Wdr63B2RY71 923 aa17.63■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Tlr7P58681 1050 aa17.63■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Cwc27Q3TKY6 469 aa17.63■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Atg4aQ8C9S8 396 aa17.63■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Tceal9Q9DD24 104 aa17.63■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Mcmdc2E9Q956 681 aa17.62■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Cog6Q8R3I3 657 aa17.62■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Gigyf1Q99MR1 1044 aaKnown RBP17.62■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Ripor2Q80U16 1078 aa17.61■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Eno4Q8C042 619 aa17.61■□□□□ 0.41
Ssr1-204ENSMUST00000225319 Lmbr1lQ9D1E5 489 aa17.61■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms