RNA–Protein interactions for RNA: ENSMUST00000202681.3

Pdgfra-208, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 2,876 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-208ENSMUST00000202681 Cchcr1Q8K2I2 770 aa10.39□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Nol7Q9D7Z3 254 aaKnown RBP10.39□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Eif2ak4Q9QZ05 1648 aa10.39□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Phactr2B1AVP0 632 aa10.39□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Mcm3P25206 812 aaKnown RBP10.39□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Ube2hP62257 183 aa10.39□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Nol12Q8BG17 217 aa10.39□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Vps33aQ9D2N9 598 aa10.39□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Wdr93Q402B2 695 aa10.38□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Fbxo3Q9DC63 480 aa10.38□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Adamts7Q68SA9 1657 aa10.38□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 InsrP15208 1372 aa10.38□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Znf541Q0GGX2 1363 aa10.38□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Prr29B1ARI9 187 aa10.38□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Zkscan7E9PVW1 718 aa10.38□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Vamp4O70480 141 aa10.38□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Dixdc1Q80Y83 711 aa10.38□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Slc24a3Q99PD7 645 aa10.38□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Sytl4Q9R0Q1 673 aa10.38□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Usp25P57080 1055 aa10.37□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Ccdc34Q3UI66 367 aa10.37□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Frmd3Q8BHD4 595 aa10.37□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Tecpr2Q3UH45 1423 aa10.37□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Atp7bQ64446 1462 aa10.37□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 EvcP57680 1005 aa10.37□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Morc2aQ69ZX6 1030 aa10.37□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Snx13Q6PHS6 957 aa10.37□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Smarca5Q91ZW3 1051 aaKnown RBP10.37□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Serpinb6bO08804 377 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Smarce1O54941 411 aaKnown RBP10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Slc7a3P70423 618 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Arglu1Q3UL36 271 aaKnown RBP10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Slc20a2Q80UP8 656 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Ccz1Q8C1Y8 480 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Ccdc178Q8CDV0 866 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Otud6bQ8K2H2 294 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 BbxQ8VBW5 907 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Ferd3lQ923Z4 168 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Ap3b2Q9JME5 1082 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Kansl3A2RSY1 903 aaKnown RBP10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Lrriq3Q14DL3 633 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Mctp2Q5RJH2 878 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Ddx19aQ61655 478 aaKnown RBP10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Sf3a1Q8K4Z5 791 aaKnown RBP10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Creld2Q9CYA0 350 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Cdc37l1Q9CZP7 335 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 HnrnpmQ9D0E1 729 aaKnown RBP10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Add3Q9QYB5 706 aaKnown RBP10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Zeb2Q9R0G7 1215 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Sipa1l1Q8C0T5 1782 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 1700017N19RikA0A087WPJ1 469 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Triml2E9PW10 424 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 MccE9PWI3 1003 aa10.36□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Lcmt1A0A0U1RNF2 332 aa10.35□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Fam13aQ8BGI4 693 aa10.35□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Cyp46a1Q9WVK8 500 aa10.35□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Uggt1Q6P5E4 1551 aa10.35□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Spata32Q8C5V0 334 aa10.35□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 KinQ8K339 391 aa10.35□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Plxnc1Q9QZC2 1574 aa10.34□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Anapc15P60007 132 aa10.34□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 TfrcQ62351 763 aaKnown RBP10.34□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Cep135Q6P5D4 1140 aa10.34□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Fam53cQ8BXQ8 393 aa10.34□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Syt10Q9R0N4 523 aa10.34□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Kif24Q6NWW5 1356 aa10.34□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Tm6sf1P58749 370 aa10.34□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Ap5z1Q3U829 807 aa10.34□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Kmt5bQ3U8K7 883 aa10.34□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Nrbp1Q99J45 535 aa10.34□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 PdcQ9QW08 244 aa10.34□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Gm11983V9GXS8 105 aa10.34□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 MaddQ80U28 1577 aa10.34□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Spata31d1bE9QA57 1361 aa10.33□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Elmsan1E9Q2I4 1089 aaKnown RBP10.33□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Strn4P58404 760 aa10.33□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Ift57Q8BXG3 429 aa10.33□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Rab11fip3Q8CHD8 1047 aa10.33□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Exosc9Q9JHI7 438 aaKnown RBP10.33□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Usp32F8VPZ3 1604 aa10.33□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Atg4a-psA0A0G2JFS9 396 aa10.33□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Samd1D3YXK1 519 aa10.33□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Pip4k2bQ80XI4 416 aa10.33□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Atg4aQ8C9S8 396 aa10.33□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Wdr24Q8CFJ9 790 aa10.33□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Aldh1l2Q8K009 923 aa10.33□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Ccdc7Q9D541 371 aa10.33□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Tpm1P58771 284 aa10.32□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Rtel1Q0VGM9 1203 aa10.32□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Ano6Q6P9J9 911 aa10.32□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Ttc27Q8CD92 847 aa10.32□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 PalldQ9ET54 1408 aa10.32□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Mtx1P47802 317 aa10.32□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 CalcaP70160 136 aa10.32□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Ric3Q8BPM6 367 aa10.32□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Hmgn5Q9JL35 406 aa10.32□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Nrxn1Q9CS84 1514 aa10.32□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Utp18Q5SSI6 552 aaKnown RBP10.32□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Prune1Q8BIW1 454 aa10.32□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 DpydQ8CHR6 1025 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms