RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Gm5862K7N5V5 267 aa11.79□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Gm10220K7N660 267 aa11.79□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 EgfrQ01279 1210 aa11.79□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Stk32bQ9JJX8 414 aa11.79□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 PalmQ9Z0P4 383 aa11.79□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Col11a2Q64739 1736 aa11.79□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Msh6P54276 1358 aaKnown RBP11.79□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Scn7aB1AYL1 1681 aa11.78□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 VegfbP49766 207 aa11.78□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Miga2Q8BK03 593 aa11.78□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Ppp1r3fQ9JIG4 799 aa11.78□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Scnn1bQ9WU38 638 aa11.78□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Golgb1E9PVZ8 3238 aa11.78□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Usp34Q6ZQ93 3582 aa11.77□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Ubr3Q5U430 1889 aa11.77□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 NpcdF8VQB8 469 aa11.77□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Birc3O08863 600 aa11.77□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Adcy9P51830 1353 aa11.77□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Actn4P57780 912 aaKnown RBP11.76□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Simc1E9Q6E9 1354 aa11.76□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 C4bP01029 1738 aa11.75□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 E9Q0B3 247 aa11.75□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Wdhd1P59328 1117 aa11.75□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 PrimpolQ6P1E7 537 aa11.75□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 PdgfdQ925I7 370 aa11.75□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Plagl1Q9JLQ4 704 aa11.75□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Togaram1Q6A070 1776 aaKnown RBP11.74□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 CfhP06909 1234 aa11.74□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Jmjd4Q8BFT6 427 aa11.74□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Slc5a1Q8C3K6 665 aa11.74□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Spire2Q8K1S6 718 aa11.74□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Amhr2Q8K592 568 aa11.74□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 D830030K20RikE9PYQ5 218 aa11.73□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Gm3043K7N693 218 aa11.73□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Gm16440K7N6G6 218 aa11.73□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Gm2244L7N2A3 218 aa11.73□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Gm3278L7N2D2 218 aa11.73□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Gm8271L7N2E2 218 aa11.73□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Lmnb1P14733 588 aaKnown RBP11.73□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Trpm3Q5F4S9 1721 aa11.73□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Ric1Q69ZJ7 1422 aa11.73□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Znf428Q8C1M2 176 aa11.73□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Eif3bQ8JZQ9 803 aaKnown RBP11.73□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Crb1Q8VHS2 1405 aa11.73□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Atg3Q9CPX6 314 aa11.73□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Gga1Q8R0H9 635 aa11.72□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Rock2P70336 1388 aa11.71□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Slurp2P0DP59 97 aa11.71□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Q8C6G1 249 aa11.71□□□□□ -0.53
Pdlim5-209ENSMUST00000196908 Setdb1O88974 1307 aa11.7□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Smpd1Q04519 627 aa11.7□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Dcaf5Q80T85 946 aa11.7□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Rasgrp4Q8BTM9 673 aa11.7□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Spock2Q9ER58 423 aa11.7□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Kdm6aO70546 1401 aa11.69□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Slc4a9E9PUP3 929 aa11.69□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Rnf166Q3U9F6 237 aa11.69□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Rbm26Q6NZN0 1012 aaKnown RBP11.69□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Tango6Q8C3S2 1079 aa11.69□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Ildr1Q8CBR1 537 aa11.69□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 RragcQ99K70 398 aa11.69□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Frmpd3A0A140LIW3 1774 aa11.69□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Sos1Q62245 1319 aa11.68□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 StrcQ8VIM6 1809 aa11.68□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Magea8O89012 320 aa11.68□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Srp68Q8BMA6 625 aaKnown RBP11.68□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Ints5Q8CHT3 1018 aa11.68□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Cd248Q91V98 765 aa11.68□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Col24a1Q30D77 1733 aa11.68□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Tspoap1Q7TNF8 1846 aa11.67□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Unc5clQ6R653 518 aa11.67□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Ptcd1Q8C2E4 695 aaKnown RBP11.67□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 HmcesQ8R1M0 353 aaKnown RBP11.67□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Cap2Q9CYT6 476 aa11.67□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Asic4Q7TNS7 539 aa11.66□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Col4a5Q63ZW6 1691 aa11.65□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Usp48Q3V0C5 1052 aa11.65□□□□□ -0.54
Pdlim5-209ENSMUST00000196908 Tjp1P39447 1745 aaKnown RBP11.64□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Rundc1Q0VDN7 615 aa11.64□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Nlgn2Q69ZK9 836 aa11.64□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Rad17Q6NXW6 688 aa11.64□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Zfyve9A2A8R0 1397 aa11.64□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Fkbp4P30416 458 aa11.63□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Hspa8P63017 646 aaKnown RBP11.63□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Eya1P97767 591 aa11.63□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Smg7Q5RJH6 1138 aaKnown RBP11.63□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Slfnl1Q8BHW9 410 aa11.63□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Sin3aQ60520 1274 aaKnown RBP11.62□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Tktl2Q9D4D4 627 aa11.62□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Phkg2Q9DB30 406 aa11.62□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Atp1b3P97370 278 aa11.61□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Pdzph1Q8BGR1 1238 aa11.61□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Thsd7bQ6P4U0 1607 aa11.6□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Gja5Q01231 358 aa11.6□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Chmp7Q8R1T1 451 aa11.6□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Ferd3lQ923Z4 168 aa11.6□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Hoxb7P09024 217 aa11.59□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Stra8P70278 393 aa11.59□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Tbc1d32Q3URV1 1296 aa11.59□□□□□ -0.55
Pdlim5-209ENSMUST00000196908 Parp14Q2EMV9 1817 aa11.58□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms