RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Tiam2Q6ZPF3 1715 aa13.4□□□□□ -0.26
Lig3-212ENSMUST00000173727 Brd1E9PZ26 1189 aaKnown RBP13.39□□□□□ -0.27
Lig3-212ENSMUST00000173727 PappaQ8R4K8 1624 aa13.39□□□□□ -0.27
Lig3-212ENSMUST00000173727 Pnmal2G3X9N3 661 aa13.39□□□□□ -0.27
Lig3-212ENSMUST00000173727 Cgnl1Q6AW69 1298 aa13.39□□□□□ -0.27
Lig3-212ENSMUST00000173727 Eif2s2Q99L45 331 aaKnown RBP13.39□□□□□ -0.27
Lig3-212ENSMUST00000173727 Crb1Q8VHS2 1405 aa13.39□□□□□ -0.27
Lig3-212ENSMUST00000173727 Sf3b2Q3UJB0 878 aaKnown RBP13.39□□□□□ -0.27
Lig3-212ENSMUST00000173727 Ankrd23Q812A3 306 aa13.39□□□□□ -0.27
Lig3-212ENSMUST00000173727 Slc39a6Q8C145 765 aa13.39□□□□□ -0.27
Lig3-212ENSMUST00000173727 Kif18aQ91WD7 886 aa13.39□□□□□ -0.27
Lig3-212ENSMUST00000173727 Phlpp2Q8BXA7 1320 aa13.39□□□□□ -0.27
Lig3-212ENSMUST00000173727 Mst1rQ62190 1378 aa13.39□□□□□ -0.27
Lig3-212ENSMUST00000173727 Spryd3E9Q9B3 442 aa13.38□□□□□ -0.27
Lig3-212ENSMUST00000173727 Srgap3Q812A2 1099 aa13.38□□□□□ -0.27
Lig3-212ENSMUST00000173727 ScaperF8VQ70 1398 aaKnown RBP13.38□□□□□ -0.27
Lig3-212ENSMUST00000173727 Smg7Q5RJH6 1138 aaKnown RBP13.38□□□□□ -0.27
Lig3-212ENSMUST00000173727 Ppp1r42Q8R1Z4 357 aa13.38□□□□□ -0.27
Lig3-212ENSMUST00000173727 Bicc1Q99MQ1 977 aaKnown RBP13.38□□□□□ -0.27
Lig3-212ENSMUST00000173727 Ccdc183A2AJB1 534 aa13.37□□□□□ -0.27
Lig3-212ENSMUST00000173727 KnstrnQ9D9Z1 312 aaKnown RBP13.37□□□□□ -0.27
Lig3-212ENSMUST00000173727 Tjp1P39447 1745 aaKnown RBP13.37□□□□□ -0.27
Lig3-212ENSMUST00000173727 Atp8b2P98199 1209 aa13.37□□□□□ -0.27
Lig3-212ENSMUST00000173727 Map3k13Q1HKZ5 959 aa13.37□□□□□ -0.27
Lig3-212ENSMUST00000173727 HellsQ60848 821 aa13.37□□□□□ -0.27
Lig3-212ENSMUST00000173727 Igfbp6P47880 238 aa13.37□□□□□ -0.27
Lig3-212ENSMUST00000173727 Cwc27Q3TKY6 469 aa13.37□□□□□ -0.27
Lig3-212ENSMUST00000173727 Aldh8a1Q8BH00 487 aa13.37□□□□□ -0.27
Lig3-212ENSMUST00000173727 Eif3aP23116 1344 aaKnown RBP13.37□□□□□ -0.27
Lig3-212ENSMUST00000173727 Fer1l6E0CZ42 1862 aa13.37□□□□□ -0.27
Lig3-212ENSMUST00000173727 Ttll7A4Q9F0 912 aa13.36□□□□□ -0.27
Lig3-212ENSMUST00000173727 Emilin2Q8K482 1074 aa13.36□□□□□ -0.27
Lig3-212ENSMUST00000173727 FanclQ9CR14 375 aa13.36□□□□□ -0.27
Lig3-212ENSMUST00000173727 Nphp1Q9QY53 687 aa13.36□□□□□ -0.27
Lig3-212ENSMUST00000173727 Ddb1Q3U1J4 1140 aaKnown RBP13.36□□□□□ -0.27
Lig3-212ENSMUST00000173727 Ankle2Q6P1H6 964 aa13.36□□□□□ -0.27
Lig3-212ENSMUST00000173727 Ak7Q9D2H2 614 aa13.36□□□□□ -0.27
Lig3-212ENSMUST00000173727 Gcc1Q9D4H2 778 aa13.36□□□□□ -0.27
Lig3-212ENSMUST00000173727 Ipo8Q7TMY7 1010 aa13.35□□□□□ -0.27
Lig3-212ENSMUST00000173727 Eno4Q8C042 619 aa13.35□□□□□ -0.27
Lig3-212ENSMUST00000173727 Cap2Q9CYT6 476 aa13.35□□□□□ -0.27
Lig3-212ENSMUST00000173727 Shank2Q80Z38 1476 aa13.35□□□□□ -0.27
Lig3-212ENSMUST00000173727 Ccdc146E9Q9F7 977 aa13.35□□□□□ -0.27
Lig3-212ENSMUST00000173727 Hdac6Q9Z2V5 1149 aa13.35□□□□□ -0.27
Lig3-212ENSMUST00000173727 Erbb4Q61527 1308 aa13.35□□□□□ -0.27
Lig3-212ENSMUST00000173727 Nwd2Q6P5U7 1742 aa13.34□□□□□ -0.27
Lig3-212ENSMUST00000173727 Mast2Q60592 1734 aa13.34□□□□□ -0.27
Lig3-212ENSMUST00000173727 Znf692Q3U381 531 aa13.34□□□□□ -0.27
Lig3-212ENSMUST00000173727 Cog6Q8R3I3 657 aa13.34□□□□□ -0.27
Lig3-212ENSMUST00000173727 Smarca5Q91ZW3 1051 aaKnown RBP13.34□□□□□ -0.27
Lig3-212ENSMUST00000173727 Cacna1sQ02789 1880 aa13.34□□□□□ -0.27
Lig3-212ENSMUST00000173727 Hsp90ab1P11499 724 aaKnown RBP13.34□□□□□ -0.27
Lig3-212ENSMUST00000173727 Vps33bP59016 617 aa13.34□□□□□ -0.27
Lig3-212ENSMUST00000173727 Mre11Q61216 706 aa13.34□□□□□ -0.27
Lig3-212ENSMUST00000173727 Trim52Q8CDV4 233 aa13.34□□□□□ -0.27
Lig3-212ENSMUST00000173727 Tceal9Q9DD24 104 aa13.34□□□□□ -0.27
Lig3-212ENSMUST00000173727 Cers3Q1A3B0 383 aa13.33□□□□□ -0.27
Lig3-212ENSMUST00000173727 Shank3Q4ACU6 1730 aa13.33□□□□□ -0.28
Lig3-212ENSMUST00000173727 Mmp8O70138 465 aa13.33□□□□□ -0.28
Lig3-212ENSMUST00000173727 Mcm2P97310 904 aa13.33□□□□□ -0.28
Lig3-212ENSMUST00000173727 Ppm1mQ8BU27 406 aa13.33□□□□□ -0.28
Lig3-212ENSMUST00000173727 Ier5O89113 308 aa13.33□□□□□ -0.28
Lig3-212ENSMUST00000173727 Ppm1gQ61074 542 aa13.33□□□□□ -0.28
Lig3-212ENSMUST00000173727 Mum1Q6DID5 682 aa13.33□□□□□ -0.28
Lig3-212ENSMUST00000173727 Mylk2Q8VCR8 613 aa13.33□□□□□ -0.28
Lig3-212ENSMUST00000173727 Wdr63B2RY71 923 aa13.32□□□□□ -0.28
Lig3-212ENSMUST00000173727 Tlr7P58681 1050 aa13.32□□□□□ -0.28
Lig3-212ENSMUST00000173727 Lmbr1lQ9D1E5 489 aa13.32□□□□□ -0.28
Lig3-212ENSMUST00000173727 Hspa2P17156 633 aa13.32□□□□□ -0.28
Lig3-212ENSMUST00000173727 Grm8P47743 908 aa13.32□□□□□ -0.28
Lig3-212ENSMUST00000173727 Ddx60E9PZQ1 1711 aa13.32□□□□□ -0.28
Lig3-212ENSMUST00000173727 Slc4a10Q5DTL9 1118 aa13.32□□□□□ -0.28
Lig3-212ENSMUST00000173727 Jmjd4Q8BFT6 427 aa13.32□□□□□ -0.28
Lig3-212ENSMUST00000173727 Gm12185Q5NCB2 835 aa13.31□□□□□ -0.28
Lig3-212ENSMUST00000173727 Lrp6O88572 1613 aa13.31□□□□□ -0.28
Lig3-212ENSMUST00000173727 Atg4a-psA0A0G2JFS9 396 aa13.31□□□□□ -0.28
Lig3-212ENSMUST00000173727 Atg4aQ8C9S8 396 aa13.31□□□□□ -0.28
Lig3-212ENSMUST00000173727 InhbeO08717 350 aa13.31□□□□□ -0.28
Lig3-212ENSMUST00000173727 Ddx58Q6Q899 926 aa13.31□□□□□ -0.28
Lig3-212ENSMUST00000173727 Dcaf5Q80T85 946 aa13.31□□□□□ -0.28
Lig3-212ENSMUST00000173727 Sema6bO54951 886 aa13.3□□□□□ -0.28
Lig3-212ENSMUST00000173727 Nav1Q8CH77 1875 aa13.3□□□□□ -0.28
Lig3-212ENSMUST00000173727 Cyp46a1Q9WVK8 500 aa13.3□□□□□ -0.28
Lig3-212ENSMUST00000173727 MypnQ5DTJ9 1315 aa13.3□□□□□ -0.28
Lig3-212ENSMUST00000173727 Mcmdc2E9Q956 681 aa13.3□□□□□ -0.28
Lig3-212ENSMUST00000173727 Clcn1Q64347 994 aa13.3□□□□□ -0.28
Lig3-212ENSMUST00000173727 Zbtb40Q6PCS8 1258 aa13.3□□□□□ -0.28
Lig3-212ENSMUST00000173727 Nyap1Q6PFX7 833 aa13.3□□□□□ -0.28
Lig3-212ENSMUST00000173727 Syde2E9PUP1 1314 aa13.29□□□□□ -0.28
Lig3-212ENSMUST00000173727 Tnrc6cQ3UHC0 1690 aaKnown RBP13.29□□□□□ -0.28
Lig3-212ENSMUST00000173727 Pde4dQ01063 747 aa13.29□□□□□ -0.28
Lig3-212ENSMUST00000173727 Fkbp5Q64378 456 aa13.29□□□□□ -0.28
Lig3-212ENSMUST00000173727 MypopQ8R4U1 393 aa13.29□□□□□ -0.28
Lig3-212ENSMUST00000173727 Col4a1P02463 1669 aa13.28□□□□□ -0.28
Lig3-212ENSMUST00000173727 Kcnn1Q9EQR3 537 aa13.28□□□□□ -0.28
Lig3-212ENSMUST00000173727 Tgfb1i1Q62219 461 aa13.28□□□□□ -0.28
Lig3-212ENSMUST00000173727 Cntnap1O54991 1385 aa13.27□□□□□ -0.28
Lig3-212ENSMUST00000173727 Soga3Q6NZL0 945 aa13.27□□□□□ -0.29
Lig3-212ENSMUST00000173727 Mfap1aC0HKD8 439 aaKnown RBP13.27□□□□□ -0.29
Lig3-212ENSMUST00000173727 Mfap1bC0HKD9 439 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms