RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 Cnksr1A2A9K7 700 aa15.81■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Rbm25B2RY56 838 aaKnown RBP15.81■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 ScaperF8VQ70 1398 aaKnown RBP15.81■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Ubxn2bQ0KL01 331 aa15.81■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Togaram1Q6A070 1776 aaKnown RBP15.81■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Slfnl1Q8BHW9 410 aa15.81■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Nsfl1cQ9CZ44 370 aaKnown RBP15.81■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Trip6Q9Z1Y4 480 aa15.81■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Neurod2Q62414 383 aa15.8■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Esco1Q69Z69 843 aa15.8■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Gnl3lQ6PGG6 577 aaKnown RBP15.8■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 CpzQ8R4V4 654 aa15.8■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Kank1E9Q238 1360 aa15.79■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 1700019A02RikA0A087WPV9 146 aa15.79■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Tnnt1O88346 262 aa15.79■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 1810065E05RikQ5NC41 235 aa15.79■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 SowahdQ8BY98 327 aa15.79■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Egfem1Q8C088 590 aa15.79■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Slc39a6Q8C145 765 aa15.79■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 StrcQ8VIM6 1809 aa15.78■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Cfap70D3YVL2 1141 aa15.78■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Tlr8P58682 1032 aa15.78■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Bcl2l13P59017 434 aa15.78■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Wdhd1P59328 1117 aa15.78■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Snai1Q02085 264 aa15.78■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Srp68Q8BMA6 625 aaKnown RBP15.78■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Ccdc30Q8BVF4 654 aa15.78■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Ambra1A2AH22 1300 aa15.77■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Magea6O89010 325 aa15.77■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Magea3Q6T340 320 aa15.77■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Mrps5Q99N87 432 aaKnown RBP15.77■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Kcna3P16390 528 aa15.76■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Tgfb2P27090 414 aa15.76■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Ankle2Q6P1H6 964 aa15.76■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Slf2Q6P9P0 1278 aa15.76■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Hirip3Q8BLH7 601 aa15.76■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Senp3Q9EP97 568 aaKnown RBP15.76■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Prdm11A2AGX3 565 aa15.75■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Supt5hO55201 1082 aaKnown RBP15.75■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Nlrp3Q8R4B8 1033 aa15.75■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Casz1Q9CWL2 1761 aa15.75■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Strn4P58404 760 aa15.74■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Ksr2Q3UVC0 959 aa15.74■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Vamp4O70480 141 aa15.73■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Fkbp1aP26883 108 aaKnown RBP15.73■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 CoilQ5SU73 570 aa15.73■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Rad21Q61550 635 aaKnown RBP15.73■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Ssc5dQ8BV57 1371 aa15.73■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Rad23bP54728 416 aa15.72■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Zfp444Q3TDV8 331 aaKnown RBP15.72■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Usp21Q9QZL6 566 aa15.72■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Duox1A2AQ92 1551 aa15.71■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Igfbp6P47880 238 aa15.71■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Chl1P70232 1209 aa15.71■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Rtkn2Q14B46 604 aa15.71■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Ppm1fQ8CGA0 452 aa15.71■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Ccar1Q8CH18 1146 aaKnown RBP15.71■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 NgdnQ9DB96 315 aaKnown RBP15.71■□□□□ 0.11
Ccdc28a-203ENSMUST00000173243 Itgb4A2A863 1818 aa15.71■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Ttll7A4Q9F0 912 aa15.7■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Npy5rO70342 466 aa15.7■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Ifit1bl2Q3U687 466 aa15.7■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Tango6Q8C3S2 1079 aa15.7■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Tktl2Q9D4D4 627 aa15.7■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Zbtb40Q6PCS8 1258 aa15.69■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 KarsQ99MN1 595 aaKnown RBP15.69■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Flt4P35917 1363 aa15.69■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Frmpd3A0A140LIW3 1774 aa15.69■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Ccdc171E9Q1U1 1324 aa15.68■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Irf9Q61179 399 aa15.68■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Arid3aQ62431 601 aa15.68■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Cavin2Q63918 418 aaKnown RBP15.68■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Gimap8Q75N62 688 aa15.68■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Sgip1Q8VD37 806 aa15.68■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Trim34aQ99PP6 485 aa15.68■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Echdc1Q9D9V3 322 aa15.68■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Gas2l2Q5SSG4 860 aa15.67■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Camkk2Q8C078 588 aa15.67■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Arap2Q8BZ05 1703 aa15.67■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Mrc1Q61830 1456 aa15.66■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Zc3h12cQ5DTV4 884 aa15.66■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Ank1Q02357 1862 aa15.65■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Ofd1Q80Z25 1017 aa15.65■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Sv2bQ8BG39 683 aa15.65■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 IarsQ8BU30 1262 aa15.65■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 AbraQ8BUZ1 375 aa15.65■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Mapk8ip1Q9WVI9 707 aa15.65■□□□□ 0.1
Ccdc28a-203ENSMUST00000173243 Kif13bA0A286YCV9 1847 aa15.64■□□□□ 0.09
Ccdc28a-203ENSMUST00000173243 Gm6268A2A3U9 297 aa15.64■□□□□ 0.09
Ccdc28a-203ENSMUST00000173243 Pde4bB1AWC9 736 aa15.64■□□□□ 0.09
Ccdc28a-203ENSMUST00000173243 Stox1B2RQL2 990 aa15.64■□□□□ 0.09
Ccdc28a-203ENSMUST00000173243 Hsp90ab1P11499 724 aaKnown RBP15.64■□□□□ 0.09
Ccdc28a-203ENSMUST00000173243 Lmnb1P14733 588 aaKnown RBP15.64■□□□□ 0.09
Ccdc28a-203ENSMUST00000173243 Rnf180Q3U827 592 aa15.64■□□□□ 0.09
Ccdc28a-203ENSMUST00000173243 Cyp2c67Q569X9 491 aa15.64■□□□□ 0.09
Ccdc28a-203ENSMUST00000173243 Taf1dQ9D4V4 322 aa15.64■□□□□ 0.09
Ccdc28a-203ENSMUST00000173243 Ankrd31A0A140LI88 1765 aa15.63■□□□□ 0.09
Ccdc28a-203ENSMUST00000173243 Cyp2c23E9Q5K4 494 aa15.63■□□□□ 0.09
Ccdc28a-203ENSMUST00000173243 Fam83gQ5SWY7 812 aa15.63■□□□□ 0.09
Ccdc28a-203ENSMUST00000173243 St5Q924W7 1134 aa15.63■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms